RNA–Protein interactions for RNA: ENST00000455383.5

MSH6-206, Transcript of mutS homolog 6, humanhuman

TSL 5

Gene MSH6, Length 578 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-206ENST00000455383 SLC9C2Q5TAH2 1124 aa22.66■■□□□ 1.22
MSH6-206ENST00000455383 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.66■■□□□ 1.22
MSH6-206ENST00000455383 MCM9Q9NXL9 1143 aa22.66■■□□□ 1.22
MSH6-206ENST00000455383 DNAH12Q6ZR08 3092 aa22.66■■□□□ 1.22
MSH6-206ENST00000455383 ADORA2AP29274 412 aa22.65■■□□□ 1.22
MSH6-206ENST00000455383 KIAA1755Q5JYT7 1200 aa22.65■■□□□ 1.22
MSH6-206ENST00000455383 RHPN1Q8TCX5 695 aa22.65■■□□□ 1.22
MSH6-206ENST00000455383 SPATC1LQ9H0A9 340 aa22.65■■□□□ 1.22
MSH6-206ENST00000455383 DCP1AQ9NPI6 582 aaPredicted RBP22.65■■□□□ 1.22
MSH6-206ENST00000455383 ZNF532Q9HCE3 1301 aa22.64■■□□□ 1.22
MSH6-206ENST00000455383 COBLO75128 1261 aa22.64■■□□□ 1.21
MSH6-206ENST00000455383 ATN1P54259 1190 aaPredicted RBP22.64■■□□□ 1.21
MSH6-206ENST00000455383 RTP1P59025 263 aa22.64■■□□□ 1.21
MSH6-206ENST00000455383 HSP90AB4PQ58FF6 505 aa22.64■■□□□ 1.21
MSH6-206ENST00000455383 TMEM179Q6ZVK1 233 aa22.64■■□□□ 1.21
MSH6-206ENST00000455383 DPP9Q86TI2 863 aa22.64■■□□□ 1.21
MSH6-206ENST00000455383 SIAH1Q8IUQ4 282 aa22.64■■□□□ 1.21
MSH6-206ENST00000455383 MB21D1Q8N884 522 aa22.64■■□□□ 1.21
MSH6-206ENST00000455383 LBHD1Q9BQE6 289 aaPredicted RBP22.64■■□□□ 1.21
MSH6-206ENST00000455383 IL1RAPL2Q9NP60 686 aa22.64■■□□□ 1.21
MSH6-206ENST00000455383 ERCC3P19447 782 aa22.63■■□□□ 1.21
MSH6-206ENST00000455383 DSG3P32926 999 aa22.63■■□□□ 1.21
MSH6-206ENST00000455383 ABRAQ8N0Z2 381 aa22.63■■□□□ 1.21
MSH6-206ENST00000455383 ARRDC4Q8NCT1 418 aa22.63■■□□□ 1.21
MSH6-206ENST00000455383 SDR42E1Q8WUS8 393 aa22.63■■□□□ 1.21
MSH6-206ENST00000455383 LTBP2Q14767 1821 aa22.63■■□□□ 1.21
MSH6-206ENST00000455383 MPHOSPH10O00566 681 aaKnown RBP22.62■■□□□ 1.21
MSH6-206ENST00000455383 SEPT4O43236 478 aa22.62■■□□□ 1.21
MSH6-206ENST00000455383 GJC2Q5T442 439 aaPredicted RBP22.62■■□□□ 1.21
MSH6-206ENST00000455383 LCORLQ8N3X6 602 aa22.62■■□□□ 1.21
MSH6-206ENST00000455383 SLC44A5Q8NCS7 719 aa22.62■■□□□ 1.21
MSH6-206ENST00000455383 GUCD1Q96NT3 240 aa22.62■■□□□ 1.21
MSH6-206ENST00000455383 TANGO6Q9C0B7 1094 aa22.62■■□□□ 1.21
MSH6-206ENST00000455383 MROH8Q9H579 483 aa22.62■■□□□ 1.21
MSH6-206ENST00000455383 SWAP70Q9UH65 585 aa22.62■■□□□ 1.21
MSH6-206ENST00000455383 CYP2D6P10635 497 aa22.61■■□□□ 1.21
MSH6-206ENST00000455383 SNX17Q15036 470 aa22.61■■□□□ 1.21
MSH6-206ENST00000455383 SLC39A5Q6ZMH5 540 aa22.61■■□□□ 1.21
MSH6-206ENST00000455383 TMX2Q9Y320 296 aa22.61■■□□□ 1.21
MSH6-206ENST00000455383 CUL9Q8IWT3 2517 aa22.6■■□□□ 1.21
MSH6-206ENST00000455383 GOLIM4O00461 696 aa22.59■■□□□ 1.21
MSH6-206ENST00000455383 CLASRPQ8N2M8 674 aaKnown RBP22.59■■□□□ 1.21
MSH6-206ENST00000455383 PANK1Q8TE04 598 aa22.59■■□□□ 1.21
MSH6-206ENST00000455383 KIF1BPQ96EK5 621 aa22.59■■□□□ 1.21
MSH6-206ENST00000455383 DYNLL2Q96FJ2 89 aa22.59■■□□□ 1.21
MSH6-206ENST00000455383 VCPKMTQ9H867 229 aa22.59■■□□□ 1.21
MSH6-206ENST00000455383 SLC5A4Q9NY91 659 aa22.59■■□□□ 1.21
MSH6-206ENST00000455383 PRKAG2Q9UGJ0 569 aa22.59■■□□□ 1.21
MSH6-206ENST00000455383 AKR1B1P15121 316 aa22.58■■□□□ 1.21
MSH6-206ENST00000455383 C1orf53Q5VUE5 145 aa22.58■■□□□ 1.21
MSH6-206ENST00000455383 ATG4CQ96DT6 458 aa22.58■■□□□ 1.21
MSH6-206ENST00000455383 MAML3Q96JK9 1138 aa22.58■■□□□ 1.21
MSH6-206ENST00000455383 DNAJC2Q99543 621 aaKnown RBP22.58■■□□□ 1.21
MSH6-206ENST00000455383 ARMT1Q9H993 441 aa22.58■■□□□ 1.21
MSH6-206ENST00000455383 ARHGEF10LQ9HCE6 1279 aa22.58■■□□□ 1.21
MSH6-206ENST00000455383 ATP8A2Q9NTI2 1148 aa22.58■■□□□ 1.21
MSH6-206ENST00000455383 ADAMTS5Q9UNA0 930 aa22.58■■□□□ 1.21
MSH6-206ENST00000455383 ATP11BQ9Y2G3 1177 aa22.58■■□□□ 1.21
MSH6-206ENST00000455383 LAMA2P24043 3122 aaKnown RBP22.57■■□□□ 1.2
MSH6-206ENST00000455383 PARP14Q460N5 1801 aa22.57■■□□□ 1.2
MSH6-206ENST00000455383 KBTBD13C9JR72 458 aa22.57■■□□□ 1.2
MSH6-206ENST00000455383 FLOT1O75955 427 aa22.57■■□□□ 1.2
MSH6-206ENST00000455383 HNRNPUQ00839 825 aaKnown RBP eCLIP22.57■■□□□ 1.21e-6■□□□□ 11
MSH6-206ENST00000455383 ICA1Q05084 483 aa22.57■■□□□ 1.2
MSH6-206ENST00000455383 PRAMEF19Q5SWL8 479 aa22.57■■□□□ 1.2
MSH6-206ENST00000455383 ANO1Q5XXA6 986 aa22.57■■□□□ 1.2
MSH6-206ENST00000455383 NCAPG2Q86XI2 1143 aa22.57■■□□□ 1.2
MSH6-206ENST00000455383 CLEC10AQ8IUN9 316 aa22.57■■□□□ 1.2
MSH6-206ENST00000455383 CCDC17Q96LX7 622 aa22.57■■□□□ 1.2
MSH6-206ENST00000455383 SH2D4AQ9H788 454 aa22.57■■□□□ 1.2
MSH6-206ENST00000455383 UNC80Q8N2C7 3258 aa22.57■■□□□ 1.2
MSH6-206ENST00000455383 WDR46O15213 610 aaKnown RBP22.56■■□□□ 1.2
MSH6-206ENST00000455383 PRKAB2O43741 272 aa22.56■■□□□ 1.2
MSH6-206ENST00000455383 ADD2P35612 726 aa22.56■■□□□ 1.2
MSH6-206ENST00000455383 TMEM132BQ14DG7 1078 aa22.56■■□□□ 1.2
MSH6-206ENST00000455383 LRRC41Q15345 812 aa22.56■■□□□ 1.2
MSH6-206ENST00000455383 SHHQ15465 462 aa22.56■■□□□ 1.2
MSH6-206ENST00000455383 TRIM60Q495X7 471 aa22.56■■□□□ 1.2
MSH6-206ENST00000455383 C12orf60Q5U649 245 aa22.56■■□□□ 1.2
MSH6-206ENST00000455383 SIRT2Q8IXJ6 389 aa22.56■■□□□ 1.2
MSH6-206ENST00000455383 RPAP2Q8IXW5 612 aaPredicted RBP22.56■■□□□ 1.2
MSH6-206ENST00000455383 NRBP1Q9UHY1 535 aa22.56■■□□□ 1.2
MSH6-206ENST00000455383 SLC25A27O95847 323 aa22.55■■□□□ 1.2
MSH6-206ENST00000455383 IFIT2P09913 472 aaKnown RBP22.55■■□□□ 1.2
MSH6-206ENST00000455383 FCER1AP12319 257 aa22.55■■□□□ 1.2
MSH6-206ENST00000455383 PLS1Q14651 629 aa22.55■■□□□ 1.2
MSH6-206ENST00000455383 SLFNL1Q499Z3 407 aa22.55■■□□□ 1.2
MSH6-206ENST00000455383 SPICE1Q8N0Z3 855 aa22.55■■□□□ 1.2
MSH6-206ENST00000455383 PDLIM7Q9NR12 457 aa22.55■■□□□ 1.2
MSH6-206ENST00000455383 SMIM22K7EJ46 135 aa22.54■■□□□ 1.2
MSH6-206ENST00000455383 MBD4O95243 580 aa22.54■■□□□ 1.2
MSH6-206ENST00000455383 ADCYAP1R1P41586 468 aa22.54■■□□□ 1.2
MSH6-206ENST00000455383 CDK8P49336 464 aa22.54■■□□□ 1.2
MSH6-206ENST00000455383 FAM47AQ5JRC9 791 aa22.54■■□□□ 1.2
MSH6-206ENST00000455383 C9orf50Q5SZB4 431 aa22.54■■□□□ 1.2
MSH6-206ENST00000455383 ZNF697Q5TEC3 545 aa22.54■■□□□ 1.2
MSH6-206ENST00000455383 PAG1Q9NWQ8 432 aa22.54■■□□□ 1.2
MSH6-206ENST00000455383 MYH8P13535 1937 aa22.53■■□□□ 1.2
MSH6-206ENST00000455383 C16orf86Q6ZW13 317 aa22.53■■□□□ 1.2
MSH6-206ENST00000455383 RIOX2Q8IUF8 465 aa22.53■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms