RNA–Protein interactions for RNA: ENST00000471235.1

HDAC7-220, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 1,012 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-220ENST00000471235 COL13A1Q5TAT6 717 aaPredicted RBP23.37■■□□□ 1.33
HDAC7-220ENST00000471235 KIAA1211Q6ZU35 1233 aa23.37■■□□□ 1.33
HDAC7-220ENST00000471235 SMCR8Q8TEV9 937 aaPredicted RBP23.37■■□□□ 1.33
HDAC7-220ENST00000471235 RBM8AQ9Y5S9 174 aaKnown RBP23.37■■□□□ 1.33
HDAC7-220ENST00000471235 NMT2O60551 498 aa23.36■■□□□ 1.33
HDAC7-220ENST00000471235 TTLL1O95922 423 aa23.36■■□□□ 1.33
HDAC7-220ENST00000471235 CYP21A2P08686 494 aa23.36■■□□□ 1.33
HDAC7-220ENST00000471235 BCRP11274 1271 aa23.36■■□□□ 1.33
HDAC7-220ENST00000471235 SP3Q02447 781 aa23.36■■□□□ 1.33
HDAC7-220ENST00000471235 LPAR1Q92633 364 aa23.36■■□□□ 1.33
HDAC7-220ENST00000471235 RPAP3Q9H6T3 665 aaPredicted RBP23.36■■□□□ 1.33
HDAC7-220ENST00000471235 ANO2Q9NQ90 1003 aa23.36■■□□□ 1.33
HDAC7-220ENST00000471235 IL17RBQ9NRM6 502 aa23.36■■□□□ 1.33
HDAC7-220ENST00000471235 CLIP2Q9UDT6 1046 aa23.36■■□□□ 1.33
HDAC7-220ENST00000471235 USP17L15C9J2P7 530 aa23.35■■□□□ 1.33
HDAC7-220ENST00000471235 USP17L13C9JLJ4 530 aa23.35■■□□□ 1.33
HDAC7-220ENST00000471235 USP17L11C9JVI0 530 aa23.35■■□□□ 1.33
HDAC7-220ENST00000471235 USP17L18D6R9N7 530 aa23.35■■□□□ 1.33
HDAC7-220ENST00000471235 USP17L22D6RA61 530 aa23.35■■□□□ 1.33
HDAC7-220ENST00000471235 USP17L17D6RBQ6 530 aa23.35■■□□□ 1.33
HDAC7-220ENST00000471235 USP17L19D6RCP7 530 aa23.35■■□□□ 1.33
HDAC7-220ENST00000471235 USP17L20D6RJB6 530 aa23.35■■□□□ 1.33
HDAC7-220ENST00000471235 USP17L24Q0WX57 530 aa23.35■■□□□ 1.33
HDAC7-220ENST00000471235 SPICE1Q8N0Z3 855 aa23.35■■□□□ 1.33
HDAC7-220ENST00000471235 LRRC47Q8N1G4 583 aaKnown RBP23.35■■□□□ 1.33
HDAC7-220ENST00000471235 CD99L2Q8TCZ2 262 aa23.35■■□□□ 1.33
HDAC7-220ENST00000471235 GOPCQ9HD26 462 aa23.35■■□□□ 1.33
HDAC7-220ENST00000471235 PLXNB2O15031 1838 aa23.34■■□□□ 1.33
HDAC7-220ENST00000471235 HERVK_113P62684 666 aa23.34■■□□□ 1.33
HDAC7-220ENST00000471235 CAP1Q01518 475 aa23.34■■□□□ 1.33
HDAC7-220ENST00000471235 CATSPERGQ6ZRH7 1159 aa23.34■■□□□ 1.33
HDAC7-220ENST00000471235 ESR2Q92731 530 aa23.34■■□□□ 1.33
HDAC7-220ENST00000471235 MKL1Q969V6 931 aa23.34■■□□□ 1.33
HDAC7-220ENST00000471235 ERO1AQ96HE7 468 aa23.34■■□□□ 1.33
HDAC7-220ENST00000471235 TAF6LQ9Y6J9 622 aa23.34■■□□□ 1.33
HDAC7-220ENST00000471235 B4E1Z4 1266 aa23.33■■□□□ 1.33
HDAC7-220ENST00000471235 WDR46O15213 610 aaKnown RBP23.33■■□□□ 1.33
HDAC7-220ENST00000471235 NOVP48745 357 aa23.33■■□□□ 1.33
HDAC7-220ENST00000471235 PPP4R3BQ5MIZ7 849 aa23.33■■□□□ 1.33
HDAC7-220ENST00000471235 P2RX7Q99572 595 aaKnown RBP23.33■■□□□ 1.33
HDAC7-220ENST00000471235 TANGO6Q9C0B7 1094 aa23.33■■□□□ 1.33
HDAC7-220ENST00000471235 SYNPO2Q9UMS6 1093 aa23.33■■□□□ 1.33
HDAC7-220ENST00000471235 RAD21O60216 631 aa23.32■■□□□ 1.32
HDAC7-220ENST00000471235 KDM4AO75164 1064 aa23.32■■□□□ 1.32
HDAC7-220ENST00000471235 NDUFB10O96000 172 aa23.32■■□□□ 1.32
HDAC7-220ENST00000471235 GCLCP48506 637 aaPredicted RBP23.32■■□□□ 1.32
HDAC7-220ENST00000471235 NT5C2P49902 561 aa23.32■■□□□ 1.32
HDAC7-220ENST00000471235 CNNM2Q9H8M5 875 aa23.32■■□□□ 1.32
HDAC7-220ENST00000471235 TCP11L1Q9NUJ3 509 aa23.32■■□□□ 1.32
HDAC7-220ENST00000471235 STX8Q9UNK0 236 aa23.32■■□□□ 1.32
HDAC7-220ENST00000471235 LACTBP83111 547 aaPredicted RBP23.31■■□□□ 1.32
HDAC7-220ENST00000471235 FAM110CQ1W6H9 321 aa23.31■■□□□ 1.32
HDAC7-220ENST00000471235 STOX1Q6ZVD7 989 aa23.31■■□□□ 1.32
HDAC7-220ENST00000471235 CTU1Q7Z7A3 348 aaKnown RBP23.31■■□□□ 1.32
HDAC7-220ENST00000471235 ANKRD13CQ8N6S4 541 aa23.31■■□□□ 1.32
HDAC7-220ENST00000471235 GMCL1P1Q8NEA9 526 aa23.31■■□□□ 1.32
HDAC7-220ENST00000471235 KRT23Q9C075 422 aa23.31■■□□□ 1.32
HDAC7-220ENST00000471235 ARHGAP39Q9C0H5 1083 aa23.31■■□□□ 1.32
HDAC7-220ENST00000471235 SPDYE16A6NNV3 312 aaPredicted RBP23.3■■□□□ 1.32
HDAC7-220ENST00000471235 F5H6K3 240 aa23.3■■□□□ 1.32
HDAC7-220ENST00000471235 KLRC3Q07444 240 aa23.3■■□□□ 1.32
HDAC7-220ENST00000471235 FAM83BQ5T0W9 1011 aa23.3■■□□□ 1.32
HDAC7-220ENST00000471235 POTEEQ6S8J3 1075 aa23.3■■□□□ 1.32
HDAC7-220ENST00000471235 NUP88Q99567 741 aaPredicted RBP23.3■■□□□ 1.32
HDAC7-220ENST00000471235 E7EWF7 191 aa23.29■■□□□ 1.32
HDAC7-220ENST00000471235 CTGFP29279 349 aa23.29■■□□□ 1.32
HDAC7-220ENST00000471235 GTF3C2Q8WUA4 911 aaPredicted RBP23.29■■□□□ 1.32
HDAC7-220ENST00000471235 ZKSCAN3Q9BRR0 538 aa23.29■■□□□ 1.32
HDAC7-220ENST00000471235 TXNRD2Q9NNW7 524 aa23.29■■□□□ 1.32
HDAC7-220ENST00000471235 MORF4L1Q9UBU8 362 aa23.29■■□□□ 1.32
HDAC7-220ENST00000471235 MYH6P13533 1939 aa23.28■■□□□ 1.32
HDAC7-220ENST00000471235 SLC27A2O14975 620 aa23.28■■□□□ 1.32
HDAC7-220ENST00000471235 PEX10O60683 326 aa23.28■■□□□ 1.32
HDAC7-220ENST00000471235 NECTIN1Q15223 517 aa23.28■■□□□ 1.32
HDAC7-220ENST00000471235 CREB3L3Q68CJ9 461 aa23.28■■□□□ 1.32
HDAC7-220ENST00000471235 RCSD1Q6JBY9 416 aa23.28■■□□□ 1.32
HDAC7-220ENST00000471235 LBX2Q6XYB7 198 aa23.28■■□□□ 1.32
HDAC7-220ENST00000471235 ZSWIM5Q9P217 1185 aa23.28■■□□□ 1.32
HDAC7-220ENST00000471235 FLOT1O75955 427 aa23.27■■□□□ 1.32
HDAC7-220ENST00000471235 ECM2O94769 699 aaPredicted RBP23.27■■□□□ 1.32
HDAC7-220ENST00000471235 KIF22Q14807 665 aa23.27■■□□□ 1.32
HDAC7-220ENST00000471235 SLFN13Q68D06 897 aa23.27■■□□□ 1.32
HDAC7-220ENST00000471235 CYB5R4Q7L1T6 521 aa23.27■■□□□ 1.32
HDAC7-220ENST00000471235 RASGRP2Q7LDG7 609 aa23.27■■□□□ 1.32
HDAC7-220ENST00000471235 OTOP1Q7RTM1 612 aa23.27■■□□□ 1.32
HDAC7-220ENST00000471235 TMEM47Q9BQJ4 181 aa23.27■■□□□ 1.32
HDAC7-220ENST00000471235 PAGR1Q9BTK6 254 aa23.27■■□□□ 1.32
HDAC7-220ENST00000471235 FBXO28Q9NVF7 368 aa23.27■■□□□ 1.32
HDAC7-220ENST00000471235 RBPJLQ9UBG7 517 aa23.27■■□□□ 1.32
HDAC7-220ENST00000471235 TRIM17Q9Y577 477 aa23.27■■□□□ 1.32
HDAC7-220ENST00000471235 ZNFX1Q9P2E3 1918 aaKnown RBP23.27■■□□□ 1.32
HDAC7-220ENST00000471235 MYPNQ86TC9 1320 aa23.27■■□□□ 1.32
HDAC7-220ENST00000471235 CNMDO75829 334 aa23.26■■□□□ 1.31
HDAC7-220ENST00000471235 TOP1P11387 765 aaKnown RBP23.26■■□□□ 1.31
HDAC7-220ENST00000471235 TRDNQ13061 729 aa23.26■■□□□ 1.31
HDAC7-220ENST00000471235 COG2Q14746 738 aa23.26■■□□□ 1.31
HDAC7-220ENST00000471235 IQCA1Q86XH1 822 aa23.26■■□□□ 1.31
HDAC7-220ENST00000471235 EFCC1Q9HA90 598 aa23.26■■□□□ 1.31
HDAC7-220ENST00000471235 ZNF236Q9UL36 1845 aa23.26■■□□□ 1.31
HDAC7-220ENST00000471235 DSG3P32926 999 aa23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms