RNA–Protein interactions for RNA: ENST00000456367.5

PCDH9-203, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 5,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-203ENST00000456367 PBKQ96KB5 322 aa5.52□□□□□ -1.53
PCDH9-203ENST00000456367 NUF2Q9BZD4 464 aa5.52□□□□□ -1.53
PCDH9-203ENST00000456367 IRAK4Q9NWZ3 460 aa5.52□□□□□ -1.53
PCDH9-203ENST00000456367 AMFRQ9UKV5 643 aa5.52□□□□□ -1.53
PCDH9-203ENST00000456367 STXBP3O00186 592 aa5.52□□□□□ -1.53
PCDH9-203ENST00000456367 EIF3HO15372 352 aaKnown RBP eCLIP5.52□□□□□ -1.53
PCDH9-203ENST00000456367 JAK2O60674 1132 aa5.52□□□□□ -1.53
PCDH9-203ENST00000456367 HNRNPH1P31943 449 aaKnown RBP5.52□□□□□ -1.53
PCDH9-203ENST00000456367 PDE6CP51160 858 aa5.52□□□□□ -1.53
PCDH9-203ENST00000456367 USP14P54578 494 aa5.52□□□□□ -1.53
PCDH9-203ENST00000456367 COG7P83436 770 aa5.52□□□□□ -1.53
PCDH9-203ENST00000456367 GUCY2DQ02846 1103 aa5.52□□□□□ -1.53
PCDH9-203ENST00000456367 PNOCQ13519 176 aa5.52□□□□□ -1.53
PCDH9-203ENST00000456367 RAPGEF1Q13905 1077 aa5.52□□□□□ -1.53
PCDH9-203ENST00000456367 NBPF20Q3BBV1 942 aa5.52□□□□□ -1.53
PCDH9-203ENST00000456367 IFIT1BQ5T764 474 aaKnown RBP5.52□□□□□ -1.53
PCDH9-203ENST00000456367 ARHGEF18Q6ZSZ5 1173 aa5.52□□□□□ -1.53
PCDH9-203ENST00000456367 FAM43BQ6ZT52 329 aaPredicted RBP5.52□□□□□ -1.53
PCDH9-203ENST00000456367 DIS3L2Q8IYB7 885 aaKnown RBP5.52□□□□□ -1.53
PCDH9-203ENST00000456367 ZNF444Q8N0Y2 327 aaPredicted RBP5.52□□□□□ -1.53
PCDH9-203ENST00000456367 BICD1Q96G01 975 aa5.52□□□□□ -1.53
PCDH9-203ENST00000456367 MKNK2Q9HBH9 465 aa5.52□□□□□ -1.53
PCDH9-203ENST00000456367 BZW2Q9Y6E2 419 aaKnown RBP5.52□□□□□ -1.53
PCDH9-203ENST00000456367 GTPBP6O43824 516 aaPredicted RBP5.52□□□□□ -1.53
PCDH9-203ENST00000456367 CTNND1O60716 968 aaKnown RBP5.52□□□□□ -1.53
PCDH9-203ENST00000456367 RNF8O76064 485 aa5.52□□□□□ -1.53
PCDH9-203ENST00000456367 MYL1P05976 194 aa5.52□□□□□ -1.53
PCDH9-203ENST00000456367 MAN1A1P33908 653 aa5.52□□□□□ -1.53
PCDH9-203ENST00000456367 RFC1P35251 1148 aaPredicted RBP5.52□□□□□ -1.53
PCDH9-203ENST00000456367 COPB1P53618 953 aaKnown RBP5.52□□□□□ -1.53
PCDH9-203ENST00000456367 DPCR1Q3MIW9 517 aa5.52□□□□□ -1.53
PCDH9-203ENST00000456367 C10orf76Q5T2E6 689 aa5.52□□□□□ -1.53
PCDH9-203ENST00000456367 SWT1Q5T5J6 900 aaKnown RBP5.52□□□□□ -1.53
PCDH9-203ENST00000456367 KBTBD3Q8NAB2 608 aa5.52□□□□□ -1.53
PCDH9-203ENST00000456367 GRK7Q8WTQ7 553 aa5.52□□□□□ -1.53
PCDH9-203ENST00000456367 UBA5Q9GZZ9 404 aa5.52□□□□□ -1.53
PCDH9-203ENST00000456367 CCDC68Q9H2F9 335 aa5.52□□□□□ -1.53
PCDH9-203ENST00000456367 C6orf50Q9HD87 102 aa5.52□□□□□ -1.53
PCDH9-203ENST00000456367 FGFR1OP2Q9NVK5 253 aa5.52□□□□□ -1.53
PCDH9-203ENST00000456367 PTCH1Q13635 1447 aa5.52□□□□□ -1.53
PCDH9-203ENST00000456367 SAMD9Q5K651 1589 aa5.52□□□□□ -1.53
PCDH9-203ENST00000456367 HNRNPCL1O60812 293 aaKnown RBP5.52□□□□□ -1.53
PCDH9-203ENST00000456367 HEXIM1O94992 359 aaKnown RBP5.52□□□□□ -1.53
PCDH9-203ENST00000456367 CHGBP05060 677 aa5.52□□□□□ -1.53
PCDH9-203ENST00000456367 GNA11P29992 359 aa5.52□□□□□ -1.53
PCDH9-203ENST00000456367 KLHL30Q0D2K2 578 aa5.52□□□□□ -1.53
PCDH9-203ENST00000456367 RESTQ13127 1097 aa5.52□□□□□ -1.53
PCDH9-203ENST00000456367 SEMA3FQ13275 785 aa5.52□□□□□ -1.53
PCDH9-203ENST00000456367 C6orf118Q5T5N4 469 aa5.52□□□□□ -1.53
PCDH9-203ENST00000456367 SPTY2D1Q68D10 685 aaPredicted RBP5.52□□□□□ -1.53
PCDH9-203ENST00000456367 NLRP14Q86W24 1093 aa5.52□□□□□ -1.53
PCDH9-203ENST00000456367 CCDC144CPQ8IYA2 1237 aa5.52□□□□□ -1.53
PCDH9-203ENST00000456367 ANKRD35Q8N283 1001 aa5.52□□□□□ -1.53
PCDH9-203ENST00000456367 PIP4K2CQ8TBX8 421 aa5.52□□□□□ -1.53
PCDH9-203ENST00000456367 ALDH8A1Q9H2A2 487 aaPredicted RBP5.52□□□□□ -1.53
PCDH9-203ENST00000456367 SYNCQ9H7C4 482 aa5.52□□□□□ -1.53
PCDH9-203ENST00000456367 ZCCHC17Q9NP64 241 aaKnown RBP5.52□□□□□ -1.53
PCDH9-203ENST00000456367 ZDHHC9Q9Y397 364 aa5.52□□□□□ -1.53
PCDH9-203ENST00000456367 RAPGEF6Q8TEU7 1601 aa5.52□□□□□ -1.53
PCDH9-203ENST00000456367 CCDC188H7C350 402 aa5.51□□□□□ -1.53
PCDH9-203ENST00000456367 KRIT1O00522 736 aa5.51□□□□□ -1.53
PCDH9-203ENST00000456367 ATP5JP18859 108 aa5.51□□□□□ -1.53
PCDH9-203ENST00000456367 MRPS35P82673 323 aaKnown RBP5.51□□□□□ -1.53
PCDH9-203ENST00000456367 PDE4DQ08499 809 aa5.51□□□□□ -1.53
PCDH9-203ENST00000456367 CAVIN4Q5BKX8 364 aa5.51□□□□□ -1.53
PCDH9-203ENST00000456367 LZICQ8WZA0 190 aa5.51□□□□□ -1.53
PCDH9-203ENST00000456367 HVCN1Q96D96 273 aa5.51□□□□□ -1.53
PCDH9-203ENST00000456367 EPN3Q9H201 632 aa5.51□□□□□ -1.53
PCDH9-203ENST00000456367 SERTAD1Q9UHV2 236 aa5.51□□□□□ -1.53
PCDH9-203ENST00000456367 UHRF1BP1LA0JNW5 1464 aa5.51□□□□□ -1.53
PCDH9-203ENST00000456367 CASP14P31944 242 aa5.51□□□□□ -1.53
PCDH9-203ENST00000456367 EVA1CP58658 441 aa5.51□□□□□ -1.53
PCDH9-203ENST00000456367 ADCY2Q08462 1091 aa5.51□□□□□ -1.53
PCDH9-203ENST00000456367 CFAP157Q5JU67 520 aa5.51□□□□□ -1.53
PCDH9-203ENST00000456367 PPP4R3AQ6IN85 833 aa5.51□□□□□ -1.53
PCDH9-203ENST00000456367 TXNDC2Q86VQ3 553 aa5.51□□□□□ -1.53
PCDH9-203ENST00000456367 TRIM42Q8IWZ5 723 aa5.51□□□□□ -1.53
PCDH9-203ENST00000456367 CABP5Q9NP86 173 aa5.51□□□□□ -1.53
PCDH9-203ENST00000456367 PAIP2BQ9ULR5 123 aaKnown RBP5.51□□□□□ -1.53
PCDH9-203ENST00000456367 PTPRTO14522 1441 aa5.51□□□□□ -1.53
PCDH9-203ENST00000456367 TXNDC9O14530 226 aa5.51□□□□□ -1.53
PCDH9-203ENST00000456367 DCTN3O75935 186 aa5.51□□□□□ -1.53
PCDH9-203ENST00000456367 ZFXP17010 805 aaPredicted RBP5.51□□□□□ -1.53
PCDH9-203ENST00000456367 TNFAIP3P21580 790 aa5.51□□□□□ -1.53
PCDH9-203ENST00000456367 KCTD16Q68DU8 428 aa5.51□□□□□ -1.53
PCDH9-203ENST00000456367 HS2ST1Q7LGA3 356 aa5.51□□□□□ -1.53
PCDH9-203ENST00000456367 SDCCAG8Q86SQ7 713 aaPredicted RBP5.51□□□□□ -1.53
PCDH9-203ENST00000456367 ANKLE2Q86XL3 938 aa5.51□□□□□ -1.53
PCDH9-203ENST00000456367 MSL3Q8N5Y2 521 aaKnown RBP5.51□□□□□ -1.53
PCDH9-203ENST00000456367 LINC00301Q8NCQ3 95 aa5.51□□□□□ -1.53
PCDH9-203ENST00000456367 YIPF3Q9GZM5 350 aa5.51□□□□□ -1.53
PCDH9-203ENST00000456367 CUEDC2Q9H467 287 aa5.51□□□□□ -1.53
PCDH9-203ENST00000456367 PCDHA5Q9Y5H7 936 aa5.51□□□□□ -1.53
PCDH9-203ENST00000456367 ZNF518AQ6AHZ1 1483 aa5.51□□□□□ -1.53
PCDH9-203ENST00000456367 VWA3AA6NCI4 1184 aa5.51□□□□□ -1.53
PCDH9-203ENST00000456367 MFAP3LO75121 409 aa5.51□□□□□ -1.53
PCDH9-203ENST00000456367 NDUFA10O95299 355 aa5.51□□□□□ -1.53
PCDH9-203ENST00000456367 STMN1P16949 149 aa5.51□□□□□ -1.53
PCDH9-203ENST00000456367 CCND1P24385 295 aa5.51□□□□□ -1.53
PCDH9-203ENST00000456367 GGCXP38435 758 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms