RNA–Protein interactions for RNA: ENST00000457642.1

HMGN1P18-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 18, humanhuman

BASIC

Gene HMGN1P18, Length 277 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P18-201ENST00000457642 PIGBQ92521 554 aa3.76□□□□□ -1.81
HMGN1P18-201ENST00000457642 SYMPKQ92797 1274 aaKnown RBP3.76□□□□□ -1.81
HMGN1P18-201ENST00000457642 DDX17Q92841 729 aaKnown RBP3.76□□□□□ -1.81
HMGN1P18-201ENST00000457642 KIFC2Q96AC6 838 aa3.76□□□□□ -1.81
HMGN1P18-201ENST00000457642 WDR24Q96S15 920 aa3.76□□□□□ -1.81
HMGN1P18-201ENST00000457642 DESI2Q9BSY9 194 aa3.76□□□□□ -1.81
HMGN1P18-201ENST00000457642 PHF20Q9BVI0 1012 aa3.76□□□□□ -1.81
HMGN1P18-201ENST00000457642 NUP58Q9BVL2 599 aa3.76□□□□□ -1.81
HMGN1P18-201ENST00000457642 CDCA7Q9BWT1 371 aaPredicted RBP3.76□□□□□ -1.81
HMGN1P18-201ENST00000457642 BRIP1Q9BX63 1249 aa3.76□□□□□ -1.81
HMGN1P18-201ENST00000457642 PARD6BQ9BYG5 372 aa3.76□□□□□ -1.81
HMGN1P18-201ENST00000457642 CRNKL1Q9BZJ0 848 aaKnown RBP3.76□□□□□ -1.81
HMGN1P18-201ENST00000457642 TSGA10Q9BZW7 698 aa3.76□□□□□ -1.81
HMGN1P18-201ENST00000457642 FAM107BQ9H098 131 aa3.76□□□□□ -1.81
HMGN1P18-201ENST00000457642 HSD3B7Q9H2F3 369 aa3.76□□□□□ -1.81
HMGN1P18-201ENST00000457642 CUEDC2Q9H467 287 aa3.76□□□□□ -1.81
HMGN1P18-201ENST00000457642 MED4Q9NPJ6 270 aa3.76□□□□□ -1.81
HMGN1P18-201ENST00000457642 FAM217BQ9NTX9 383 aaPredicted RBP3.76□□□□□ -1.81
HMGN1P18-201ENST00000457642 PSD3Q9NYI0 1048 aa3.76□□□□□ -1.81
HMGN1P18-201ENST00000457642 ARPP21Q9UBL0 812 aaPredicted RBP3.76□□□□□ -1.81
HMGN1P18-201ENST00000457642 LIMA1Q9UHB6 759 aaKnown RBP3.76□□□□□ -1.81
HMGN1P18-201ENST00000457642 DENND2AQ9ULE3 1009 aa3.76□□□□□ -1.81
HMGN1P18-201ENST00000457642 PCDHB6Q9Y5E3 794 aa3.76□□□□□ -1.81
HMGN1P18-201ENST00000457642 ADGRG1Q9Y653 693 aa3.76□□□□□ -1.81
HMGN1P18-201ENST00000457642 NUP98P52948 1817 aa3.76□□□□□ -1.81
HMGN1P18-201ENST00000457642 BCORQ6W2J9 1755 aa3.76□□□□□ -1.81
HMGN1P18-201ENST00000457642 DUOX1Q9NRD9 1551 aa3.76□□□□□ -1.81
HMGN1P18-201ENST00000457642 MYH2Q9UKX2 1941 aa3.76□□□□□ -1.81
HMGN1P18-201ENST00000457642 MYO5AQ9Y4I1 1855 aaKnown RBP3.75□□□□□ -1.81
HMGN1P18-201ENST00000457642 SOS2Q07890 1332 aaPredicted RBP3.75□□□□□ -1.81
HMGN1P18-201ENST00000457642 RREB1Q92766 1687 aa3.75□□□□□ -1.81
HMGN1P18-201ENST00000457642 ITGB4P16144 1822 aa3.75□□□□□ -1.81
HMGN1P18-201ENST00000457642 CCDC194A0A1B0GVG4 234 aa3.75□□□□□ -1.81
HMGN1P18-201ENST00000457642 A0A1W2PQC6 194 aa3.75□□□□□ -1.81
HMGN1P18-201ENST00000457642 SOWAHDA6NJG2 315 aa3.75□□□□□ -1.81
HMGN1P18-201ENST00000457642 EXOC5O00471 708 aa3.75□□□□□ -1.81
HMGN1P18-201ENST00000457642 LAD1O00515 517 aa3.75□□□□□ -1.81
HMGN1P18-201ENST00000457642 FOXN1O15353 648 aa3.75□□□□□ -1.81
HMGN1P18-201ENST00000457642 KRT86O43790 486 aa3.75□□□□□ -1.81
HMGN1P18-201ENST00000457642 ORC4O43929 436 aa3.75□□□□□ -1.81
HMGN1P18-201ENST00000457642 USO1O60763 962 aaKnown RBP3.75□□□□□ -1.81
HMGN1P18-201ENST00000457642 FGFR1OPO95684 399 aaKnown RBP3.75□□□□□ -1.81
HMGN1P18-201ENST00000457642 TBC1D8O95759 1140 aa3.75□□□□□ -1.81
HMGN1P18-201ENST00000457642 RPN1P04843 607 aaKnown RBP3.75□□□□□ -1.81
HMGN1P18-201ENST00000457642 SCG2P13521 617 aa3.75□□□□□ -1.81
HMGN1P18-201ENST00000457642 FECHP22830 423 aa3.75□□□□□ -1.81
HMGN1P18-201ENST00000457642 CASP14P31944 242 aa3.75□□□□□ -1.81
HMGN1P18-201ENST00000457642 GUCY1A2P33402 732 aa3.75□□□□□ -1.81
HMGN1P18-201ENST00000457642 CCT6AP40227 531 aaKnown RBP3.75□□□□□ -1.81
HMGN1P18-201ENST00000457642 TNNT3P45378 269 aaPredicted RBP3.75□□□□□ -1.81
HMGN1P18-201ENST00000457642 USP5P45974 858 aa3.75□□□□□ -1.81
HMGN1P18-201ENST00000457642 LMAN1P49257 510 aa3.75□□□□□ -1.81
HMGN1P18-201ENST00000457642 TOB1P50616 345 aaPredicted RBP3.75□□□□□ -1.81
HMGN1P18-201ENST00000457642 COPB1P53618 953 aaKnown RBP3.75□□□□□ -1.81
HMGN1P18-201ENST00000457642 EIF5P55010 431 aaKnown RBP3.75□□□□□ -1.81
HMGN1P18-201ENST00000457642 STX17P56962 302 aa3.75□□□□□ -1.81
HMGN1P18-201ENST00000457642 ATP2C1P98194 919 aaPredicted RBP3.75□□□□□ -1.81
HMGN1P18-201ENST00000457642 AMPD3Q01432 767 aa3.75□□□□□ -1.81
HMGN1P18-201ENST00000457642 UBXN1Q04323 297 aa3.75□□□□□ -1.81
HMGN1P18-201ENST00000457642 DPYDQ12882 1025 aa3.75□□□□□ -1.81
HMGN1P18-201ENST00000457642 NR5A1Q13285 461 aa3.75□□□□□ -1.81
HMGN1P18-201ENST00000457642 CUL4BQ13620 913 aa3.75□□□□□ -1.81
HMGN1P18-201ENST00000457642 UBE4AQ14139 1066 aa3.75□□□□□ -1.81
HMGN1P18-201ENST00000457642 KRT31Q15323 416 aa3.75□□□□□ -1.81
HMGN1P18-201ENST00000457642 ZNF174Q15697 407 aa3.75□□□□□ -1.81
HMGN1P18-201ENST00000457642 HLFQ16534 295 aa3.75□□□□□ -1.81
HMGN1P18-201ENST00000457642 FKBP15Q5T1M5 1219 aa3.75□□□□□ -1.81
HMGN1P18-201ENST00000457642 ZNF658Q5TYW1 1059 aaPredicted RBP3.75□□□□□ -1.81
HMGN1P18-201ENST00000457642 SPTY2D1Q68D10 685 aaPredicted RBP3.75□□□□□ -1.81
HMGN1P18-201ENST00000457642 GALNT17Q6IS24 598 aa3.75□□□□□ -1.81
HMGN1P18-201ENST00000457642 TMTC3Q6ZXV5 915 aa3.75□□□□□ -1.81
HMGN1P18-201ENST00000457642 SH3RF1Q7Z6J0 888 aa3.75□□□□□ -1.81
HMGN1P18-201ENST00000457642 ANKRD18AQ8IVF6 992 aa3.75□□□□□ -1.81
HMGN1P18-201ENST00000457642 GRAMD1CQ8IYS0 662 aa3.75□□□□□ -1.81
HMGN1P18-201ENST00000457642 ZNF34Q8IZ26 560 aa3.75□□□□□ -1.81
HMGN1P18-201ENST00000457642 CCDC82Q8N4S0 544 aa3.75□□□□□ -1.81
HMGN1P18-201ENST00000457642 MIGA1Q8NAN2 632 aa3.75□□□□□ -1.81
HMGN1P18-201ENST00000457642 RETREG2Q8NC44 543 aa3.75□□□□□ -1.81
HMGN1P18-201ENST00000457642 MSANTD4Q8NCY6 345 aa3.75□□□□□ -1.81
HMGN1P18-201ENST00000457642 HELBQ8NG08 1087 aaPredicted RBP3.75□□□□□ -1.81
HMGN1P18-201ENST00000457642 OR8K1Q8NGG5 319 aa3.75□□□□□ -1.81
HMGN1P18-201ENST00000457642 NELFBQ8WX92 580 aa3.75□□□□□ -1.81
HMGN1P18-201ENST00000457642 RUBCNQ92622 972 aa3.75□□□□□ -1.81
HMGN1P18-201ENST00000457642 CCDC102AQ96A19 550 aa3.75□□□□□ -1.81
HMGN1P18-201ENST00000457642 SYTL4Q96C24 671 aaPredicted RBP3.75□□□□□ -1.81
HMGN1P18-201ENST00000457642 TRIM47Q96LD4 638 aa3.75□□□□□ -1.81
HMGN1P18-201ENST00000457642 PCMTD1Q96MG8 357 aaPredicted RBP3.75□□□□□ -1.81
HMGN1P18-201ENST00000457642 ALS2CR12Q96Q35 445 aa3.75□□□□□ -1.81
HMGN1P18-201ENST00000457642 RUFY1Q96T51 708 aa3.75□□□□□ -1.81
HMGN1P18-201ENST00000457642 LZTS2Q9BRK4 669 aa3.75□□□□□ -1.81
HMGN1P18-201ENST00000457642 ZKSCAN3Q9BRR0 538 aa3.75□□□□□ -1.81
HMGN1P18-201ENST00000457642 CRACR2AQ9BSW2 395 aa3.75□□□□□ -1.81
HMGN1P18-201ENST00000457642 LRRC27Q9C0I9 530 aa3.75□□□□□ -1.81
HMGN1P18-201ENST00000457642 THAP9Q9H5L6 903 aa3.75□□□□□ -1.81
HMGN1P18-201ENST00000457642 HAUS4Q9H6D7 363 aa3.75□□□□□ -1.81
HMGN1P18-201ENST00000457642 KAT14Q9H8E8 782 aa3.75□□□□□ -1.81
HMGN1P18-201ENST00000457642 MRPL44Q9H9J2 332 aaKnown RBP3.75□□□□□ -1.81
HMGN1P18-201ENST00000457642 ZNF287Q9HBT7 754 aa3.75□□□□□ -1.81
HMGN1P18-201ENST00000457642 SENP2Q9HC62 589 aa3.75□□□□□ -1.81
HMGN1P18-201ENST00000457642 LUC7LQ9NQ29 371 aaKnown RBP3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms