RNA–Protein interactions for RNA: ENST00000452852.1

LINC00393-202, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 485 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-202ENST00000452852 CDH24Q86UP0 819 aa6.43□□□□□ -1.38
LINC00393-202ENST00000452852 WFDC3Q8IUB2 231 aa6.43□□□□□ -1.38
LINC00393-202ENST00000452852 STK11IPQ8N1F8 1099 aa6.43□□□□□ -1.38
LINC00393-202ENST00000452852 MISP3Q96FF7 219 aa6.43□□□□□ -1.38
LINC00393-202ENST00000452852 TNKS2Q9H2K2 1166 aa6.43□□□□□ -1.38
LINC00393-202ENST00000452852 PAK6Q9NQU5 681 aaPredicted RBP6.43□□□□□ -1.38
LINC00393-202ENST00000452852 REV1Q9UBZ9 1251 aa6.43□□□□□ -1.38
LINC00393-202ENST00000452852 PRR36Q9H6K5 1346 aa6.43□□□□□ -1.38
LINC00393-202ENST00000452852 ROBO2Q9HCK4 1378 aa6.43□□□□□ -1.38
LINC00393-202ENST00000452852 ERICH3Q5RHP9 1530 aa6.42□□□□□ -1.38
LINC00393-202ENST00000452852 TMEM265A0A087WTH1 108 aa6.42□□□□□ -1.38
LINC00393-202ENST00000452852 GNAT3A8MTJ3 354 aa6.42□□□□□ -1.38
LINC00393-202ENST00000452852 PRR33A8MZF0 331 aa6.42□□□□□ -1.38
LINC00393-202ENST00000452852 HTR3BO95264 441 aa6.42□□□□□ -1.38
LINC00393-202ENST00000452852 CD96P40200 585 aa6.42□□□□□ -1.38
LINC00393-202ENST00000452852 CRKP46108 304 aa6.42□□□□□ -1.38
LINC00393-202ENST00000452852 AOC3Q16853 763 aa6.42□□□□□ -1.38
LINC00393-202ENST00000452852 NKPD1Q17RQ9 610 aa6.42□□□□□ -1.38
LINC00393-202ENST00000452852 CWF19L2Q2TBE0 894 aaKnown RBP6.42□□□□□ -1.38
LINC00393-202ENST00000452852 SFRP5Q5T4F7 317 aa6.42□□□□□ -1.38
LINC00393-202ENST00000452852 SPACA3Q8IXA5 215 aa6.42□□□□□ -1.38
LINC00393-202ENST00000452852 ABI1Q8IZP0 508 aa6.42□□□□□ -1.38
LINC00393-202ENST00000452852 FAM13CQ8NE31 585 aa6.42□□□□□ -1.38
LINC00393-202ENST00000452852 HRASLS5Q96KN8 279 aa6.42□□□□□ -1.38
LINC00393-202ENST00000452852 SPATA32Q96LK8 384 aa6.42□□□□□ -1.38
LINC00393-202ENST00000452852 LRRC3Q9BY71 257 aa6.42□□□□□ -1.38
LINC00393-202ENST00000452852 KRTAP17-1Q9BYP8 105 aa6.42□□□□□ -1.38
LINC00393-202ENST00000452852 BRMS1Q9HCU9 246 aa6.42□□□□□ -1.38
LINC00393-202ENST00000452852 UBP1Q9NZI7 540 aa6.42□□□□□ -1.38
LINC00393-202ENST00000452852 VAV3Q9UKW4 847 aa6.42□□□□□ -1.38
LINC00393-202ENST00000452852 PCDHGB7Q9Y5F8 929 aa6.42□□□□□ -1.38
LINC00393-202ENST00000452852 CEP170Q5SW79 1584 aa6.41□□□□□ -1.38
LINC00393-202ENST00000452852 CHURC1-FNTBB4DL54 471 aa6.41□□□□□ -1.38
LINC00393-202ENST00000452852 CD8BP10966 210 aa6.41□□□□□ -1.38
LINC00393-202ENST00000452852 GTF2F1P35269 517 aaKnown RBP eCLIP6.41□□□□□ -1.38
LINC00393-202ENST00000452852 YARSP54577 528 aaKnown RBP6.41□□□□□ -1.38
LINC00393-202ENST00000452852 ZNF394Q53GI3 561 aa6.41□□□□□ -1.38
LINC00393-202ENST00000452852 USP48Q86UV5 1035 aa6.41□□□□□ -1.38
LINC00393-202ENST00000452852 SLC43A3Q8NBI5 491 aa6.41□□□□□ -1.38
LINC00393-202ENST00000452852 KLHL3Q9UH77 587 aa6.41□□□□□ -1.38
LINC00393-202ENST00000452852 SNX11Q9Y5W9 270 aa6.41□□□□□ -1.38
LINC00393-202ENST00000452852 FHAD1B1AJZ9 1412 aa6.41□□□□□ -1.38
LINC00393-202ENST00000452852 DNAJA2O60884 412 aa6.4□□□□□ -1.38
LINC00393-202ENST00000452852 CBX7O95931 251 aa6.4□□□□□ -1.38
LINC00393-202ENST00000452852 ZNF865P0CJ78 1059 aaPredicted RBP6.4□□□□□ -1.38
LINC00393-202ENST00000452852 ATP2B1P20020 1258 aa6.4□□□□□ -1.38
LINC00393-202ENST00000452852 DNAJA1P31689 397 aaKnown RBP6.4□□□□□ -1.38
LINC00393-202ENST00000452852 RACK1P63244 317 aaKnown RBP6.4□□□□□ -1.38
LINC00393-202ENST00000452852 SEZ6Q53EL9 994 aa6.4□□□□□ -1.38
LINC00393-202ENST00000452852 ZNF746Q6NUN9 644 aaPredicted RBP6.4□□□□□ -1.38
LINC00393-202ENST00000452852 GIMAP6Q6P9H5 292 aa6.4□□□□□ -1.38
LINC00393-202ENST00000452852 C22orf34Q6ZV56 151 aa6.4□□□□□ -1.38
LINC00393-202ENST00000452852 MFSD4AQ8N468 514 aa6.4□□□□□ -1.38
LINC00393-202ENST00000452852 DNAJB8Q8NHS0 232 aa6.4□□□□□ -1.38
LINC00393-202ENST00000452852 PPP1R13LQ8WUF5 828 aa6.4□□□□□ -1.38
LINC00393-202ENST00000452852 SPON2Q9BUD6 331 aa6.4□□□□□ -1.38
LINC00393-202ENST00000452852 CEP131Q9UPN4 1083 aa6.4□□□□□ -1.38
LINC00393-202ENST00000452852 PCDHB14Q9Y5E9 798 aa6.4□□□□□ -1.38
LINC00393-202ENST00000452852 FAM155AB1AL88 458 aaPredicted RBP6.39□□□□□ -1.39
LINC00393-202ENST00000452852 CDK11BP21127 795 aaKnown RBP6.39□□□□□ -1.39
LINC00393-202ENST00000452852 CYP7A1P22680 504 aa6.39□□□□□ -1.39
LINC00393-202ENST00000452852 APOBRQ0VD83 1088 aa6.39□□□□□ -1.39
LINC00393-202ENST00000452852 KIAA0825Q8IV33 1275 aa6.39□□□□□ -1.39
LINC00393-202ENST00000452852 SLFN12Q8IYM2 578 aa6.39□□□□□ -1.39
LINC00393-202ENST00000452852 AGBL5Q8NDL9 886 aa6.39□□□□□ -1.39
LINC00393-202ENST00000452852 CYB5D2Q8WUJ1 264 aa6.39□□□□□ -1.39
LINC00393-202ENST00000452852 EAF1Q96JC9 268 aaPredicted RBP6.39□□□□□ -1.39
LINC00393-202ENST00000452852 NT5C1AQ9BXI3 368 aa6.39□□□□□ -1.39
LINC00393-202ENST00000452852 LNPKQ9C0E8 428 aa6.39□□□□□ -1.39
LINC00393-202ENST00000452852 ADGRE2Q9UHX3 823 aa6.39□□□□□ -1.39
LINC00393-202ENST00000452852 DDX41Q9UJV9 622 aaKnown RBP6.39□□□□□ -1.39
LINC00393-202ENST00000452852 CDK11AQ9UQ88 783 aaPredicted RBP6.39□□□□□ -1.39
LINC00393-202ENST00000452852 NUP160Q12769 1436 aa6.39□□□□□ -1.39
LINC00393-202ENST00000452852 SHROOM2Q13796 1616 aa6.39□□□□□ -1.39
LINC00393-202ENST00000452852 ATE1O95260 518 aa6.38□□□□□ -1.39
LINC00393-202ENST00000452852 ETV3P41162 512 aa6.38□□□□□ -1.39
LINC00393-202ENST00000452852 CLCN7P51798 805 aa6.38□□□□□ -1.39
LINC00393-202ENST00000452852 CLCQ05315 142 aa6.38□□□□□ -1.39
LINC00393-202ENST00000452852 PLCL1Q15111 1095 aa6.38□□□□□ -1.39
LINC00393-202ENST00000452852 CDKAL1Q5VV42 579 aa6.38□□□□□ -1.39
LINC00393-202ENST00000452852 NKD1Q969G9 470 aa6.38□□□□□ -1.39
LINC00393-202ENST00000452852 HSPA12BQ96MM6 686 aa6.38□□□□□ -1.39
LINC00393-202ENST00000452852 INPP5FQ9Y2H2 1132 aa6.38□□□□□ -1.39
LINC00393-202ENST00000452852 CAPN6Q9Y6Q1 641 aa6.38□□□□□ -1.39
LINC00393-202ENST00000452852 ERCC6L2Q5T890 1561 aa6.37□□□□□ -1.39
LINC00393-202ENST00000452852 PITPNM2Q9BZ72 1349 aa6.37□□□□□ -1.39
LINC00393-202ENST00000452852 SLC22A31A6NKX4 558 aa6.37□□□□□ -1.39
LINC00393-202ENST00000452852 C8AP07357 584 aa6.37□□□□□ -1.39
LINC00393-202ENST00000452852 MCM4P33991 863 aa6.37□□□□□ -1.39
LINC00393-202ENST00000452852 KIR3DL1P43629 444 aa6.37□□□□□ -1.39
LINC00393-202ENST00000452852 GNL2Q13823 731 aaKnown RBP6.37□□□□□ -1.39
LINC00393-202ENST00000452852 GK5Q6ZS86 529 aa6.37□□□□□ -1.39
LINC00393-202ENST00000452852 SLITRK4Q8IW52 837 aa6.37□□□□□ -1.39
LINC00393-202ENST00000452852 PHACTR4Q8IZ21 702 aa6.37□□□□□ -1.39
LINC00393-202ENST00000452852 ZNF654Q8IZM8 581 aa6.37□□□□□ -1.39
LINC00393-202ENST00000452852 BAHD1Q8TBE0 780 aaPredicted RBP6.37□□□□□ -1.39
LINC00393-202ENST00000452852 ASB11Q8WXH4 323 aa6.37□□□□□ -1.39
LINC00393-202ENST00000452852 COX4I2Q96KJ9 171 aa6.37□□□□□ -1.39
LINC00393-202ENST00000452852 EHMT1Q9H9B1 1298 aa6.37□□□□□ -1.39
LINC00393-202ENST00000452852 SEMA3GQ9NS98 782 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms