RNA–Protein interactions for RNA: ENST00000455546.6

GTF3C3-208, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 4

Gene GTF3C3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-208ENST00000455546 API5Q9BZZ5 524 aaKnown RBP5.82□□□□□ -1.48
GTF3C3-208ENST00000455546 ARHGAP39Q9C0H5 1083 aa5.82□□□□□ -1.48
GTF3C3-208ENST00000455546 EFCC1Q9HA90 598 aa5.82□□□□□ -1.48
GTF3C3-208ENST00000455546 ZFYVE28Q9HCC9 887 aa5.82□□□□□ -1.48
GTF3C3-208ENST00000455546 SUGT1Q9Y2Z0 365 aa5.82□□□□□ -1.48
GTF3C3-208ENST00000455546 DAGLAQ9Y4D2 1042 aa5.82□□□□□ -1.48
GTF3C3-208ENST00000455546 PCDHB11Q9Y5F2 797 aa5.82□□□□□ -1.48
GTF3C3-208ENST00000455546 SNCAIPQ9Y6H5 919 aa5.82□□□□□ -1.48
GTF3C3-208ENST00000455546 MAST3O60307 1309 aa5.81□□□□□ -1.48
GTF3C3-208ENST00000455546 USP17L15C9J2P7 530 aa5.81□□□□□ -1.48
GTF3C3-208ENST00000455546 USP17L10C9JJH3 530 aa5.81□□□□□ -1.48
GTF3C3-208ENST00000455546 USP17L13C9JLJ4 530 aa5.81□□□□□ -1.48
GTF3C3-208ENST00000455546 USP17L12C9JPN9 530 aa5.81□□□□□ -1.48
GTF3C3-208ENST00000455546 USP17L11C9JVI0 530 aa5.81□□□□□ -1.48
GTF3C3-208ENST00000455546 USP17L21D6R901 530 aa5.81□□□□□ -1.48
GTF3C3-208ENST00000455546 USP17L18D6R9N7 530 aa5.81□□□□□ -1.48
GTF3C3-208ENST00000455546 USP17L22D6RA61 530 aa5.81□□□□□ -1.48
GTF3C3-208ENST00000455546 USP17L17D6RBQ6 530 aa5.81□□□□□ -1.48
GTF3C3-208ENST00000455546 USP17L19D6RCP7 530 aa5.81□□□□□ -1.48
GTF3C3-208ENST00000455546 USP17L20D6RJB6 530 aa5.81□□□□□ -1.48
GTF3C3-208ENST00000455546 SRGAP3O43295 1099 aa5.81□□□□□ -1.48
GTF3C3-208ENST00000455546 EN2P19622 333 aaPredicted RBP5.81□□□□□ -1.48
GTF3C3-208ENST00000455546 FSHRP23945 695 aa5.81□□□□□ -1.48
GTF3C3-208ENST00000455546 IL15P40933 162 aaPredicted RBP5.81□□□□□ -1.48
GTF3C3-208ENST00000455546 RPIAP49247 311 aa5.81□□□□□ -1.48
GTF3C3-208ENST00000455546 WNT7BP56706 349 aa5.81□□□□□ -1.48
GTF3C3-208ENST00000455546 MCCD1P59942 119 aaPredicted RBP5.81□□□□□ -1.48
GTF3C3-208ENST00000455546 USP17L24Q0WX57 530 aa5.81□□□□□ -1.48
GTF3C3-208ENST00000455546 EML3Q32P44 896 aa5.81□□□□□ -1.48
GTF3C3-208ENST00000455546 INTS3Q68E01 1043 aaKnown RBP5.81□□□□□ -1.48
GTF3C3-208ENST00000455546 FAM83AQ86UY5 434 aa5.81□□□□□ -1.48
GTF3C3-208ENST00000455546 PLEKHM2Q8IWE5 1019 aa5.81□□□□□ -1.48
GTF3C3-208ENST00000455546 TRMT44Q8IYL2 757 aaKnown RBP5.81□□□□□ -1.48
GTF3C3-208ENST00000455546 FAM151AQ8WW52 585 aa5.81□□□□□ -1.48
GTF3C3-208ENST00000455546 XAGE2Q96GT9 111 aa5.81□□□□□ -1.48
GTF3C3-208ENST00000455546 KCTD15Q96SI1 283 aaPredicted RBP5.81□□□□□ -1.48
GTF3C3-208ENST00000455546 ZNF341Q9BYN7 854 aa5.81□□□□□ -1.48
GTF3C3-208ENST00000455546 COPRSQ9NQ92 184 aa5.81□□□□□ -1.48
GTF3C3-208ENST00000455546 GNL3LQ9NVN8 582 aaKnown RBP5.81□□□□□ -1.48
GTF3C3-208ENST00000455546 ABCF2Q9UG63 623 aa5.81□□□□□ -1.48
GTF3C3-208ENST00000455546 CPA4Q9UI42 421 aa5.81□□□□□ -1.48
GTF3C3-208ENST00000455546 DENND2AQ9ULE3 1009 aa5.81□□□□□ -1.48
GTF3C3-208ENST00000455546 ZMIZ1Q9ULJ6 1067 aa5.81□□□□□ -1.48
GTF3C3-208ENST00000455546 KIF16BQ96L93 1317 aa5.8□□□□□ -1.48
GTF3C3-208ENST00000455546 MGAMO43451 1857 aa5.8□□□□□ -1.48
GTF3C3-208ENST00000455546 PNMA6EA0A0J9YXQ4 647 aa5.8□□□□□ -1.48
GTF3C3-208ENST00000455546 A0A1B0GUL7 405 aa5.8□□□□□ -1.48
GTF3C3-208ENST00000455546 DDTLA6NHG4 134 aaPredicted RBP5.8□□□□□ -1.48
GTF3C3-208ENST00000455546 CCER2I3L3R5 266 aa5.8□□□□□ -1.48
GTF3C3-208ENST00000455546 ATG7O95352 703 aa5.8□□□□□ -1.48
GTF3C3-208ENST00000455546 CT47B1P0C2W7 299 aaPredicted RBP5.8□□□□□ -1.48
GTF3C3-208ENST00000455546 CETPP11597 493 aa5.8□□□□□ -1.48
GTF3C3-208ENST00000455546 TRIM27P14373 513 aa5.8□□□□□ -1.48
GTF3C3-208ENST00000455546 RASA1P20936 1047 aa5.8□□□□□ -1.48
GTF3C3-208ENST00000455546 VARSP26640 1264 aaKnown RBP5.8□□□□□ -1.48
GTF3C3-208ENST00000455546 CTGFP29279 349 aa5.8□□□□□ -1.48
GTF3C3-208ENST00000455546 SLC19A1P41440 591 aa5.8□□□□□ -1.48
GTF3C3-208ENST00000455546 RGS3P49796 1198 aa5.8□□□□□ -1.48
GTF3C3-208ENST00000455546 SNAPC2Q13487 334 aa5.8□□□□□ -1.48
GTF3C3-208ENST00000455546 PICALMQ13492 652 aa5.8□□□□□ -1.48
GTF3C3-208ENST00000455546 RASGRF1Q13972 1273 aa5.8□□□□□ -1.48
GTF3C3-208ENST00000455546 INTS6LQ5JSJ4 861 aaKnown RBP5.8□□□□□ -1.48
GTF3C3-208ENST00000455546 FKBP1CQ5VVH2 108 aa5.8□□□□□ -1.48
GTF3C3-208ENST00000455546 DCAF15Q66K64 600 aa5.8□□□□□ -1.48
GTF3C3-208ENST00000455546 PI16Q6UXB8 463 aa5.8□□□□□ -1.48
GTF3C3-208ENST00000455546 ARHGAP45Q92619 1136 aa5.8□□□□□ -1.48
GTF3C3-208ENST00000455546 TRAIPQ9BWF2 469 aa5.8□□□□□ -1.48
GTF3C3-208ENST00000455546 PLA2G2EQ9NZK7 142 aa5.8□□□□□ -1.48
GTF3C3-208ENST00000455546 FRMD4AQ9P2Q2 1039 aaPredicted RBP5.8□□□□□ -1.48
GTF3C3-208ENST00000455546 ZNF112Q9UJU3 913 aa5.8□□□□□ -1.48
GTF3C3-208ENST00000455546 NOVA2Q9UNW9 492 aaKnown RBP5.8□□□□□ -1.48
GTF3C3-208ENST00000455546 PTCH2Q9Y6C5 1203 aa5.8□□□□□ -1.48
GTF3C3-208ENST00000455546 PHF20L1A8MW92 1017 aa5.79□□□□□ -1.48
GTF3C3-208ENST00000455546 ESPNB1AK53 854 aa5.79□□□□□ -1.48
GTF3C3-208ENST00000455546 PDHXO00330 501 aa5.79□□□□□ -1.48
GTF3C3-208ENST00000455546 TLR2O60603 784 aa5.79□□□□□ -1.48
GTF3C3-208ENST00000455546 LGR5O75473 907 aa5.79□□□□□ -1.48
GTF3C3-208ENST00000455546 CD2BP2O95400 341 aaKnown RBP5.79□□□□□ -1.48
GTF3C3-208ENST00000455546 GNAI3P08754 354 aa5.79□□□□□ -1.48
GTF3C3-208ENST00000455546 CYP2C8P10632 490 aa5.79□□□□□ -1.48
GTF3C3-208ENST00000455546 SCTRP47872 440 aa5.79□□□□□ -1.48
GTF3C3-208ENST00000455546 LACTBP83111 547 aaPredicted RBP5.79□□□□□ -1.48
GTF3C3-208ENST00000455546 MECOMQ03112 1051 aa5.79□□□□□ -1.48
GTF3C3-208ENST00000455546 PPATQ06203 517 aa5.79□□□□□ -1.48
GTF3C3-208ENST00000455546 FOXC1Q12948 553 aa5.79□□□□□ -1.48
GTF3C3-208ENST00000455546 PPIL2Q13356 520 aa5.79□□□□□ -1.48
GTF3C3-208ENST00000455546 MOGSQ13724 837 aa5.79□□□□□ -1.48
GTF3C3-208ENST00000455546 TMEM164Q5U3C3 297 aa5.79□□□□□ -1.48
GTF3C3-208ENST00000455546 ATF7IPQ6VMQ6 1270 aa5.79□□□□□ -1.48
GTF3C3-208ENST00000455546 CCDC84Q86UT8 332 aaPredicted RBP5.79□□□□□ -1.48
GTF3C3-208ENST00000455546 ZSCAN29Q8IWY8 852 aaPredicted RBP5.79□□□□□ -1.48
GTF3C3-208ENST00000455546 TMEM57Q8N5G2 664 aa5.79□□□□□ -1.48
GTF3C3-208ENST00000455546 SH3TC2Q8TF17 1288 aa5.79□□□□□ -1.48
GTF3C3-208ENST00000455546 ZNF384Q8TF68 577 aa5.79□□□□□ -1.48
GTF3C3-208ENST00000455546 HOOK2Q96ED9 719 aa5.79□□□□□ -1.48
GTF3C3-208ENST00000455546 DDX4Q9NQI0 724 aaKnown RBP5.79□□□□□ -1.48
GTF3C3-208ENST00000455546 TMPRSS4Q9NRS4 437 aa5.79□□□□□ -1.48
GTF3C3-208ENST00000455546 HMG20BQ9P0W2 317 aa5.79□□□□□ -1.48
GTF3C3-208ENST00000455546 KIAA1024Q9UPX6 916 aa5.79□□□□□ -1.48
GTF3C3-208ENST00000455546 HDAC5Q9UQL6 1122 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 91.8 ms