RNA–Protein interactions for RNA: ENST00000472218.1

RPS18-231, Transcript of ribosomal protein S18, human

TSL 2

Gene RPS18, Length 1,109 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RPS18-231	ENST00000472218	TMEM39B	Q9GZU3	492 aa		12.53	□□□□□ -0.4
RPS18-231	ENST00000472218	SH2D4A	Q9H788	454 aa		12.53	□□□□□ -0.4
RPS18-231	ENST00000472218	SHTN1	A0MZ66	631 aa		12.52	□□□□□ -0.41
RPS18-231	ENST00000472218	VPS37C	A5D8V6	355 aa	Predicted RBP	12.52	□□□□□ -0.41
RPS18-231	ENST00000472218	hCG_1984214	I3L0E3	225 aa		12.52	□□□□□ -0.41
RPS18-231	ENST00000472218	MPHOSPH10	O00566	681 aa	Known RBP	12.52	□□□□□ -0.41
RPS18-231	ENST00000472218	DDN	O94850	711 aa	Predicted RBP	12.52	□□□□□ -0.41
RPS18-231	ENST00000472218	BAG4	O95429	457 aa	Known RBP	12.52	□□□□□ -0.41
RPS18-231	ENST00000472218	EGFR	P00533	1210 aa		12.52	□□□□□ -0.41
RPS18-231	ENST00000472218	EPS15	P42566	896 aa		12.52	□□□□□ -0.41
RPS18-231	ENST00000472218	ICA1	Q05084	483 aa		12.52	□□□□□ -0.41
RPS18-231	ENST00000472218	BRAP	Q7Z569	592 aa		12.52	□□□□□ -0.41
RPS18-231	ENST00000472218	ZNF713	Q8N859	430 aa	Predicted RBP	12.52	□□□□□ -0.41
RPS18-231	ENST00000472218	DCAF4	Q8WV16	495 aa		12.52	□□□□□ -0.41
RPS18-231	ENST00000472218	ALG1	Q9BT22	464 aa		12.52	□□□□□ -0.41
RPS18-231	ENST00000472218	SLC26A6	Q9BXS9	759 aa		12.52	□□□□□ -0.41
RPS18-231	ENST00000472218	SH3GLB2	Q9NR46	395 aa		12.52	□□□□□ -0.41
RPS18-231	ENST00000472218	CLIP2	Q9UDT6	1046 aa		12.52	□□□□□ -0.41
RPS18-231	ENST00000472218	MAD2L2	Q9UI95	211 aa		12.52	□□□□□ -0.41
RPS18-231	ENST00000472218	CTNND1	O60716	968 aa	Known RBP	12.51	□□□□□ -0.41
RPS18-231	ENST00000472218	PDHB	P11177	359 aa		12.51	□□□□□ -0.41
RPS18-231	ENST00000472218	RXRA	P19793	462 aa		12.51	□□□□□ -0.41
RPS18-231	ENST00000472218	CAP2	P40123	477 aa		12.51	□□□□□ -0.41
RPS18-231	ENST00000472218	SAFB	Q15424	915 aa	Known RBP eCLIP	12.51	□□□□□ -0.41
RPS18-231	ENST00000472218	ANGEL2	Q5VTE6	544 aa	Known RBP	12.51	□□□□□ -0.41
RPS18-231	ENST00000472218	TEX2	Q8IWB9	1127 aa		12.51	□□□□□ -0.41
RPS18-231	ENST00000472218	CCDC144CP	Q8IYA2	1237 aa		12.51	□□□□□ -0.41
RPS18-231	ENST00000472218	TRPM4	Q8TD43	1214 aa		12.51	□□□□□ -0.41
RPS18-231	ENST00000472218	GMCL1	Q96IK5	515 aa		12.51	□□□□□ -0.41
RPS18-231	ENST00000472218	ZNF341	Q9BYN7	854 aa		12.51	□□□□□ -0.41
RPS18-231	ENST00000472218	ARHGEF10L	Q9HCE6	1279 aa		12.51	□□□□□ -0.41
RPS18-231	ENST00000472218	ZNF112	Q9UJU3	913 aa		12.51	□□□□□ -0.41
RPS18-231	ENST00000472218	PHF20L1	A8MW92	1017 aa		12.5	□□□□□ -0.41
RPS18-231	ENST00000472218	KLRF2	D3W0D1	207 aa		12.5	□□□□□ -0.41
RPS18-231	ENST00000472218	GH2	P01242	217 aa		12.5	□□□□□ -0.41
RPS18-231	ENST00000472218	GUCY1A2	P33402	732 aa		12.5	□□□□□ -0.41
RPS18-231	ENST00000472218	HIRA	P54198	1017 aa	Predicted RBP	12.5	□□□□□ -0.41
RPS18-231	ENST00000472218	PFKFB3	Q16875	520 aa	Predicted RBP	12.5	□□□□□ -0.41
RPS18-231	ENST00000472218	GALNT17	Q6IS24	598 aa		12.5	□□□□□ -0.41
RPS18-231	ENST00000472218	CDC37L1	Q7L3B6	337 aa		12.5	□□□□□ -0.41
RPS18-231	ENST00000472218	PNMA8A	Q86V59	439 aa	Predicted RBP	12.5	□□□□□ -0.41
RPS18-231	ENST00000472218	RAB11FIP4	Q86YS3	637 aa		12.5	□□□□□ -0.41
RPS18-231	ENST00000472218	SRBD1	Q8N5C6	995 aa	Known RBP	12.5	□□□□□ -0.41
RPS18-231	ENST00000472218	TMEM87A	Q8NBN3	555 aa		12.5	□□□□□ -0.41
RPS18-231	ENST00000472218	PHKB	Q93100	1093 aa		12.5	□□□□□ -0.41
RPS18-231	ENST00000472218	DCPS	Q96C86	337 aa	Known RBP	12.5	□□□□□ -0.41
RPS18-231	ENST00000472218	GGA3	Q9NZ52	723 aa		12.5	□□□□□ -0.41
RPS18-231	ENST00000472218	ZBTB21	Q9ULJ3	1066 aa		12.5	□□□□□ -0.41
RPS18-231	ENST00000472218	CNTNAP5	Q8WYK1	1306 aa		12.5	□□□□□ -0.41
RPS18-231	ENST00000472218	GREB1L	Q9C091	1923 aa	Predicted RBP	12.5	□□□□□ -0.41
RPS18-231	ENST00000472218	PLA2G6	O60733	806 aa		12.49	□□□□□ -0.41
RPS18-231	ENST00000472218	PLEKHA8P1	O95397	391 aa		12.49	□□□□□ -0.41
RPS18-231	ENST00000472218	EEF2	P13639	858 aa	Known RBP	12.49	□□□□□ -0.41
RPS18-231	ENST00000472218	CALML3	P27482	149 aa		12.49	□□□□□ -0.41
RPS18-231	ENST00000472218	KRT85	P78386	507 aa		12.49	□□□□□ -0.41
RPS18-231	ENST00000472218	ZNF543	Q08ER8	600 aa		12.49	□□□□□ -0.41
RPS18-231	ENST00000472218	REST	Q13127	1097 aa		12.49	□□□□□ -0.41
RPS18-231	ENST00000472218	SEPT2	Q15019	361 aa		12.49	□□□□□ -0.41
RPS18-231	ENST00000472218	SKOR2	Q2VWA4	1001 aa	Predicted RBP	12.49	□□□□□ -0.41
RPS18-231	ENST00000472218	SULF1	Q8IWU6	871 aa		12.49	□□□□□ -0.41
RPS18-231	ENST00000472218	CCDC12	Q8WUD4	166 aa	Predicted RBP	12.49	□□□□□ -0.41
RPS18-231	ENST00000472218	ANP32E	Q9BTT0	268 aa		12.49	□□□□□ -0.41
RPS18-231	ENST00000472218	SCAND2P	Q9GZW5	306 aa	Predicted RBP	12.49	□□□□□ -0.41
RPS18-231	ENST00000472218	FOXP1	Q9H334	677 aa	Predicted RBP	12.49	□□□□□ -0.41
RPS18-231	ENST00000472218	RIOX1	Q9H6W3	641 aa		12.49	□□□□□ -0.41
RPS18-231	ENST00000472218	CFAP45	Q9UL16	551 aa		12.49	□□□□□ -0.41
RPS18-231	ENST00000472218	TMX2	Q9Y320	296 aa		12.49	□□□□□ -0.41
RPS18-231	ENST00000472218		V9GY48	417 aa	Predicted RBP	12.49	□□□□□ -0.41
RPS18-231	ENST00000472218	SIPA1L1	O43166	1804 aa		12.48	□□□□□ -0.41
RPS18-231	ENST00000472218	FAM196B	A6NMK8	535 aa		12.48	□□□□□ -0.41
RPS18-231	ENST00000472218	SCG2	P13521	617 aa		12.48	□□□□□ -0.41
RPS18-231	ENST00000472218	U2AF2	P26368	475 aa	Known RBP eCLIP	12.48	□□□□□ -0.41
RPS18-231	ENST00000472218	EPHX2	P34913	555 aa		12.48	□□□□□ -0.41
RPS18-231	ENST00000472218	TRAF1	Q13077	416 aa		12.48	□□□□□ -0.41
RPS18-231	ENST00000472218	PKN1	Q16512	942 aa		12.48	□□□□□ -0.41
RPS18-231	ENST00000472218	KRT40	Q6A162	431 aa		12.48	□□□□□ -0.41
RPS18-231	ENST00000472218	USP48	Q86UV5	1035 aa		12.48	□□□□□ -0.41
RPS18-231	ENST00000472218	SIAH1	Q8IUQ4	282 aa		12.48	□□□□□ -0.41
RPS18-231	ENST00000472218	CCDC148	Q8NFR7	591 aa		12.48	□□□□□ -0.41
RPS18-231	ENST00000472218	RRP36	Q96EU6	259 aa	Known RBP	12.48	□□□□□ -0.41
RPS18-231	ENST00000472218	ZNF396	Q96N95	335 aa	Predicted RBP	12.48	□□□□□ -0.41
RPS18-231	ENST00000472218	BRMS1	Q9HCU9	246 aa		12.48	□□□□□ -0.41
RPS18-231	ENST00000472218	GOPC	Q9HD26	462 aa		12.48	□□□□□ -0.41
RPS18-231	ENST00000472218	ELP1	O95163	1332 aa		12.47	□□□□□ -0.41
RPS18-231	ENST00000472218	UNCX	A6NJT0	531 aa		12.47	□□□□□ -0.41
RPS18-231	ENST00000472218	USP17L5	A8MUK1	530 aa		12.47	□□□□□ -0.41
RPS18-231	ENST00000472218	GDF11	O95390	407 aa		12.47	□□□□□ -0.41
RPS18-231	ENST00000472218	MMP1	P03956	469 aa		12.47	□□□□□ -0.41
RPS18-231	ENST00000472218	SLC1A4	P43007	532 aa		12.47	□□□□□ -0.41
RPS18-231	ENST00000472218	KIF23	Q02241	960 aa	Predicted RBP	12.47	□□□□□ -0.41
RPS18-231	ENST00000472218	NOL9	Q5SY16	702 aa	Known RBP	12.47	□□□□□ -0.41
RPS18-231	ENST00000472218	SLFN13	Q68D06	897 aa		12.47	□□□□□ -0.41
RPS18-231	ENST00000472218	BTNL9	Q6UXG8	535 aa		12.47	□□□□□ -0.41
RPS18-231	ENST00000472218	LRRC47	Q8N1G4	583 aa	Known RBP	12.47	□□□□□ -0.41
RPS18-231	ENST00000472218	STAG2	Q8N3U4	1231 aa		12.47	□□□□□ -0.41
RPS18-231	ENST00000472218	LPAR1	Q92633	364 aa		12.47	□□□□□ -0.41
RPS18-231	ENST00000472218	GLT8D2	Q9H1C3	349 aa		12.47	□□□□□ -0.41
RPS18-231	ENST00000472218	SEC63	Q9UGP8	760 aa	Known RBP	12.47	□□□□□ -0.41
RPS18-231	ENST00000472218	ESYT2	A0FGR8	921 aa		12.46	□□□□□ -0.41
RPS18-231	ENST00000472218		F5H6K3	240 aa		12.46	□□□□□ -0.41

Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms