RNA–Protein interactions for RNA: ENST00000449864.5

HDLBP-223, Transcript of high density lipoprotein binding protein, human

TSL 5

Gene HDLBP, Length 529 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-223	ENST00000449864	KANSL2	Q9H9L4	492 aa		18.86	■□□□□ 0.61
HDLBP-223	ENST00000449864	CWC22	Q9HCG8	908 aa	Known RBP	18.86	■□□□□ 0.61
HDLBP-223	ENST00000449864	SLC3A2	P08195	630 aa	Known RBP	18.85	■□□□□ 0.61
HDLBP-223	ENST00000449864	ELN	P15502	786 aa		18.85	■□□□□ 0.61
HDLBP-223	ENST00000449864	RASA1	P20936	1047 aa		18.85	■□□□□ 0.61
HDLBP-223	ENST00000449864	IRF5	Q13568	498 aa		18.85	■□□□□ 0.61
HDLBP-223	ENST00000449864	LPAR1	Q92633	364 aa		18.85	■□□□□ 0.61
HDLBP-223	ENST00000449864	RBPJL	Q9UBG7	517 aa		18.85	■□□□□ 0.61
HDLBP-223	ENST00000449864	TMX2	Q9Y320	296 aa		18.85	■□□□□ 0.61
HDLBP-223	ENST00000449864	EEF2	P13639	858 aa	Known RBP	18.84	■□□□□ 0.61
HDLBP-223	ENST00000449864	MAPK4	P31152	587 aa		18.84	■□□□□ 0.61
HDLBP-223	ENST00000449864	SPICE1	Q8N0Z3	855 aa		18.84	■□□□□ 0.61
HDLBP-223	ENST00000449864	VCPKMT	Q9H867	229 aa		18.84	■□□□□ 0.61
HDLBP-223	ENST00000449864	ZNF236	Q9UL36	1845 aa		18.84	■□□□□ 0.61
HDLBP-223	ENST00000449864	ZNFX1	Q9P2E3	1918 aa	Known RBP	18.83	■□□□□ 0.6
HDLBP-223	ENST00000449864	RAD21	O60216	631 aa		18.83	■□□□□ 0.6
HDLBP-223	ENST00000449864	EN2	P19622	333 aa	Predicted RBP	18.83	■□□□□ 0.6
HDLBP-223	ENST00000449864	CCNA1	P78396	465 aa		18.83	■□□□□ 0.6
HDLBP-223	ENST00000449864	PLEKHM2	Q8IWE5	1019 aa		18.83	■□□□□ 0.6
HDLBP-223	ENST00000449864	PXYLP1	Q8TE99	480 aa		18.83	■□□□□ 0.6
HDLBP-223	ENST00000449864	GOPC	Q9HD26	462 aa		18.83	■□□□□ 0.6
HDLBP-223	ENST00000449864	HELLS	Q9NRZ9	838 aa		18.83	■□□□□ 0.6
HDLBP-223	ENST00000449864	RABGAP1	Q9Y3P9	1069 aa		18.83	■□□□□ 0.6
HDLBP-223	ENST00000449864	SPDYE16	A6NNV3	312 aa	Predicted RBP	18.82	■□□□□ 0.6
HDLBP-223	ENST00000449864	PRDM1	O75626	825 aa		18.82	■□□□□ 0.6
HDLBP-223	ENST00000449864	INHA	P05111	366 aa		18.82	■□□□□ 0.6
HDLBP-223	ENST00000449864	CCL5	P13501	91 aa		18.82	■□□□□ 0.6
HDLBP-223	ENST00000449864	PDE4B	Q07343	736 aa		18.82	■□□□□ 0.6
HDLBP-223	ENST00000449864	PPARA	Q07869	468 aa		18.82	■□□□□ 0.6
HDLBP-223	ENST00000449864	COG2	Q14746	738 aa		18.82	■□□□□ 0.6
HDLBP-223	ENST00000449864	MTFR1	Q15390	333 aa		18.82	■□□□□ 0.6
HDLBP-223	ENST00000449864	WDR78	Q5VTH9	848 aa		18.82	■□□□□ 0.6
HDLBP-223	ENST00000449864	TICAM2	Q86XR7	235 aa		18.82	■□□□□ 0.6
HDLBP-223	ENST00000449864	SIAH1	Q8IUQ4	282 aa		18.82	■□□□□ 0.6
HDLBP-223	ENST00000449864	ZNF444	Q8N0Y2	327 aa	Predicted RBP	18.82	■□□□□ 0.6
HDLBP-223	ENST00000449864	SOCS4	Q8WXH5	440 aa		18.82	■□□□□ 0.6
HDLBP-223	ENST00000449864	FAM227B	Q96M60	508 aa		18.82	■□□□□ 0.6
HDLBP-223	ENST00000449864	OSBPL3	Q9H4L5	887 aa		18.82	■□□□□ 0.6
HDLBP-223	ENST00000449864	PLXNA1	Q9UIW2	1896 aa		18.82	■□□□□ 0.6
HDLBP-223	ENST00000449864	FRMPD3	Q5JV73	1810 aa		18.81	■□□□□ 0.6
HDLBP-223	ENST00000449864		A0A0D9SFI3	127 aa		18.81	■□□□□ 0.6
HDLBP-223	ENST00000449864	WDR46	O15213	610 aa	Known RBP	18.81	■□□□□ 0.6
HDLBP-223	ENST00000449864	FLOT1	O75955	427 aa		18.81	■□□□□ 0.6
HDLBP-223	ENST00000449864	NMI	Q13287	307 aa	Predicted RBP	18.81	■□□□□ 0.6
HDLBP-223	ENST00000449864		Q3C1V9	767 aa		18.81	■□□□□ 0.6
HDLBP-223	ENST00000449864	MCMDC2	Q4G0Z9	681 aa		18.81	■□□□□ 0.6
HDLBP-223	ENST00000449864	KIAA1755	Q5JYT7	1200 aa		18.81	■□□□□ 0.6
HDLBP-223	ENST00000449864	SAMD1	Q6SPF0	538 aa	Predicted RBP	18.81	■□□□□ 0.6
HDLBP-223	ENST00000449864	LBX2	Q6XYB7	198 aa		18.81	■□□□□ 0.6
HDLBP-223	ENST00000449864	NUDT12	Q9BQG2	462 aa		18.81	■□□□□ 0.6
HDLBP-223	ENST00000449864	RNF208	Q9H0X6	261 aa		18.81	■□□□□ 0.6
HDLBP-223	ENST00000449864	PORCN	Q9H237	461 aa		18.81	■□□□□ 0.6
HDLBP-223	ENST00000449864	CNMD	O75829	334 aa		18.8	■□□□□ 0.6
HDLBP-223	ENST00000449864	POTEE	Q6S8J3	1075 aa		18.8	■□□□□ 0.6
HDLBP-223	ENST00000449864	GPR142	Q7Z601	462 aa		18.8	■□□□□ 0.6
HDLBP-223	ENST00000449864	PLEKHH3	Q7Z736	793 aa		18.8	■□□□□ 0.6
HDLBP-223	ENST00000449864	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	18.8	■□□□□ 0.6
HDLBP-223	ENST00000449864	HOXC10	Q9NYD6	342 aa		18.8	■□□□□ 0.6
HDLBP-223	ENST00000449864	BTBD7	Q9P203	1132 aa		18.8	■□□□□ 0.6
HDLBP-223	ENST00000449864	HMGCR	P04035	888 aa		18.79	■□□□□ 0.6
HDLBP-223	ENST00000449864	TSPY3	P0CV98	308 aa		18.79	■□□□□ 0.6
HDLBP-223	ENST00000449864	TSPY8	P0CW00	308 aa		18.79	■□□□□ 0.6
HDLBP-223	ENST00000449864	VPS53	Q5VIR6	699 aa		18.79	■□□□□ 0.6
HDLBP-223	ENST00000449864	NKX2-3	Q8TAU0	364 aa		18.79	■□□□□ 0.6
HDLBP-223	ENST00000449864	UNC93B1	Q9H1C4	597 aa		18.79	■□□□□ 0.6
HDLBP-223	ENST00000449864	GJD2	Q9UKL4	321 aa		18.79	■□□□□ 0.6
HDLBP-223	ENST00000449864	PLIN4	Q96Q06	1357 aa		18.79	■□□□□ 0.6
HDLBP-223	ENST00000449864	CCDC171	Q6TFL3	1326 aa		18.78	■□□□□ 0.6
HDLBP-223	ENST00000449864	FOXP2	O15409	715 aa		18.78	■□□□□ 0.6
HDLBP-223	ENST00000449864	CYP2B6	P20813	491 aa		18.78	■□□□□ 0.6
HDLBP-223	ENST00000449864	MFAP1	P55081	439 aa	Known RBP	18.78	■□□□□ 0.6
HDLBP-223	ENST00000449864	MB21D1	Q8N884	522 aa		18.78	■□□□□ 0.6
HDLBP-223	ENST00000449864	DIAPH3	Q9NSV4	1193 aa		18.78	■□□□□ 0.6
HDLBP-223	ENST00000449864	NYAP2	Q9P242	653 aa		18.78	■□□□□ 0.6
HDLBP-223	ENST00000449864	IVNS1ABP	Q9Y6Y0	642 aa		18.78	■□□□□ 0.6
HDLBP-223	ENST00000449864	GJB1	P08034	283 aa		18.77	■□□□□ 0.6
HDLBP-223	ENST00000449864	SDS	P20132	328 aa		18.77	■□□□□ 0.6
HDLBP-223	ENST00000449864	DSG3	P32926	999 aa		18.77	■□□□□ 0.6
HDLBP-223	ENST00000449864	RGS2	P41220	211 aa		18.77	■□□□□ 0.6
HDLBP-223	ENST00000449864	CTDSPL2	Q05D32	466 aa		18.77	■□□□□ 0.6
HDLBP-223	ENST00000449864	PLS1	Q14651	629 aa		18.77	■□□□□ 0.6
HDLBP-223	ENST00000449864	FAM83B	Q5T0W9	1011 aa		18.77	■□□□□ 0.6
HDLBP-223	ENST00000449864	ATG4C	Q96DT6	458 aa		18.77	■□□□□ 0.6
HDLBP-223	ENST00000449864	CEP95	Q96GE4	821 aa		18.77	■□□□□ 0.6
HDLBP-223	ENST00000449864	CLIP2	Q9UDT6	1046 aa		18.77	■□□□□ 0.6
HDLBP-223	ENST00000449864	IGKV6D-41	A0A0C4DH26	115 aa		18.76	■□□□□ 0.59
HDLBP-223	ENST00000449864	HIP1	O00291	1037 aa		18.76	■□□□□ 0.59
HDLBP-223	ENST00000449864	ZKSCAN1	P17029	563 aa	Predicted RBP	18.76	■□□□□ 0.59
HDLBP-223	ENST00000449864	TFAP4	Q01664	338 aa		18.76	■□□□□ 0.59
HDLBP-223	ENST00000449864	FAM47A	Q5JRC9	791 aa		18.76	■□□□□ 0.59
HDLBP-223	ENST00000449864	ZNF589	Q86UQ0	364 aa	Predicted RBP	18.76	■□□□□ 0.59
HDLBP-223	ENST00000449864	NEDD1	Q8NHV4	660 aa		18.76	■□□□□ 0.59
HDLBP-223	ENST00000449864	TRIB2	Q92519	343 aa		18.76	■□□□□ 0.59
HDLBP-223	ENST00000449864	APBA2	Q99767	749 aa		18.76	■□□□□ 0.59
HDLBP-223	ENST00000449864	BRCA2	P51587	3418 aa		18.75	■□□□□ 0.59
HDLBP-223	ENST00000449864	TSPY2	A6NKD2	308 aa		18.75	■□□□□ 0.59
HDLBP-223	ENST00000449864	TTLL1	O95922	423 aa		18.75	■□□□□ 0.59
HDLBP-223	ENST00000449864	HSPD1	P10809	573 aa	Known RBP	18.75	■□□□□ 0.59
HDLBP-223	ENST00000449864	XRCC5	P13010	732 aa	Known RBP	18.75	■□□□□ 0.59
HDLBP-223	ENST00000449864	GJA8	P48165	433 aa		18.75	■□□□□ 0.59

Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms