RNA–Protein interactions for RNA: ENST00000464139.5

TUBGCP3-204, Transcript of tubulin gamma complex associated protein 3, humanhuman

TSL 1 (best) BASIC

Gene TUBGCP3, Length 2,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP3-204ENST00000464139 BCL11BQ9C0K0 894 aaPredicted RBP23.28■■□□□ 1.32
TUBGCP3-204ENST00000464139 MTMR7Q9Y216 660 aa23.28■■□□□ 1.32
TUBGCP3-204ENST00000464139 SERPINB2P05120 415 aa23.27■■□□□ 1.32
TUBGCP3-204ENST00000464139 KIF5BP33176 963 aa23.27■■□□□ 1.32
TUBGCP3-204ENST00000464139 FMR1Q06787 632 aaKnown RBP eCLIP23.27■■□□□ 1.32
TUBGCP3-204ENST00000464139 PTGDRQ13258 359 aa23.27■■□□□ 1.32
TUBGCP3-204ENST00000464139 CFAP100Q494V2 611 aa23.27■■□□□ 1.32
TUBGCP3-204ENST00000464139 NOL10Q9BSC4 688 aaKnown RBP23.27■■□□□ 1.32
TUBGCP3-204ENST00000464139 CD209Q9NNX6 404 aa23.27■■□□□ 1.32
TUBGCP3-204ENST00000464139 AFMP43652 599 aa23.27■■□□□ 1.32
TUBGCP3-204ENST00000464139 MORC3Q14149 939 aa23.27■■□□□ 1.32
TUBGCP3-204ENST00000464139 PDCL3Q9H2J4 239 aa23.27■■□□□ 1.32
TUBGCP3-204ENST00000464139 VWA3AA6NCI4 1184 aa23.26■■□□□ 1.31
TUBGCP3-204ENST00000464139 SFPQP23246 707 aaKnown RBP eCLIP23.26■■□□□ 1.31
TUBGCP3-204ENST00000464139 KANK3Q6NY19 840 aa23.26■■□□□ 1.31
TUBGCP3-204ENST00000464139 DGKHQ86XP1 1220 aa23.26■■□□□ 1.31
TUBGCP3-204ENST00000464139 CCDC150Q8NCX0 1101 aa23.26■■□□□ 1.31
TUBGCP3-204ENST00000464139 ZNF592Q92610 1267 aa23.26■■□□□ 1.31
TUBGCP3-204ENST00000464139 GPKOWQ92917 476 aaPredicted RBP eCLIP23.26■■□□□ 1.31
TUBGCP3-204ENST00000464139 ADRA2BP18089 450 aa23.26■■□□□ 1.31
TUBGCP3-204ENST00000464139 CASP1P29466 404 aa23.26■■□□□ 1.31
TUBGCP3-204ENST00000464139 PPP4CP60510 307 aa23.26■■□□□ 1.31
TUBGCP3-204ENST00000464139 TRMT44Q8IYL2 757 aaKnown RBP23.26■■□□□ 1.31
TUBGCP3-204ENST00000464139 CCAR2Q8N163 923 aaKnown RBP23.26■■□□□ 1.31
TUBGCP3-204ENST00000464139 FERMT2Q96AC1 680 aa23.26■■□□□ 1.31
TUBGCP3-204ENST00000464139 RTFDC1Q9BY42 306 aaPredicted RBP23.26■■□□□ 1.31
TUBGCP3-204ENST00000464139 TMEM232C9JQI7 657 aa23.25■■□□□ 1.31
TUBGCP3-204ENST00000464139 TSPY3P0CV98 308 aa23.25■■□□□ 1.31
TUBGCP3-204ENST00000464139 TSPY8P0CW00 308 aa23.25■■□□□ 1.31
TUBGCP3-204ENST00000464139 CRY2Q49AN0 593 aa23.25■■□□□ 1.31
TUBGCP3-204ENST00000464139 C15orf52Q6ZUT6 534 aaKnown RBP23.25■■□□□ 1.31
TUBGCP3-204ENST00000464139 MORC2Q9Y6X9 1032 aaPredicted RBP23.25■■□□□ 1.31
TUBGCP3-204ENST00000464139 LDHCP07864 332 aa23.25■■□□□ 1.31
TUBGCP3-204ENST00000464139 BTDP43251 543 aa23.25■■□□□ 1.31
TUBGCP3-204ENST00000464139 ST5P78524 1137 aa23.25■■□□□ 1.31
TUBGCP3-204ENST00000464139 CEP135Q66GS9 1140 aa23.25■■□□□ 1.31
TUBGCP3-204ENST00000464139 AMOTL1Q8IY63 956 aa23.25■■□□□ 1.31
TUBGCP3-204ENST00000464139 ZNF444Q8N0Y2 327 aaPredicted RBP23.25■■□□□ 1.31
TUBGCP3-204ENST00000464139 ZNF710Q8N1W2 664 aa23.25■■□□□ 1.31
TUBGCP3-204ENST00000464139 MLKLQ8NB16 471 aa23.25■■□□□ 1.31
TUBGCP3-204ENST00000464139 GGA1Q9UJY5 639 aa23.25■■□□□ 1.31
TUBGCP3-204ENST00000464139 CBFA2T2O43439 604 aa23.24■■□□□ 1.31
TUBGCP3-204ENST00000464139 ONECUT3O60422 494 aaPredicted RBP23.24■■□□□ 1.31
TUBGCP3-204ENST00000464139 BMP15O95972 392 aa23.24■■□□□ 1.31
TUBGCP3-204ENST00000464139 MCM7P33993 719 aa23.24■■□□□ 1.31
TUBGCP3-204ENST00000464139 ATP2C1P98194 919 aaPredicted RBP23.24■■□□□ 1.31
TUBGCP3-204ENST00000464139 PTPN14Q15678 1187 aa23.24■■□□□ 1.31
TUBGCP3-204ENST00000464139 SPATA20Q8TB22 786 aa23.24■■□□□ 1.31
TUBGCP3-204ENST00000464139 NFE2L3Q9Y4A8 694 aa23.24■■□□□ 1.31
TUBGCP3-204ENST00000464139 NYAP1Q6ZVC0 841 aa23.23■■□□□ 1.31
TUBGCP3-204ENST00000464139 PAGE5Q96GU1 130 aa23.23■■□□□ 1.31
TUBGCP3-204ENST00000464139 RBM17Q96I25 401 aaKnown RBP23.23■■□□□ 1.31
TUBGCP3-204ENST00000464139 MED15Q96RN5 788 aa23.23■■□□□ 1.31
TUBGCP3-204ENST00000464139 STX8Q9UNK0 236 aa23.23■■□□□ 1.31
TUBGCP3-204ENST00000464139 ROBO3Q96MS0 1386 aa23.23■■□□□ 1.31
TUBGCP3-204ENST00000464139 SLFN14P0C7P3 912 aa23.23■■□□□ 1.31
TUBGCP3-204ENST00000464139 ATP2B4P23634 1241 aa23.23■■□□□ 1.31
TUBGCP3-204ENST00000464139 ANKS1AQ92625 1134 aa23.23■■□□□ 1.31
TUBGCP3-204ENST00000464139 MAD2L2Q9UI95 211 aa23.23■■□□□ 1.31
TUBGCP3-204ENST00000464139 UBR3Q6ZT12 1888 aa23.23■■□□□ 1.31
TUBGCP3-204ENST00000464139 SLC35G1Q2M3R5 365 aa23.22■■□□□ 1.31
TUBGCP3-204ENST00000464139 E4F1Q66K89 784 aaPredicted RBP23.22■■□□□ 1.31
TUBGCP3-204ENST00000464139 TRIML1Q8N9V2 468 aa23.22■■□□□ 1.31
TUBGCP3-204ENST00000464139 RASGRP4Q8TDF6 673 aa23.22■■□□□ 1.31
TUBGCP3-204ENST00000464139 INTS13Q9NVM9 706 aa23.22■■□□□ 1.31
TUBGCP3-204ENST00000464139 POLLQ9UGP5 575 aa23.22■■□□□ 1.31
TUBGCP3-204ENST00000464139 NAV1Q8NEY1 1877 aa23.22■■□□□ 1.31
TUBGCP3-204ENST00000464139 RASA1P20936 1047 aa23.22■■□□□ 1.31
TUBGCP3-204ENST00000464139 GOLGA8FQ08AF8 430 aa23.22■■□□□ 1.31
TUBGCP3-204ENST00000464139 GOLGA8DPQ0D2H9 430 aa23.22■■□□□ 1.31
TUBGCP3-204ENST00000464139 GRM4Q14833 912 aa23.22■■□□□ 1.31
TUBGCP3-204ENST00000464139 TYW1BQ6NUM6 668 aa23.22■■□□□ 1.31
TUBGCP3-204ENST00000464139 VSTM4Q8IW00 320 aa23.22■■□□□ 1.31
TUBGCP3-204ENST00000464139 STAMQ92783 540 aa23.22■■□□□ 1.31
TUBGCP3-204ENST00000464139 DACH1Q9UI36 760 aa23.22■■□□□ 1.31
TUBGCP3-204ENST00000464139 FAM205AQ6ZU69 1335 aa23.21■■□□□ 1.31
TUBGCP3-204ENST00000464139 BLIDQ8IZY5 108 aa23.21■■□□□ 1.31
TUBGCP3-204ENST00000464139 IL1R1P14778 569 aa23.21■■□□□ 1.31
TUBGCP3-204ENST00000464139 DDR1Q08345 913 aa23.21■■□□□ 1.31
TUBGCP3-204ENST00000464139 IL17AQ16552 155 aa23.21■■□□□ 1.31
TUBGCP3-204ENST00000464139 RASGRP2Q7LDG7 609 aa23.21■■□□□ 1.31
TUBGCP3-204ENST00000464139 SH3RF1Q7Z6J0 888 aa23.21■■□□□ 1.31
TUBGCP3-204ENST00000464139 TEX11Q8IYF3 940 aa23.21■■□□□ 1.31
TUBGCP3-204ENST00000464139 ENOX1Q8TC92 643 aaKnown RBP23.21■■□□□ 1.31
TUBGCP3-204ENST00000464139 TMEM47Q9BQJ4 181 aa23.21■■□□□ 1.31
TUBGCP3-204ENST00000464139 PAXBP1Q9Y5B6 917 aa23.21■■□□□ 1.31
TUBGCP3-204ENST00000464139 IGSF3O75054 1194 aa23.2■■□□□ 1.3
TUBGCP3-204ENST00000464139 CDK11BP21127 795 aaKnown RBP23.2■■□□□ 1.3
TUBGCP3-204ENST00000464139 MFSD14BQ5SR56 506 aa23.2■■□□□ 1.3
TUBGCP3-204ENST00000464139 SAMSN1Q9NSI8 373 aaKnown RBP23.2■■□□□ 1.3
TUBGCP3-204ENST00000464139 TRPC5Q9UL62 973 aaPredicted RBP23.2■■□□□ 1.3
TUBGCP3-204ENST00000464139 CYTH3O43739 400 aa23.2■■□□□ 1.3
TUBGCP3-204ENST00000464139 MYO1BO43795 1136 aa23.2■■□□□ 1.3
TUBGCP3-204ENST00000464139 GOLGA8HP0CJ92 632 aa23.2■■□□□ 1.3
TUBGCP3-204ENST00000464139 TBC1D16Q8TBP0 767 aa23.2■■□□□ 1.3
TUBGCP3-204ENST00000464139 GPR75-ASB3A0A0A6YYF3 556 aa23.19■■□□□ 1.3
TUBGCP3-204ENST00000464139 TOP1P11387 765 aaKnown RBP23.19■■□□□ 1.3
TUBGCP3-204ENST00000464139 ZNF18P17022 549 aa23.19■■□□□ 1.3
TUBGCP3-204ENST00000464139 CALML3P27482 149 aa23.19■■□□□ 1.3
TUBGCP3-204ENST00000464139 TRAPPC10P48553 1259 aa23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms