RNA–Protein interactions for RNA: ENST00000462715.1

TRAPPC3-205, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 2,428 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-205ENST00000462715 DDX11Q96FC9 970 aa13.08□□□□□ -0.32
TRAPPC3-205ENST00000462715 SNX14Q9Y5W7 946 aa13.08□□□□□ -0.32
TRAPPC3-205ENST00000462715 ZSCAN12O43309 604 aa13.08□□□□□ -0.32
TRAPPC3-205ENST00000462715 KIF4BQ2VIQ3 1234 aa13.08□□□□□ -0.32
TRAPPC3-205ENST00000462715 NOL8Q76FK4 1167 aaKnown RBP13.08□□□□□ -0.32
TRAPPC3-205ENST00000462715 CKAP2LQ8IYA6 745 aa13.08□□□□□ -0.32
TRAPPC3-205ENST00000462715 KCNB2Q92953 911 aa13.08□□□□□ -0.32
TRAPPC3-205ENST00000462715 TMCO5BA8MYB1 307 aa13.07□□□□□ -0.32
TRAPPC3-205ENST00000462715 ERLIN1O75477 346 aa13.07□□□□□ -0.32
TRAPPC3-205ENST00000462715 SEC31AO94979 1220 aaKnown RBP13.07□□□□□ -0.32
TRAPPC3-205ENST00000462715 SFPQP23246 707 aaKnown RBP eCLIP13.07□□□□□ -0.32
TRAPPC3-205ENST00000462715 MAP3K9P80192 1104 aa13.07□□□□□ -0.32
TRAPPC3-205ENST00000462715 SART3Q15020 963 aaKnown RBP13.07□□□□□ -0.32
TRAPPC3-205ENST00000462715 CAMK4Q16566 473 aa13.07□□□□□ -0.32
TRAPPC3-205ENST00000462715 LONRF2Q1L5Z9 754 aa13.07□□□□□ -0.32
TRAPPC3-205ENST00000462715 TBC1D10BQ4KMP7 808 aaPredicted RBP13.07□□□□□ -0.32
TRAPPC3-205ENST00000462715 TSHZ3Q63HK5 1081 aa13.07□□□□□ -0.32
TRAPPC3-205ENST00000462715 GOLGA1Q92805 767 aa13.07□□□□□ -0.32
TRAPPC3-205ENST00000462715 TEKT1Q969V4 418 aa13.07□□□□□ -0.32
TRAPPC3-205ENST00000462715 SPATA32Q96LK8 384 aa13.07□□□□□ -0.32
TRAPPC3-205ENST00000462715 MRIQ9BWK5 157 aa13.07□□□□□ -0.32
TRAPPC3-205ENST00000462715 PAG1Q9NWQ8 432 aa13.07□□□□□ -0.32
TRAPPC3-205ENST00000462715 SHTN1A0MZ66 631 aa13.07□□□□□ -0.32
TRAPPC3-205ENST00000462715 GOLIM4O00461 696 aa13.07□□□□□ -0.32
TRAPPC3-205ENST00000462715 TXLNAP40222 546 aa13.07□□□□□ -0.32
TRAPPC3-205ENST00000462715 RBM5P52756 815 aaKnown RBP eCLIP13.07□□□□□ -0.32
TRAPPC3-205ENST00000462715 GSTO1P78417 241 aa13.07□□□□□ -0.32
TRAPPC3-205ENST00000462715 DLGAP5Q15398 846 aa13.07□□□□□ -0.32
TRAPPC3-205ENST00000462715 GRIK5Q16478 980 aa13.07□□□□□ -0.32
TRAPPC3-205ENST00000462715 EAPPQ56P03 285 aaPredicted RBP13.07□□□□□ -0.32
TRAPPC3-205ENST00000462715 TRIM65Q6PJ69 517 aa13.07□□□□□ -0.32
TRAPPC3-205ENST00000462715 TMED8Q6PL24 325 aaPredicted RBP13.07□□□□□ -0.32
TRAPPC3-205ENST00000462715 SAMD7Q7Z3H4 446 aa13.07□□□□□ -0.32
TRAPPC3-205ENST00000462715 MTMR14Q8NCE2 650 aa13.07□□□□□ -0.32
TRAPPC3-205ENST00000462715 PI4K2BQ8TCG2 481 aa13.07□□□□□ -0.32
TRAPPC3-205ENST00000462715 GBP3Q9H0R5 595 aa13.07□□□□□ -0.32
TRAPPC3-205ENST00000462715 ATXN2Q99700 1313 aaKnown RBP13.06□□□□□ -0.32
TRAPPC3-205ENST00000462715 SETQ01105 290 aaPredicted RBP13.06□□□□□ -0.32
TRAPPC3-205ENST00000462715 MAP3K12Q12852 859 aa13.06□□□□□ -0.32
TRAPPC3-205ENST00000462715 ARID5BQ14865 1188 aa13.06□□□□□ -0.32
TRAPPC3-205ENST00000462715 RBM26Q5T8P6 1007 aaKnown RBP13.06□□□□□ -0.32
TRAPPC3-205ENST00000462715 POTEDQ86YR6 584 aa13.06□□□□□ -0.32
TRAPPC3-205ENST00000462715 LRRN4CLQ8ND94 238 aa13.06□□□□□ -0.32
TRAPPC3-205ENST00000462715 LEO1Q8WVC0 666 aaPredicted RBP13.06□□□□□ -0.32
TRAPPC3-205ENST00000462715 ALDH8A1Q9H2A2 487 aaPredicted RBP13.06□□□□□ -0.32
TRAPPC3-205ENST00000462715 RAB21Q9UL25 225 aa13.06□□□□□ -0.32
TRAPPC3-205ENST00000462715 NDUFB9Q9Y6M9 179 aa13.06□□□□□ -0.32
TRAPPC3-205ENST00000462715 IDH1O75874 414 aaKnown RBP13.05□□□□□ -0.32
TRAPPC3-205ENST00000462715 CRKP46108 304 aa13.05□□□□□ -0.32
TRAPPC3-205ENST00000462715 MAP2K1Q02750 393 aaPredicted RBP13.05□□□□□ -0.32
TRAPPC3-205ENST00000462715 C11orf91Q3C1V1 193 aa13.05□□□□□ -0.32
TRAPPC3-205ENST00000462715 CFAP100Q494V2 611 aa13.05□□□□□ -0.32
TRAPPC3-205ENST00000462715 HHIPL2Q6UWX4 724 aa13.05□□□□□ -0.32
TRAPPC3-205ENST00000462715 HOMER1Q86YM7 354 aa13.05□□□□□ -0.32
TRAPPC3-205ENST00000462715 CEP57L1Q8IYX8 460 aa13.05□□□□□ -0.32
TRAPPC3-205ENST00000462715 TRPM4Q8TD43 1214 aa13.05□□□□□ -0.32
TRAPPC3-205ENST00000462715 CARD6Q9BX69 1037 aa13.05□□□□□ -0.32
TRAPPC3-205ENST00000462715 PIH1D3Q9NQM4 214 aaKnown RBP13.05□□□□□ -0.32
TRAPPC3-205ENST00000462715 MAST2Q6P0Q8 1798 aa13.05□□□□□ -0.32
TRAPPC3-205ENST00000462715 PATL2C9JE40 543 aaKnown RBP13.05□□□□□ -0.32
TRAPPC3-205ENST00000462715 H3BQF6 201 aa13.05□□□□□ -0.32
TRAPPC3-205ENST00000462715 MYO1BO43795 1136 aa13.05□□□□□ -0.32
TRAPPC3-205ENST00000462715 LDHCP07864 332 aa13.05□□□□□ -0.32
TRAPPC3-205ENST00000462715 MECOMQ03112 1051 aa13.05□□□□□ -0.32
TRAPPC3-205ENST00000462715 LRCH2Q5VUJ6 765 aa13.05□□□□□ -0.32
TRAPPC3-205ENST00000462715 LDHDQ86WU2 507 aa13.05□□□□□ -0.32
TRAPPC3-205ENST00000462715 DHX40Q8IX18 779 aaKnown RBP13.05□□□□□ -0.32
TRAPPC3-205ENST00000462715 ZC3H15Q8WU90 426 aaKnown RBP13.05□□□□□ -0.32
TRAPPC3-205ENST00000462715 PARD6BQ9BYG5 372 aa13.05□□□□□ -0.32
TRAPPC3-205ENST00000462715 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.05□□□□□ -0.32
TRAPPC3-205ENST00000462715 LARP1BQ659C4 914 aaKnown RBP13.04□□□□□ -0.32
TRAPPC3-205ENST00000462715 ATL3Q6DD88 541 aa13.04□□□□□ -0.32
TRAPPC3-205ENST00000462715 LRRC31Q6UY01 552 aa13.04□□□□□ -0.32
TRAPPC3-205ENST00000462715 NSUN4Q96CB9 384 aaKnown RBP13.04□□□□□ -0.32
TRAPPC3-205ENST00000462715 ZDHHC15Q96MV8 337 aa13.04□□□□□ -0.32
TRAPPC3-205ENST00000462715 CLEC11AQ9Y240 323 aa13.04□□□□□ -0.32
TRAPPC3-205ENST00000462715 SPDYE2BA6NHP3 402 aa13.04□□□□□ -0.32
TRAPPC3-205ENST00000462715 SPDYE6P0CI01 402 aa13.04□□□□□ -0.32
TRAPPC3-205ENST00000462715 NAA16Q6N069 864 aaPredicted RBP13.04□□□□□ -0.32
TRAPPC3-205ENST00000462715 WNT10BO00744 389 aa13.03□□□□□ -0.32
TRAPPC3-205ENST00000462715 URI1O94763 535 aaPredicted RBP13.03□□□□□ -0.32
TRAPPC3-205ENST00000462715 ERLIN2O94905 339 aa13.03□□□□□ -0.32
TRAPPC3-205ENST00000462715 EGFRP00533 1210 aa13.03□□□□□ -0.32
TRAPPC3-205ENST00000462715 DIXDC1Q155Q3 683 aa13.03□□□□□ -0.32
TRAPPC3-205ENST00000462715 JMYQ8N9B5 988 aa13.03□□□□□ -0.32
TRAPPC3-205ENST00000462715 ZSWIM6Q9HCJ5 1215 aa13.03□□□□□ -0.32
TRAPPC3-205ENST00000462715 VPS18Q9P253 973 aa13.03□□□□□ -0.32
TRAPPC3-205ENST00000462715 CFAP45Q9UL16 551 aa13.03□□□□□ -0.32
TRAPPC3-205ENST00000462715 MRFAP1Q9Y605 127 aa13.03□□□□□ -0.32
TRAPPC3-205ENST00000462715 DOCK2Q92608 1830 aa13.03□□□□□ -0.32
TRAPPC3-205ENST00000462715 VPS37CA5D8V6 355 aaPredicted RBP13.03□□□□□ -0.32
TRAPPC3-205ENST00000462715 HIRAP54198 1017 aaPredicted RBP13.03□□□□□ -0.32
TRAPPC3-205ENST00000462715 MSANTD4Q8NCY6 345 aa13.03□□□□□ -0.32
TRAPPC3-205ENST00000462715 ERCC4Q92889 916 aaPredicted RBP13.03□□□□□ -0.32
TRAPPC3-205ENST00000462715 EDC3Q96F86 508 aaKnown RBP13.03□□□□□ -0.32
TRAPPC3-205ENST00000462715 FAM163AQ96GL9 167 aaPredicted RBP13.03□□□□□ -0.32
TRAPPC3-205ENST00000462715 CCDC34Q96HJ3 373 aa13.03□□□□□ -0.32
TRAPPC3-205ENST00000462715 ZBED3Q96IU2 234 aaPredicted RBP13.03□□□□□ -0.32
TRAPPC3-205ENST00000462715 LSG1Q9H089 658 aaKnown RBP13.03□□□□□ -0.32
TRAPPC3-205ENST00000462715 VIPAS39Q9H9C1 493 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms