RNA–Protein interactions for RNA: ENST00000453858.1

SBDSP1-204, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

BASIC

Gene SBDSP1, Length 737 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-204ENST00000453858 POU3F3P20264 500 aaPredicted RBP7.08□□□□□ -1.28
SBDSP1-204ENST00000453858 RPS8P62241 208 aaKnown RBP7.08□□□□□ -1.28
SBDSP1-204ENST00000453858 PPIL2Q13356 520 aa7.08□□□□□ -1.28
SBDSP1-204ENST00000453858 MAP7D1Q3KQU3 841 aa7.08□□□□□ -1.28
SBDSP1-204ENST00000453858 NGEFQ8N5V2 710 aa7.08□□□□□ -1.28
SBDSP1-204ENST00000453858 PRMT6Q96LA8 375 aaPredicted RBP7.08□□□□□ -1.28
SBDSP1-204ENST00000453858 ATRNL1Q5VV63 1379 aa7.08□□□□□ -1.28
SBDSP1-204ENST00000453858 MYO3BQ8WXR4 1341 aa7.07□□□□□ -1.28
SBDSP1-204ENST00000453858 WDFY3Q8IZQ1 3526 aa7.07□□□□□ -1.28
SBDSP1-204ENST00000453858 ESPNB1AK53 854 aa7.07□□□□□ -1.28
SBDSP1-204ENST00000453858 CYP2C8P10632 490 aa7.07□□□□□ -1.28
SBDSP1-204ENST00000453858 DHX9Q08211 1270 aaKnown RBP7.07□□□□□ -1.28
SBDSP1-204ENST00000453858 NR5A1Q13285 461 aa7.07□□□□□ -1.28
SBDSP1-204ENST00000453858 VASH1Q7L8A9 365 aaPredicted RBP7.07□□□□□ -1.28
SBDSP1-204ENST00000453858 LRP10Q7Z4F1 713 aa7.07□□□□□ -1.28
SBDSP1-204ENST00000453858 NLRP10Q86W26 655 aa7.07□□□□□ -1.28
SBDSP1-204ENST00000453858 GJD3Q8N144 294 aa7.07□□□□□ -1.28
SBDSP1-204ENST00000453858 SNIP1Q8TAD8 396 aaKnown RBP7.07□□□□□ -1.28
SBDSP1-204ENST00000453858 MRGPRX2Q96LB1 330 aa7.07□□□□□ -1.28
SBDSP1-204ENST00000453858 SENP6Q9GZR1 1112 aaPredicted RBP7.07□□□□□ -1.28
SBDSP1-204ENST00000453858 GGA1Q9UJY5 639 aa7.07□□□□□ -1.28
SBDSP1-204ENST00000453858 COG5Q9UP83 839 aa7.07□□□□□ -1.28
SBDSP1-204ENST00000453858 TECTAO75443 2155 aa7.07□□□□□ -1.28
SBDSP1-204ENST00000453858 GRXCR1A8MXD5 290 aa7.06□□□□□ -1.28
SBDSP1-204ENST00000453858 PROB1E7EW31 1015 aa7.06□□□□□ -1.28
SBDSP1-204ENST00000453858 TNPO2O14787 897 aaKnown RBP7.06□□□□□ -1.28
SBDSP1-204ENST00000453858 RTP1P59025 263 aa7.06□□□□□ -1.28
SBDSP1-204ENST00000453858 DLGAP5Q15398 846 aa7.06□□□□□ -1.28
SBDSP1-204ENST00000453858 RASIP1Q5U651 963 aa7.06□□□□□ -1.28
SBDSP1-204ENST00000453858 ASCL5Q7RTU5 278 aa7.06□□□□□ -1.28
SBDSP1-204ENST00000453858 RNF135Q8IUD6 432 aa7.06□□□□□ -1.28
SBDSP1-204ENST00000453858 KIAA0825Q8IV33 1275 aa7.06□□□□□ -1.28
SBDSP1-204ENST00000453858 FAM178BQ8IXR5 827 aa7.06□□□□□ -1.28
SBDSP1-204ENST00000453858 PHTF2Q8N3S3 785 aa7.06□□□□□ -1.28
SBDSP1-204ENST00000453858 CCDC82Q8N4S0 544 aa7.06□□□□□ -1.28
SBDSP1-204ENST00000453858 KCTD15Q96SI1 283 aaPredicted RBP7.06□□□□□ -1.28
SBDSP1-204ENST00000453858 PPP1R12CQ9BZL4 782 aa7.06□□□□□ -1.28
SBDSP1-204ENST00000453858 C1orf115Q9H7X2 142 aa7.06□□□□□ -1.28
SBDSP1-204ENST00000453858 PRKAG2Q9UGJ0 569 aa7.06□□□□□ -1.28
SBDSP1-204ENST00000453858 KCNH4Q9UQ05 1017 aa7.06□□□□□ -1.28
SBDSP1-204ENST00000453858 DAGLAQ9Y4D2 1042 aa7.06□□□□□ -1.28
SBDSP1-204ENST00000453858 CEP295Q9C0D2 2601 aa7.06□□□□□ -1.28
SBDSP1-204ENST00000453858 LAMA5O15230 3695 aa7.05□□□□□ -1.28
SBDSP1-204ENST00000453858 CLRN2A0PK11 232 aa7.05□□□□□ -1.28
SBDSP1-204ENST00000453858 GNAT3A8MTJ3 354 aa7.05□□□□□ -1.28
SBDSP1-204ENST00000453858 ATP9BO43861 1147 aa7.05□□□□□ -1.28
SBDSP1-204ENST00000453858 HMOX1P09601 288 aa7.05□□□□□ -1.28
SBDSP1-204ENST00000453858 PPATQ06203 517 aa7.05□□□□□ -1.28
SBDSP1-204ENST00000453858 KIF6Q6ZMV9 814 aa7.05□□□□□ -1.28
SBDSP1-204ENST00000453858 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.05□□□□□ -1.28
SBDSP1-204ENST00000453858 TRIB2Q92519 343 aa7.05□□□□□ -1.28
SBDSP1-204ENST00000453858 ZKSCAN4Q969J2 545 aaPredicted RBP7.05□□□□□ -1.28
SBDSP1-204ENST00000453858 MFSD14AQ96MC6 490 aa7.05□□□□□ -1.28
SBDSP1-204ENST00000453858 PDLIM7Q9NR12 457 aa7.05□□□□□ -1.28
SBDSP1-204ENST00000453858 PKD2L1Q9P0L9 805 aa7.05□□□□□ -1.28
SBDSP1-204ENST00000453858 CSADQ9Y600 493 aa7.05□□□□□ -1.28
SBDSP1-204ENST00000453858 ITPR1Q14643 2758 aa7.05□□□□□ -1.28
SBDSP1-204ENST00000453858 PLXNA3P51805 1871 aa7.04□□□□□ -1.28
SBDSP1-204ENST00000453858 PLXNA1Q9UIW2 1896 aa7.04□□□□□ -1.28
SBDSP1-204ENST00000453858 ADH1CP00326 375 aa7.04□□□□□ -1.28
SBDSP1-204ENST00000453858 FOXC1Q12948 553 aa7.04□□□□□ -1.28
SBDSP1-204ENST00000453858 ARID5BQ14865 1188 aa7.04□□□□□ -1.28
SBDSP1-204ENST00000453858 SNX17Q15036 470 aa7.04□□□□□ -1.28
SBDSP1-204ENST00000453858 TTLL5Q6EMB2 1281 aa7.04□□□□□ -1.28
SBDSP1-204ENST00000453858 C16orf59Q7L2K0 433 aa7.04□□□□□ -1.28
SBDSP1-204ENST00000453858 CYP4X1Q8N118 509 aa7.04□□□□□ -1.28
SBDSP1-204ENST00000453858 CRIPAKQ8N1N5 446 aa7.04□□□□□ -1.28
SBDSP1-204ENST00000453858 CERS5Q8N5B7 392 aa7.04□□□□□ -1.28
SBDSP1-204ENST00000453858 ZNF775Q96BV0 537 aaPredicted RBP7.04□□□□□ -1.28
SBDSP1-204ENST00000453858 PARK7Q99497 189 aaKnown RBP7.04□□□□□ -1.28
SBDSP1-204ENST00000453858 ANKIB1Q9P2G1 1089 aa7.04□□□□□ -1.28
SBDSP1-204ENST00000453858 MTCH2Q9Y6C9 303 aa7.04□□□□□ -1.28
SBDSP1-204ENST00000453858 SH3TC1Q8TE82 1336 aa7.03□□□□□ -1.28
SBDSP1-204ENST00000453858 PALM3A6NDB9 673 aaPredicted RBP7.03□□□□□ -1.28
SBDSP1-204ENST00000453858 FAM187AA6NFU0 413 aa7.03□□□□□ -1.28
SBDSP1-204ENST00000453858 DCXO43602 365 aa7.03□□□□□ -1.28
SBDSP1-204ENST00000453858 SKIP12755 728 aa7.03□□□□□ -1.28
SBDSP1-204ENST00000453858 GRM5P41594 1212 aa7.03□□□□□ -1.28
SBDSP1-204ENST00000453858 CACNB2Q08289 660 aaPredicted RBP7.03□□□□□ -1.28
SBDSP1-204ENST00000453858 SLC39A5Q6ZMH5 540 aa7.03□□□□□ -1.28
SBDSP1-204ENST00000453858 TXNRD3Q86VQ6 643 aa7.03□□□□□ -1.28
SBDSP1-204ENST00000453858 PLEKHM2Q8IWE5 1019 aa7.03□□□□□ -1.28
SBDSP1-204ENST00000453858 COA7Q96BR5 231 aa7.03□□□□□ -1.28
SBDSP1-204ENST00000453858 FAM86C1Q9NVL1 165 aa7.03□□□□□ -1.28
SBDSP1-204ENST00000453858 TFIP11Q9UBB9 837 aaKnown RBP7.03□□□□□ -1.28
SBDSP1-204ENST00000453858 RRP7AQ9Y3A4 280 aaKnown RBP7.03□□□□□ -1.28
SBDSP1-204ENST00000453858 DMXL2Q8TDJ6 3036 aa7.03□□□□□ -1.28
SBDSP1-204ENST00000453858 TTC24A2A3L6 582 aaPredicted RBP7.02□□□□□ -1.29
SBDSP1-204ENST00000453858 AVPP01185 164 aa7.02□□□□□ -1.29
SBDSP1-204ENST00000453858 CCND3P30281 292 aaPredicted RBP7.02□□□□□ -1.29
SBDSP1-204ENST00000453858 CFAP100Q494V2 611 aa7.02□□□□□ -1.29
SBDSP1-204ENST00000453858 PLPP7Q8NBV4 271 aa7.02□□□□□ -1.29
SBDSP1-204ENST00000453858 UCN2Q96RP3 112 aa7.02□□□□□ -1.29
SBDSP1-204ENST00000453858 VEZTQ9HBM0 779 aa7.02□□□□□ -1.29
SBDSP1-204ENST00000453858 TOR4AQ9NXH8 423 aa7.02□□□□□ -1.29
SBDSP1-204ENST00000453858 TRMT112Q9UI30 125 aaKnown RBP7.02□□□□□ -1.29
SBDSP1-204ENST00000453858 ATP11BQ9Y2G3 1177 aa7.02□□□□□ -1.29
SBDSP1-204ENST00000453858 WASF2Q9Y6W5 498 aa7.02□□□□□ -1.29
SBDSP1-204ENST00000453858 COL4A6Q14031 1691 aa7.02□□□□□ -1.29
SBDSP1-204ENST00000453858 GAKO14976 1311 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms