RNA–Protein interactions for RNA: ENST00000470723.5

SND1-209, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-209ENST00000470723 TMEM87BQ96K49 555 aa14.87□□□□□ -0.03
SND1-209ENST00000470723 PTPN18Q99952 460 aa14.87□□□□□ -0.03
SND1-209ENST00000470723 SH2D4AQ9H788 454 aa14.87□□□□□ -0.03
SND1-209ENST00000470723 ZCCHC17Q9NP64 241 aaKnown RBP14.87□□□□□ -0.03
SND1-209ENST00000470723 PRDM10Q9NQV6 1147 aa14.87□□□□□ -0.03
SND1-209ENST00000470723 PTPRFP10586 1907 aa14.86□□□□□ -0.03
SND1-209ENST00000470723 TRIM75PA6NK02 468 aa14.86□□□□□ -0.03
SND1-209ENST00000470723 TOP1P11387 765 aaKnown RBP14.86□□□□□ -0.03
SND1-209ENST00000470723 HOXA7P31268 230 aaPredicted RBP14.86□□□□□ -0.03
SND1-209ENST00000470723 LIFRP42702 1097 aa14.86□□□□□ -0.03
SND1-209ENST00000470723 GMCL1P1Q8NEA9 526 aa14.86□□□□□ -0.03
SND1-209ENST00000470723 IL27Q8NEV9 243 aa14.86□□□□□ -0.03
SND1-209ENST00000470723 BRI3BPQ8WY22 251 aa14.86□□□□□ -0.03
SND1-209ENST00000470723 LPAR1Q92633 364 aa14.86□□□□□ -0.03
SND1-209ENST00000470723 TMEM47Q9BQJ4 181 aa14.86□□□□□ -0.03
SND1-209ENST00000470723 C22orf23Q9BZE7 217 aa14.86□□□□□ -0.03
SND1-209ENST00000470723 ALDH8A1Q9H2A2 487 aaPredicted RBP14.86□□□□□ -0.03
SND1-209ENST00000470723 VCPKMTQ9H867 229 aa14.86□□□□□ -0.03
SND1-209ENST00000470723 SLC45A1Q9Y2W3 748 aa14.86□□□□□ -0.03
SND1-209ENST00000470723 F5H6K3 240 aa14.85□□□□□ -0.03
SND1-209ENST00000470723 AOC2O75106 756 aa14.85□□□□□ -0.03
SND1-209ENST00000470723 CTCFP49711 727 aaPredicted RBP14.85□□□□□ -0.03
SND1-209ENST00000470723 KLRC3Q07444 240 aa14.85□□□□□ -0.03
SND1-209ENST00000470723 MTMR2Q13614 643 aa14.85□□□□□ -0.03
SND1-209ENST00000470723 KIAA1755Q5JYT7 1200 aa14.85□□□□□ -0.03
SND1-209ENST00000470723 RUFY3Q7L099 469 aa14.85□□□□□ -0.03
SND1-209ENST00000470723 ANKRD23Q86SG2 305 aa14.85□□□□□ -0.03
SND1-209ENST00000470723 CLEC10AQ8IUN9 316 aa14.85□□□□□ -0.03
SND1-209ENST00000470723 KIF2CQ99661 725 aa14.85□□□□□ -0.03
SND1-209ENST00000470723 AGXT2Q9BYV1 514 aa14.85□□□□□ -0.03
SND1-209ENST00000470723 CCL15-CCL14A0A0B4J2E2 113 aa14.84□□□□□ -0.03
SND1-209ENST00000470723 IFIT3O14879 490 aaKnown RBP14.84□□□□□ -0.03
SND1-209ENST00000470723 PRC1O43663 620 aa14.84□□□□□ -0.03
SND1-209ENST00000470723 RPS6KB1P23443 525 aa14.84□□□□□ -0.03
SND1-209ENST00000470723 HMGCS2P54868 508 aa14.84□□□□□ -0.03
SND1-209ENST00000470723 SREBF2Q12772 1141 aa14.84□□□□□ -0.03
SND1-209ENST00000470723 SART3Q15020 963 aaKnown RBP14.84□□□□□ -0.03
SND1-209ENST00000470723 CCL15Q16663 113 aa14.84□□□□□ -0.03
SND1-209ENST00000470723 SGMS1Q86VZ5 419 aa14.84□□□□□ -0.03
SND1-209ENST00000470723 IFNL1Q8IU54 200 aa14.84□□□□□ -0.03
SND1-209ENST00000470723 JAKMIP1Q96N16 626 aaKnown RBP14.84□□□□□ -0.03
SND1-209ENST00000470723 ZKSCAN3Q9BRR0 538 aa14.84□□□□□ -0.03
SND1-209ENST00000470723 UBAC1Q9BSL1 405 aa14.84□□□□□ -0.03
SND1-209ENST00000470723 STX8Q9UNK0 236 aa14.84□□□□□ -0.03
SND1-209ENST00000470723 TNKSO95271 1327 aa14.84□□□□□ -0.03
SND1-209ENST00000470723 MYH4Q9Y623 1939 aa14.84□□□□□ -0.03
SND1-209ENST00000470723 BTBD19C9JJ37 291 aa14.83□□□□□ -0.04
SND1-209ENST00000470723 PLA2G6O60733 806 aa14.83□□□□□ -0.04
SND1-209ENST00000470723 SNHG28P0DPA3 235 aa14.83□□□□□ -0.04
SND1-209ENST00000470723 EVCP57679 992 aa14.83□□□□□ -0.04
SND1-209ENST00000470723 MKRN3Q13064 507 aaKnown RBP14.83□□□□□ -0.04
SND1-209ENST00000470723 BLOC1S2Q6QNY1 142 aa14.83□□□□□ -0.04
SND1-209ENST00000470723 PAXIP1Q6ZW49 1069 aaPredicted RBP14.83□□□□□ -0.04
SND1-209ENST00000470723 CHST3Q7LGC8 479 aa14.83□□□□□ -0.04
SND1-209ENST00000470723 GMCL1Q96IK5 515 aa14.83□□□□□ -0.04
SND1-209ENST00000470723 TBC1D32Q96NH3 1257 aa14.83□□□□□ -0.04
SND1-209ENST00000470723 CFHR5Q9BXR6 569 aa14.83□□□□□ -0.04
SND1-209ENST00000470723 UPF2Q9HAU5 1272 aaKnown RBP14.83□□□□□ -0.04
SND1-209ENST00000470723 LY9Q9HBG7 655 aa14.83□□□□□ -0.04
SND1-209ENST00000470723 GOPCQ9HD26 462 aa14.83□□□□□ -0.04
SND1-209ENST00000470723 TMOD4Q9NZQ9 345 aa14.83□□□□□ -0.04
SND1-209ENST00000470723 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.83□□□□□ -0.04
SND1-209ENST00000470723 AGTPBP1Q9UPW5 1226 aa14.83□□□□□ -0.04
SND1-209ENST00000470723 CYP46A1Q9Y6A2 500 aa14.83□□□□□ -0.04
SND1-209ENST00000470723 ERICH2A1L162 156 aa14.82□□□□□ -0.04
SND1-209ENST00000470723 IGF2BP3O00425 579 aaKnown RBP eCLIP14.82□□□□□ -0.04
SND1-209ENST00000470723 SH2B2O14492 632 aaPredicted RBP14.82□□□□□ -0.04
SND1-209ENST00000470723 FOXN1O15353 648 aa14.82□□□□□ -0.04
SND1-209ENST00000470723 ALDH1A1P00352 501 aa14.82□□□□□ -0.04
SND1-209ENST00000470723 CASTP20810 708 aaKnown RBP14.82□□□□□ -0.04
SND1-209ENST00000470723 ATP2B2Q01814 1243 aa14.82□□□□□ -0.04
SND1-209ENST00000470723 WTAPQ15007 396 aa14.82□□□□□ -0.04
SND1-209ENST00000470723 TMEM67Q5HYA8 995 aa14.82□□□□□ -0.04
SND1-209ENST00000470723 IFIT1BQ5T764 474 aaKnown RBP14.82□□□□□ -0.04
SND1-209ENST00000470723 OTUD7BQ6GQQ9 843 aa14.82□□□□□ -0.04
SND1-209ENST00000470723 CATSPERGQ6ZRH7 1159 aa14.82□□□□□ -0.04
SND1-209ENST00000470723 MAP3K14Q99558 947 aa14.82□□□□□ -0.04
SND1-209ENST00000470723 FEZ1Q99689 392 aa14.82□□□□□ -0.04
SND1-209ENST00000470723 USP17L15C9J2P7 530 aa14.81□□□□□ -0.04
SND1-209ENST00000470723 USP17L13C9JLJ4 530 aa14.81□□□□□ -0.04
SND1-209ENST00000470723 USP17L11C9JVI0 530 aa14.81□□□□□ -0.04
SND1-209ENST00000470723 USP17L18D6R9N7 530 aa14.81□□□□□ -0.04
SND1-209ENST00000470723 USP17L22D6RA61 530 aa14.81□□□□□ -0.04
SND1-209ENST00000470723 USP17L17D6RBQ6 530 aa14.81□□□□□ -0.04
SND1-209ENST00000470723 USP17L19D6RCP7 530 aa14.81□□□□□ -0.04
SND1-209ENST00000470723 USP17L20D6RJB6 530 aa14.81□□□□□ -0.04
SND1-209ENST00000470723 WDR46O15213 610 aaKnown RBP14.81□□□□□ -0.04
SND1-209ENST00000470723 NDUFB10O96000 172 aa14.81□□□□□ -0.04
SND1-209ENST00000470723 VCAM1P19320 739 aa14.81□□□□□ -0.04
SND1-209ENST00000470723 USP17L24Q0WX57 530 aa14.81□□□□□ -0.04
SND1-209ENST00000470723 TROAPQ12815 778 aa14.81□□□□□ -0.04
SND1-209ENST00000470723 TREML2Q5T2D2 321 aa14.81□□□□□ -0.04
SND1-209ENST00000470723 SLFN13Q68D06 897 aa14.81□□□□□ -0.04
SND1-209ENST00000470723 FAM43AQ8N2R8 423 aa14.81□□□□□ -0.04
SND1-209ENST00000470723 SENP2Q9HC62 589 aa14.81□□□□□ -0.04
SND1-209ENST00000470723 GPHNQ9NQX3 736 aaPredicted RBP14.81□□□□□ -0.04
SND1-209ENST00000470723 ADAMTS5Q9UNA0 930 aa14.81□□□□□ -0.04
SND1-209ENST00000470723 CCDC85CA6NKD9 419 aa14.8□□□□□ -0.04
SND1-209ENST00000470723 CPA1P15085 419 aa14.8□□□□□ -0.04
SND1-209ENST00000470723 MAP2K1Q02750 393 aaPredicted RBP14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms