RNA–Protein interactions for RNA: ENST00000464012.1

CCHCR1-210, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 2

Gene CCHCR1, Length 512 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-210ENST00000464012 GCC1Q96CN9 775 aa23.09■■□□□ 1.29
CCHCR1-210ENST00000464012 SEC62Q99442 399 aaKnown RBP23.09■■□□□ 1.29
CCHCR1-210ENST00000464012 EPB41L4AQ9HCS5 686 aaPredicted RBP23.09■■□□□ 1.29
CCHCR1-210ENST00000464012 BTBD7Q9P203 1132 aa23.09■■□□□ 1.29
CCHCR1-210ENST00000464012 SALL3Q9BXA9 1300 aa23.08■■□□□ 1.29
CCHCR1-210ENST00000464012 APPP05067 770 aa23.08■■□□□ 1.29
CCHCR1-210ENST00000464012 HDAC1Q13547 482 aaPredicted RBP23.08■■□□□ 1.29
CCHCR1-210ENST00000464012 SAMD1Q6SPF0 538 aaPredicted RBP23.08■■□□□ 1.29
CCHCR1-210ENST00000464012 PLEKHH3Q7Z736 793 aa23.08■■□□□ 1.29
CCHCR1-210ENST00000464012 TRIB2Q92519 343 aa23.08■■□□□ 1.29
CCHCR1-210ENST00000464012 DEFB118Q96PH6 123 aa23.08■■□□□ 1.29
CCHCR1-210ENST00000464012 SH2D4AQ9H788 454 aa23.08■■□□□ 1.29
CCHCR1-210ENST00000464012 SGPL1O95470 568 aa23.07■■□□□ 1.28
CCHCR1-210ENST00000464012 GNAT2P19087 354 aa23.07■■□□□ 1.28
CCHCR1-210ENST00000464012 CCNA1P78396 465 aa23.07■■□□□ 1.28
CCHCR1-210ENST00000464012 SBK1Q52WX2 424 aa23.07■■□□□ 1.28
CCHCR1-210ENST00000464012 GIMAP6Q6P9H5 292 aa23.07■■□□□ 1.28
CCHCR1-210ENST00000464012 SIAH1Q8IUQ4 282 aa23.07■■□□□ 1.28
CCHCR1-210ENST00000464012 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.07■■□□□ 1.28
CCHCR1-210ENST00000464012 TMX2Q9Y320 296 aa23.07■■□□□ 1.28
CCHCR1-210ENST00000464012 ROBO3Q96MS0 1386 aa23.06■■□□□ 1.28
CCHCR1-210ENST00000464012 RAD21O60216 631 aa23.06■■□□□ 1.28
CCHCR1-210ENST00000464012 EEF2P13639 858 aaKnown RBP23.06■■□□□ 1.28
CCHCR1-210ENST00000464012 LBX2Q6XYB7 198 aa23.06■■□□□ 1.28
CCHCR1-210ENST00000464012 VCPKMTQ9H867 229 aa23.06■■□□□ 1.28
CCHCR1-210ENST00000464012 MKNK2Q9HBH9 465 aa23.06■■□□□ 1.28
CCHCR1-210ENST00000464012 FARP2O94887 1054 aaPredicted RBP23.05■■□□□ 1.28
CCHCR1-210ENST00000464012 TFRCP02786 760 aaKnown RBP23.05■■□□□ 1.28
CCHCR1-210ENST00000464012 COG2Q14746 738 aa23.05■■□□□ 1.28
CCHCR1-210ENST00000464012 LPAR1Q92633 364 aa23.05■■□□□ 1.28
CCHCR1-210ENST00000464012 PAK6Q9NQU5 681 aaPredicted RBP23.05■■□□□ 1.28
CCHCR1-210ENST00000464012 FRMPD3Q5JV73 1810 aa23.04■■□□□ 1.28
CCHCR1-210ENST00000464012 FLOT1O75955 427 aa23.04■■□□□ 1.28
CCHCR1-210ENST00000464012 ZKSCAN1P17029 563 aaPredicted RBP23.04■■□□□ 1.28
CCHCR1-210ENST00000464012 RASA1P20936 1047 aa23.04■■□□□ 1.28
CCHCR1-210ENST00000464012 RGS2P41220 211 aa23.04■■□□□ 1.28
CCHCR1-210ENST00000464012 MORN1Q5T089 497 aa23.04■■□□□ 1.28
CCHCR1-210ENST00000464012 KANSL2Q9H9L4 492 aa23.04■■□□□ 1.28
CCHCR1-210ENST00000464012 PATL2C9JE40 543 aaKnown RBP23.03■■□□□ 1.28
CCHCR1-210ENST00000464012 PDE1AP54750 535 aa23.03■■□□□ 1.28
CCHCR1-210ENST00000464012 CCL14Q16627 93 aa23.03■■□□□ 1.28
CCHCR1-210ENST00000464012 ZMYM1Q5SVZ6 1142 aa23.03■■□□□ 1.28
CCHCR1-210ENST00000464012 CCDC129Q6ZRS4 1044 aa23.03■■□□□ 1.28
CCHCR1-210ENST00000464012 IFNL3Q8IZI9 196 aa23.03■■□□□ 1.28
CCHCR1-210ENST00000464012 EXOC6Q8TAG9 804 aa23.03■■□□□ 1.28
CCHCR1-210ENST00000464012 APBA2Q99767 749 aa23.03■■□□□ 1.28
CCHCR1-210ENST00000464012 LNPKQ9C0E8 428 aa23.03■■□□□ 1.28
CCHCR1-210ENST00000464012 HMX1Q9NP08 348 aaPredicted RBP23.03■■□□□ 1.28
CCHCR1-210ENST00000464012 ALPK3Q96L96 1907 aa23.02■■□□□ 1.28
CCHCR1-210ENST00000464012 WDR46O15213 610 aaKnown RBP23.02■■□□□ 1.28
CCHCR1-210ENST00000464012 PRDM1O75626 825 aa23.02■■□□□ 1.28
CCHCR1-210ENST00000464012 XRCC5P13010 732 aaKnown RBP23.02■■□□□ 1.28
CCHCR1-210ENST00000464012 PRKAR2AP13861 404 aaKnown RBP23.02■■□□□ 1.28
CCHCR1-210ENST00000464012 MAP2K5Q13163 448 aa23.02■■□□□ 1.28
CCHCR1-210ENST00000464012 B4GALNT3Q6L9W6 998 aa23.02■■□□□ 1.28
CCHCR1-210ENST00000464012 USP6NLQ92738 828 aa23.02■■□□□ 1.28
CCHCR1-210ENST00000464012 DPF3Q92784 378 aa23.02■■□□□ 1.28
CCHCR1-210ENST00000464012 ATG4CQ96DT6 458 aa23.02■■□□□ 1.28
CCHCR1-210ENST00000464012 NACAP1Q9BZK3 213 aa23.02■■□□□ 1.28
CCHCR1-210ENST00000464012 GOPCQ9HD26 462 aa23.02■■□□□ 1.28
CCHCR1-210ENST00000464012 HOXC10Q9NYD6 342 aa23.02■■□□□ 1.28
CCHCR1-210ENST00000464012 IVNS1ABPQ9Y6Y0 642 aa23.02■■□□□ 1.28
CCHCR1-210ENST00000464012 ZNF236Q9UL36 1845 aa23.02■■□□□ 1.28
CCHCR1-210ENST00000464012 RPTORQ8N122 1335 aa23.02■■□□□ 1.28
CCHCR1-210ENST00000464012 DSG3P32926 999 aa23.01■■□□□ 1.27
CCHCR1-210ENST00000464012 AAMPQ13685 434 aa23.01■■□□□ 1.27
CCHCR1-210ENST00000464012 PLS1Q14651 629 aa23.01■■□□□ 1.27
CCHCR1-210ENST00000464012 UBE2Q1Q7Z7E8 422 aa23.01■■□□□ 1.27
CCHCR1-210ENST00000464012 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.01■■□□□ 1.27
CCHCR1-210ENST00000464012 NAPBQ9H115 298 aa23.01■■□□□ 1.27
CCHCR1-210ENST00000464012 STAP2Q9UGK3 403 aa23.01■■□□□ 1.27
CCHCR1-210ENST00000464012 ZNFX1Q9P2E3 1918 aaKnown RBP23.01■■□□□ 1.27
CCHCR1-210ENST00000464012 PTPREP23469 700 aa23■■□□□ 1.27
CCHCR1-210ENST00000464012 TRMT44Q8IYL2 757 aaKnown RBP23■■□□□ 1.27
CCHCR1-210ENST00000464012 EVI5LQ96CN4 794 aa23■■□□□ 1.27
CCHCR1-210ENST00000464012 MOV10L1Q9BXT6 1211 aaKnown RBP23■■□□□ 1.27
CCHCR1-210ENST00000464012 SPATC1LQ9H0A9 340 aa23■■□□□ 1.27
CCHCR1-210ENST00000464012 RWDD1Q9H446 243 aaPredicted RBP23■■□□□ 1.27
CCHCR1-210ENST00000464012 SLC15A5A6NIM6 579 aa22.99■■□□□ 1.27
CCHCR1-210ENST00000464012 FAM83BQ5T0W9 1011 aa22.99■■□□□ 1.27
CCHCR1-210ENST00000464012 ZNF444Q8N0Y2 327 aaPredicted RBP22.99■■□□□ 1.27
CCHCR1-210ENST00000464012 HTATIP2Q9BUP3 242 aa22.99■■□□□ 1.27
CCHCR1-210ENST00000464012 CRISPLD2Q9H0B8 497 aa22.99■■□□□ 1.27
CCHCR1-210ENST00000464012 FBXO28Q9NVF7 368 aa22.99■■□□□ 1.27
CCHCR1-210ENST00000464012 CACNB2Q08289 660 aaPredicted RBP22.98■■□□□ 1.27
CCHCR1-210ENST00000464012 GRB14Q14449 540 aa22.98■■□□□ 1.27
CCHCR1-210ENST00000464012 MAP3K21Q5TCX8 1036 aa22.98■■□□□ 1.27
CCHCR1-210ENST00000464012 MB21D1Q8N884 522 aa22.98■■□□□ 1.27
CCHCR1-210ENST00000464012 DIS3LQ8TF46 1054 aaKnown RBP22.98■■□□□ 1.27
CCHCR1-210ENST00000464012 ZNF287Q9HBT7 754 aa22.98■■□□□ 1.27
CCHCR1-210ENST00000464012 PLXNA1Q9UIW2 1896 aa22.97■■□□□ 1.27
CCHCR1-210ENST00000464012 IGHDP01880 384 aa22.97■■□□□ 1.27
CCHCR1-210ENST00000464012 ERCC3P19447 782 aa22.97■■□□□ 1.27
CCHCR1-210ENST00000464012 PPARAQ07869 468 aa22.97■■□□□ 1.27
CCHCR1-210ENST00000464012 NCAPG2Q86XI2 1143 aa22.97■■□□□ 1.27
CCHCR1-210ENST00000464012 SMC5Q8IY18 1101 aa22.97■■□□□ 1.27
CCHCR1-210ENST00000464012 NUP88Q99567 741 aaPredicted RBP22.97■■□□□ 1.27
CCHCR1-210ENST00000464012 FLRT1Q9NZU1 646 aa22.97■■□□□ 1.27
CCHCR1-210ENST00000464012 TRIM6-TRIM34B2RNG4 842 aa22.96■■□□□ 1.27
CCHCR1-210ENST00000464012 H0YGN5 161 aa22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 166.9 ms