RNA–Protein interactions for RNA: ENST00000466780.5

PDZRN3-205, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-205ENST00000466780 LPIN2Q92539 896 aa14.72□□□□□ -0.05
PDZRN3-205ENST00000466780 SLAIN2Q9P270 581 aa14.72□□□□□ -0.05
PDZRN3-205ENST00000466780 MYH6P13533 1939 aa14.71□□□□□ -0.05
PDZRN3-205ENST00000466780 DOCK2Q92608 1830 aa14.71□□□□□ -0.05
PDZRN3-205ENST00000466780 MYH3P11055 1940 aa14.71□□□□□ -0.05
PDZRN3-205ENST00000466780 CASP8Q14790 479 aa14.71□□□□□ -0.05
PDZRN3-205ENST00000466780 WHAMMP3Q1A5X7 153 aa14.71□□□□□ -0.05
PDZRN3-205ENST00000466780 TMTC1Q8IUR5 882 aa14.71□□□□□ -0.05
PDZRN3-205ENST00000466780 ABHD10Q9NUJ1 306 aa14.71□□□□□ -0.05
PDZRN3-205ENST00000466780 LIMA1Q9UHB6 759 aaKnown RBP14.71□□□□□ -0.05
PDZRN3-205ENST00000466780 SLC4A4Q9Y6R1 1079 aa14.71□□□□□ -0.05
PDZRN3-205ENST00000466780 hCG_1642624A0A1W2PR95 340 aa14.71□□□□□ -0.06
PDZRN3-205ENST00000466780 ERICH2A1L162 156 aa14.71□□□□□ -0.06
PDZRN3-205ENST00000466780 CTAGE15A4D2H0 777 aa14.71□□□□□ -0.06
PDZRN3-205ENST00000466780 CTAGE8P0CG41 777 aa14.71□□□□□ -0.06
PDZRN3-205ENST00000466780 CTAGE6Q86UF2 777 aa14.71□□□□□ -0.06
PDZRN3-205ENST00000466780 CTAGE4Q8IX94 777 aa14.71□□□□□ -0.06
PDZRN3-205ENST00000466780 PHF20Q9BVI0 1012 aa14.71□□□□□ -0.06
PDZRN3-205ENST00000466780 RNF26Q9BY78 433 aaPredicted RBP14.71□□□□□ -0.06
PDZRN3-205ENST00000466780 CWC15Q9P013 229 aaKnown RBP14.71□□□□□ -0.06
PDZRN3-205ENST00000466780 ASAP1Q9ULH1 1129 aa14.71□□□□□ -0.06
PDZRN3-205ENST00000466780 COL5A2P05997 1499 aaPredicted RBP14.71□□□□□ -0.06
PDZRN3-205ENST00000466780 SHANK3Q9BYB0 1731 aa14.7□□□□□ -0.06
PDZRN3-205ENST00000466780 XDHP47989 1333 aa14.7□□□□□ -0.06
PDZRN3-205ENST00000466780 PRDM1O75626 825 aa14.7□□□□□ -0.06
PDZRN3-205ENST00000466780 EIF3JO75822 258 aaKnown RBP14.7□□□□□ -0.06
PDZRN3-205ENST00000466780 RCAN1P53805 252 aa14.7□□□□□ -0.06
PDZRN3-205ENST00000466780 TUBB4BP68371 445 aa14.7□□□□□ -0.06
PDZRN3-205ENST00000466780 MAPK8IP2Q13387 824 aaPredicted RBP14.7□□□□□ -0.06
PDZRN3-205ENST00000466780 SEC23AQ15436 765 aa14.7□□□□□ -0.06
PDZRN3-205ENST00000466780 SRLQ86TD4 932 aa14.7□□□□□ -0.06
PDZRN3-205ENST00000466780 TMTC2Q8N394 836 aa14.7□□□□□ -0.06
PDZRN3-205ENST00000466780 LRRC10BA6NIK2 292 aa14.7□□□□□ -0.06
PDZRN3-205ENST00000466780 SMIM22K7EJ46 135 aa14.7□□□□□ -0.06
PDZRN3-205ENST00000466780 FUT2Q10981 343 aa14.7□□□□□ -0.06
PDZRN3-205ENST00000466780 NCAPH2Q6IBW4 605 aa14.7□□□□□ -0.06
PDZRN3-205ENST00000466780 VPS16Q9H269 839 aa14.7□□□□□ -0.06
PDZRN3-205ENST00000466780 BLZF1Q9H2G9 400 aa14.7□□□□□ -0.06
PDZRN3-205ENST00000466780 TOGARAM1Q9Y4F4 1720 aa14.69□□□□□ -0.06
PDZRN3-205ENST00000466780 LRRIQ3A6PVS8 624 aaPredicted RBP14.69□□□□□ -0.06
PDZRN3-205ENST00000466780 N4BP3O15049 544 aa14.69□□□□□ -0.06
PDZRN3-205ENST00000466780 KRT2P35908 639 aa14.69□□□□□ -0.06
PDZRN3-205ENST00000466780 ZNF174Q15697 407 aa14.69□□□□□ -0.06
PDZRN3-205ENST00000466780 C10orf67Q8IYJ2 551 aa14.69□□□□□ -0.06
PDZRN3-205ENST00000466780 FERMT2Q96AC1 680 aa14.69□□□□□ -0.06
PDZRN3-205ENST00000466780 SLF1Q9BQI6 1058 aa14.69□□□□□ -0.06
PDZRN3-205ENST00000466780 MTA3Q9BTC8 594 aa14.69□□□□□ -0.06
PDZRN3-205ENST00000466780 REXO2Q9Y3B8 237 aaKnown RBP14.69□□□□□ -0.06
PDZRN3-205ENST00000466780 PNPLA7Q6ZV29 1317 aa14.69□□□□□ -0.06
PDZRN3-205ENST00000466780 BCORQ6W2J9 1755 aa14.69□□□□□ -0.06
PDZRN3-205ENST00000466780 ARAP2Q8WZ64 1704 aa14.69□□□□□ -0.06
PDZRN3-205ENST00000466780 COPB1P53618 953 aaKnown RBP14.69□□□□□ -0.06
PDZRN3-205ENST00000466780 PIP4K2BP78356 416 aa14.69□□□□□ -0.06
PDZRN3-205ENST00000466780 E2F4Q16254 413 aa14.69□□□□□ -0.06
PDZRN3-205ENST00000466780 FOXR1Q6PIV2 292 aa14.69□□□□□ -0.06
PDZRN3-205ENST00000466780 CYP26C1Q6V0L0 522 aa14.69□□□□□ -0.06
PDZRN3-205ENST00000466780 MIGA1Q8NAN2 632 aa14.69□□□□□ -0.06
PDZRN3-205ENST00000466780 MTRQ99707 1265 aa14.69□□□□□ -0.06
PDZRN3-205ENST00000466780 NACAP1Q9BZK3 213 aa14.69□□□□□ -0.06
PDZRN3-205ENST00000466780 RASSF4Q9H2L5 321 aa14.69□□□□□ -0.06
PDZRN3-205ENST00000466780 TAB2Q9NYJ8 693 aa14.69□□□□□ -0.06
PDZRN3-205ENST00000466780 MYO1AQ9UBC5 1043 aa14.69□□□□□ -0.06
PDZRN3-205ENST00000466780 TRIM10Q9UDY6 481 aa14.69□□□□□ -0.06
PDZRN3-205ENST00000466780 TRMT112Q9UI30 125 aaKnown RBP14.69□□□□□ -0.06
PDZRN3-205ENST00000466780 MYO6Q9UM54 1294 aa14.69□□□□□ -0.06
PDZRN3-205ENST00000466780 RRP15Q9Y3B9 282 aaKnown RBP14.69□□□□□ -0.06
PDZRN3-205ENST00000466780 PDE8AO60658 829 aa14.68□□□□□ -0.06
PDZRN3-205ENST00000466780 NUP88Q99567 741 aaPredicted RBP14.68□□□□□ -0.06
PDZRN3-205ENST00000466780 UBAC1Q9BSL1 405 aa14.68□□□□□ -0.06
PDZRN3-205ENST00000466780 TNKSO95271 1327 aa14.68□□□□□ -0.06
PDZRN3-205ENST00000466780 RPS6KA5O75582 802 aa14.68□□□□□ -0.06
PDZRN3-205ENST00000466780 PPARAQ07869 468 aa14.68□□□□□ -0.06
PDZRN3-205ENST00000466780 NPY5RQ15761 445 aa14.68□□□□□ -0.06
PDZRN3-205ENST00000466780 RRAGBQ5VZM2 374 aa14.68□□□□□ -0.06
PDZRN3-205ENST00000466780 LEKR1Q6ZMV7 388 aa14.68□□□□□ -0.06
PDZRN3-205ENST00000466780 TNFRSF25Q93038 417 aa14.68□□□□□ -0.06
PDZRN3-205ENST00000466780 ZFP91Q96JP5 570 aaPredicted RBP14.68□□□□□ -0.06
PDZRN3-205ENST00000466780 CHP1Q99653 195 aa14.68□□□□□ -0.06
PDZRN3-205ENST00000466780 SOS2Q07890 1332 aaPredicted RBP14.68□□□□□ -0.06
PDZRN3-205ENST00000466780 LRP5O75197 1615 aa14.68□□□□□ -0.06
PDZRN3-205ENST00000466780 MROH5Q6ZUA9 1318 aa14.67□□□□□ -0.06
PDZRN3-205ENST00000466780 PHACTR2O75167 634 aa14.67□□□□□ -0.06
PDZRN3-205ENST00000466780 PLEKHA8P1O95397 391 aa14.67□□□□□ -0.06
PDZRN3-205ENST00000466780 GNAT2P19087 354 aa14.67□□□□□ -0.06
PDZRN3-205ENST00000466780 KRT9P35527 623 aa14.67□□□□□ -0.06
PDZRN3-205ENST00000466780 WDR93Q6P2C0 686 aa14.67□□□□□ -0.06
PDZRN3-205ENST00000466780 PIGBQ92521 554 aa14.67□□□□□ -0.06
PDZRN3-205ENST00000466780 GBP3Q9H0R5 595 aa14.67□□□□□ -0.06
PDZRN3-205ENST00000466780 KAT6BQ8WYB5 2073 aa14.67□□□□□ -0.06
PDZRN3-205ENST00000466780 SLC5A1P13866 664 aa14.67□□□□□ -0.06
PDZRN3-205ENST00000466780 AKAP17AQ02040 695 aaKnown RBP14.67□□□□□ -0.06
PDZRN3-205ENST00000466780 PDXDC2PQ6P474 469 aa14.67□□□□□ -0.06
PDZRN3-205ENST00000466780 FAM71BQ8TC56 605 aa14.67□□□□□ -0.06
PDZRN3-205ENST00000466780 CCDC102AQ96A19 550 aa14.67□□□□□ -0.06
PDZRN3-205ENST00000466780 RNF41Q9H4P4 317 aaPredicted RBP14.67□□□□□ -0.06
PDZRN3-205ENST00000466780 RWDD2AQ9UIY3 292 aa14.67□□□□□ -0.06
PDZRN3-205ENST00000466780 V9GY48 417 aaPredicted RBP14.67□□□□□ -0.06
PDZRN3-205ENST00000466780 PRPF3O43395 683 aaKnown RBP14.66□□□□□ -0.06
PDZRN3-205ENST00000466780 ATP2C1P98194 919 aaPredicted RBP14.66□□□□□ -0.06
PDZRN3-205ENST00000466780 PTGDRQ13258 359 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms