RNA–Protein interactions for RNA: ENST00000454583.6

RIF1-207, Transcript of replication timing regulatory factor 1, humanhuman

TSL 2

Gene RIF1, Length 3,552 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-207ENST00000454583 GRIN3BO60391 1043 aa5.86□□□□□ -1.47
RIF1-207ENST00000454583 HOXA7P31268 230 aaPredicted RBP5.86□□□□□ -1.47
RIF1-207ENST00000454583 NKX3-2P78367 333 aa5.86□□□□□ -1.47
RIF1-207ENST00000454583 KRT32Q14532 448 aa5.86□□□□□ -1.47
RIF1-207ENST00000454583 CLEC4DQ8WXI8 215 aa5.86□□□□□ -1.47
RIF1-207ENST00000454583 USP6NLQ92738 828 aa5.86□□□□□ -1.47
RIF1-207ENST00000454583 WNK4Q96J92 1243 aa5.86□□□□□ -1.47
RIF1-207ENST00000454583 CRNKL1Q9BZJ0 848 aaKnown RBP5.86□□□□□ -1.47
RIF1-207ENST00000454583 CWC22Q9HCG8 908 aaKnown RBP5.86□□□□□ -1.47
RIF1-207ENST00000454583 PI4KBQ9UBF8 816 aa5.86□□□□□ -1.47
RIF1-207ENST00000454583 ANGEL1Q9UNK9 670 aaKnown RBP5.86□□□□□ -1.47
RIF1-207ENST00000454583 PTPRAP18433 802 aa5.86□□□□□ -1.47
RIF1-207ENST00000454583 CASTP20810 708 aaKnown RBP5.86□□□□□ -1.47
RIF1-207ENST00000454583 PTPAQ15257 358 aa5.86□□□□□ -1.47
RIF1-207ENST00000454583 TEX2Q8IWB9 1127 aa5.86□□□□□ -1.47
RIF1-207ENST00000454583 STAG2Q8N3U4 1231 aa5.86□□□□□ -1.47
RIF1-207ENST00000454583 CRACR2BQ8N4Y2 399 aaPredicted RBP5.86□□□□□ -1.47
RIF1-207ENST00000454583 KIAA1683Q9H0B3 1180 aa5.86□□□□□ -1.47
RIF1-207ENST00000454583 CNNM2Q9H8M5 875 aa5.86□□□□□ -1.47
RIF1-207ENST00000454583 RYDENQ9NUL5 291 aaKnown RBP5.86□□□□□ -1.47
RIF1-207ENST00000454583 ZBTB21Q9ULJ3 1066 aa5.86□□□□□ -1.47
RIF1-207ENST00000454583 PIK3CDO00329 1044 aa5.86□□□□□ -1.47
RIF1-207ENST00000454583 BAG4O95429 457 aaKnown RBP5.86□□□□□ -1.47
RIF1-207ENST00000454583 GTF2E1P29083 439 aaPredicted RBP5.86□□□□□ -1.47
RIF1-207ENST00000454583 FMR1Q06787 632 aaKnown RBP eCLIP5.86□□□□□ -1.472e-6■■■■■ 27.8
RIF1-207ENST00000454583 MAMDC4Q6UXC1 1216 aa5.86□□□□□ -1.47
RIF1-207ENST00000454583 ZNF467Q7Z7K2 595 aaPredicted RBP5.86□□□□□ -1.47
RIF1-207ENST00000454583 NCOA7Q8NI08 942 aa5.86□□□□□ -1.47
RIF1-207ENST00000454583 LENG9Q96B70 501 aa5.86□□□□□ -1.47
RIF1-207ENST00000454583 AIDAQ96BJ3 306 aa5.86□□□□□ -1.47
RIF1-207ENST00000454583 PTPN18Q99952 460 aa5.86□□□□□ -1.47
RIF1-207ENST00000454583 LRP2BPQ9P2M1 347 aa5.86□□□□□ -1.47
RIF1-207ENST00000454583 STXBP3O00186 592 aa5.85□□□□□ -1.47
RIF1-207ENST00000454583 PRPF3O43395 683 aaKnown RBP5.85□□□□□ -1.47
RIF1-207ENST00000454583 PRC1O43663 620 aa5.85□□□□□ -1.47
RIF1-207ENST00000454583 CTNND1O60716 968 aaKnown RBP5.85□□□□□ -1.47
RIF1-207ENST00000454583 LDHCP07864 332 aa5.85□□□□□ -1.47
RIF1-207ENST00000454583 IL17AQ16552 155 aa5.85□□□□□ -1.47
RIF1-207ENST00000454583 TEX11Q8IYF3 940 aa5.85□□□□□ -1.47
RIF1-207ENST00000454583 KRT23Q9C075 422 aa5.85□□□□□ -1.47
RIF1-207ENST00000454583 CTNNA3Q9UI47 895 aa5.85□□□□□ -1.47
RIF1-207ENST00000454583 SERPINB13Q9UIV8 391 aa5.85□□□□□ -1.47
RIF1-207ENST00000454583 PFASO15067 1338 aa5.85□□□□□ -1.47
RIF1-207ENST00000454583 NLRC5Q86WI3 1866 aa5.85□□□□□ -1.47
RIF1-207ENST00000454583 ESYT2A0FGR8 921 aa5.85□□□□□ -1.47
RIF1-207ENST00000454583 SPDYE5A6NIY4 337 aa5.85□□□□□ -1.47
RIF1-207ENST00000454583 ADM5C9JUS6 153 aa5.85□□□□□ -1.47
RIF1-207ENST00000454583 CTGFP29279 349 aa5.85□□□□□ -1.47
RIF1-207ENST00000454583 EPHX2P34913 555 aa5.85□□□□□ -1.47
RIF1-207ENST00000454583 ZNF543Q08ER8 600 aa5.85□□□□□ -1.47
RIF1-207ENST00000454583 DGKZQ13574 1117 aa5.85□□□□□ -1.47
RIF1-207ENST00000454583 CLEC10AQ8IUN9 316 aa5.85□□□□□ -1.47
RIF1-207ENST00000454583 APOBEC3FQ8IUX4 373 aaKnown RBP5.85□□□□□ -1.47
RIF1-207ENST00000454583 CDCA5Q96FF9 252 aa5.85□□□□□ -1.47
RIF1-207ENST00000454583 PDLIM2Q96JY6 352 aa5.85□□□□□ -1.47
RIF1-207ENST00000454583 ANO2Q9NQ90 1003 aa5.85□□□□□ -1.47
RIF1-207ENST00000454583 LIMCH1Q9UPQ0 1083 aa5.85□□□□□ -1.47
RIF1-207ENST00000454583 ZNF213O14771 459 aa5.85□□□□□ -1.47
RIF1-207ENST00000454583 PLEKHA8P1O95397 391 aa5.85□□□□□ -1.47
RIF1-207ENST00000454583 DEKP35659 375 aaKnown RBP5.85□□□□□ -1.47
RIF1-207ENST00000454583 MCM2P49736 904 aa5.85□□□□□ -1.47
RIF1-207ENST00000454583 BECN1Q14457 450 aa5.85□□□□□ -1.47
RIF1-207ENST00000454583 RASA3Q14644 834 aa5.85□□□□□ -1.47
RIF1-207ENST00000454583 ANGEL2Q5VTE6 544 aaKnown RBP5.85□□□□□ -1.47
RIF1-207ENST00000454583 NPM2Q86SE8 214 aaKnown RBP5.85□□□□□ -1.47
RIF1-207ENST00000454583 SLF2Q8IX21 1173 aa5.85□□□□□ -1.47
RIF1-207ENST00000454583 KCNN1Q92952 543 aa5.85□□□□□ -1.47
RIF1-207ENST00000454583 RAI14Q9P0K7 980 aa5.85□□□□□ -1.47
RIF1-207ENST00000454583 DNAJC25-GNG10A0A024R161 153 aa5.84□□□□□ -1.47
RIF1-207ENST00000454583 MCM5P33992 734 aa5.84□□□□□ -1.47
RIF1-207ENST00000454583 ECE1P42892 770 aa5.84□□□□□ -1.47
RIF1-207ENST00000454583 HSD17B4P51659 736 aa5.84□□□□□ -1.47
RIF1-207ENST00000454583 APOBRQ0VD83 1088 aa5.84□□□□□ -1.47
RIF1-207ENST00000454583 IMMTQ16891 758 aaKnown RBP5.84□□□□□ -1.47
RIF1-207ENST00000454583 JAKMIP1Q96N16 626 aaKnown RBP5.84□□□□□ -1.47
RIF1-207ENST00000454583 JMJD4Q9H9V9 463 aa5.84□□□□□ -1.47
RIF1-207ENST00000454583 RNF181Q9P0P0 153 aa5.84□□□□□ -1.47
RIF1-207ENST00000454583 MYPNQ86TC9 1320 aa5.84□□□□□ -1.47
RIF1-207ENST00000454583 MEIS2O14770 477 aa5.84□□□□□ -1.47
RIF1-207ENST00000454583 JAK2O60674 1132 aa5.84□□□□□ -1.47
RIF1-207ENST00000454583 KDM4AO75164 1064 aa5.84□□□□□ -1.47
RIF1-207ENST00000454583 BAG3O95817 575 aa5.84□□□□□ -1.47
RIF1-207ENST00000454583 SPIRE1Q08AE8 756 aa5.84□□□□□ -1.47
RIF1-207ENST00000454583 CHAF1AQ13111 956 aaPredicted RBP5.84□□□□□ -1.47
RIF1-207ENST00000454583 PFKFB3Q16875 520 aaPredicted RBP5.84□□□□□ -1.47
RIF1-207ENST00000454583 KLHL40Q2TBA0 621 aa5.84□□□□□ -1.47
RIF1-207ENST00000454583 LRRFIP1Q32MZ4 808 aaKnown RBP5.84□□□□□ -1.47
RIF1-207ENST00000454583 NOM1Q5C9Z4 860 aaKnown RBP5.84□□□□□ -1.47
RIF1-207ENST00000454583 DZIP1Q86YF9 867 aaKnown RBP5.84□□□□□ -1.47
RIF1-207ENST00000454583 SCYL3Q8IZE3 742 aa5.84□□□□□ -1.47
RIF1-207ENST00000454583 SH3GLB2Q9NR46 395 aa5.84□□□□□ -1.47
RIF1-207ENST00000454583 EIF2AK3Q9NZJ5 1116 aaKnown RBP5.84□□□□□ -1.47
RIF1-207ENST00000454583 ZNF214Q9UL59 606 aaPredicted RBP5.84□□□□□ -1.47
RIF1-207ENST00000454583 TLL2Q9Y6L7 1015 aa5.84□□□□□ -1.47
RIF1-207ENST00000454583 MKI67P46013 3256 aaKnown RBP5.84□□□□□ -1.48
RIF1-207ENST00000454583 GBF1Q92538 1859 aa5.83□□□□□ -1.48
RIF1-207ENST00000454583 CYP3A7-CYP3A51PA0A087WV96 503 aa5.83□□□□□ -1.48
RIF1-207ENST00000454583 CYP3A7P24462 503 aa5.83□□□□□ -1.48
RIF1-207ENST00000454583 HAND2P61296 217 aa5.83□□□□□ -1.48
RIF1-207ENST00000454583 TMEM179Q6ZVK1 233 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms