RNA–Protein interactions for RNA: ENST00000449709.1

HMGB3P8-201, Transcript of high mobility group box 3 pseudogene 8, humanhuman

BASIC

Gene HMGB3P8, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P8-201ENST00000449709 MARK1Q9P0L2 795 aa4.26□□□□□ -1.73
HMGB3P8-201ENST00000449709 MKL2Q9ULH7 1088 aa4.26□□□□□ -1.73
HMGB3P8-201ENST00000449709 PCDHB5Q9Y5E4 795 aa4.26□□□□□ -1.73
HMGB3P8-201ENST00000449709 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.26□□□□□ -1.73
HMGB3P8-201ENST00000449709 NAIPQ13075 1403 aa4.26□□□□□ -1.73
HMGB3P8-201ENST00000449709 AATKQ6ZMQ8 1374 aa4.26□□□□□ -1.73
HMGB3P8-201ENST00000449709 CUX1P39880 1505 aa4.26□□□□□ -1.73
HMGB3P8-201ENST00000449709 ABCC2Q92887 1545 aa4.26□□□□□ -1.73
HMGB3P8-201ENST00000449709 DISP1Q96F81 1524 aa4.26□□□□□ -1.73
HMGB3P8-201ENST00000449709 PTPRCP08575 1304 aa4.25□□□□□ -1.73
HMGB3P8-201ENST00000449709 IL16Q14005 1332 aa4.25□□□□□ -1.73
HMGB3P8-201ENST00000449709 KIF14Q15058 1648 aa4.25□□□□□ -1.73
HMGB3P8-201ENST00000449709 LOC102724428A0A0B4J2F2 783 aa4.25□□□□□ -1.73
HMGB3P8-201ENST00000449709 KRTAP9-6A0A140TA67 174 aa4.25□□□□□ -1.73
HMGB3P8-201ENST00000449709 GOLGA6L6A8MZA4 724 aa4.25□□□□□ -1.73
HMGB3P8-201ENST00000449709 ZBTB42B2RXF5 422 aa4.25□□□□□ -1.73
HMGB3P8-201ENST00000449709 PDE2AO00408 941 aaPredicted RBP4.25□□□□□ -1.73
HMGB3P8-201ENST00000449709 TLR3O15455 904 aaKnown RBP4.25□□□□□ -1.73
HMGB3P8-201ENST00000449709 CILPO75339 1184 aa4.25□□□□□ -1.73
HMGB3P8-201ENST00000449709 EPXP11678 715 aa4.25□□□□□ -1.73
HMGB3P8-201ENST00000449709 IBSPP21815 317 aaPredicted RBP4.25□□□□□ -1.73
HMGB3P8-201ENST00000449709 BMP6P22004 513 aa4.25□□□□□ -1.73
HMGB3P8-201ENST00000449709 TNNT3P45378 269 aaPredicted RBP4.25□□□□□ -1.73
HMGB3P8-201ENST00000449709 ZNF165P49910 485 aa4.25□□□□□ -1.73
HMGB3P8-201ENST00000449709 SIK1P57059 783 aa4.25□□□□□ -1.73
HMGB3P8-201ENST00000449709 CHMP4BP1P59074 171 aa4.25□□□□□ -1.73
HMGB3P8-201ENST00000449709 RBM6P78332 1123 aaKnown RBP4.25□□□□□ -1.73
HMGB3P8-201ENST00000449709 GRIK3Q13003 919 aa4.25□□□□□ -1.73
HMGB3P8-201ENST00000449709 MPP2Q14168 576 aa4.25□□□□□ -1.73
HMGB3P8-201ENST00000449709 PDIA5Q14554 519 aa4.25□□□□□ -1.73
HMGB3P8-201ENST00000449709 DDR2Q16832 855 aa4.25□□□□□ -1.73
HMGB3P8-201ENST00000449709 AMOTQ4VCS5 1084 aa4.25□□□□□ -1.73
HMGB3P8-201ENST00000449709 RASIP1Q5U651 963 aa4.25□□□□□ -1.73
HMGB3P8-201ENST00000449709 SLCO4C1Q6ZQN7 724 aa4.25□□□□□ -1.73
HMGB3P8-201ENST00000449709 MMS22LQ6ZRQ5 1243 aa4.25□□□□□ -1.73
HMGB3P8-201ENST00000449709 FILIP1Q7Z7B0 1213 aa4.25□□□□□ -1.73
HMGB3P8-201ENST00000449709 LSM14AQ8ND56 463 aaKnown RBP4.25□□□□□ -1.73
HMGB3P8-201ENST00000449709 ZNF397Q8NF99 534 aaPredicted RBP4.25□□□□□ -1.73
HMGB3P8-201ENST00000449709 ZCRB1Q8TBF4 217 aaKnown RBP4.25□□□□□ -1.73
HMGB3P8-201ENST00000449709 TRPM4Q8TD43 1214 aa4.25□□□□□ -1.73
HMGB3P8-201ENST00000449709 JARID2Q92833 1246 aaPredicted RBP4.25□□□□□ -1.73
HMGB3P8-201ENST00000449709 BHMTQ93088 406 aa4.25□□□□□ -1.73
HMGB3P8-201ENST00000449709 PLD4Q96BZ4 506 aa4.25□□□□□ -1.73
HMGB3P8-201ENST00000449709 NSUN5Q96P11 429 aaKnown RBP4.25□□□□□ -1.73
HMGB3P8-201ENST00000449709 DNAJC7Q99615 494 aa4.25□□□□□ -1.73
HMGB3P8-201ENST00000449709 PBX4Q9BYU1 374 aa4.25□□□□□ -1.73
HMGB3P8-201ENST00000449709 RBSNQ9H1K0 784 aa4.25□□□□□ -1.73
HMGB3P8-201ENST00000449709 TMEM39AQ9NV64 488 aa4.25□□□□□ -1.73
HMGB3P8-201ENST00000449709 ETAA1Q9NY74 926 aa4.25□□□□□ -1.73
HMGB3P8-201ENST00000449709 COL4A3BPQ9Y5P4 624 aa4.25□□□□□ -1.73
HMGB3P8-201ENST00000449709 DDX49Q9Y6V7 483 aaKnown RBP4.25□□□□□ -1.73
HMGB3P8-201ENST00000449709 CAMSAP2Q08AD1 1489 aa4.24□□□□□ -1.73
HMGB3P8-201ENST00000449709 SYNRGQ9UMZ2 1314 aa4.24□□□□□ -1.73
HMGB3P8-201ENST00000449709 KIF27Q86VH2 1401 aa4.24□□□□□ -1.73
HMGB3P8-201ENST00000449709 ANKRD50Q9ULJ7 1429 aa4.24□□□□□ -1.73
HMGB3P8-201ENST00000449709 CCDC85CA6NKD9 419 aa4.24□□□□□ -1.73
HMGB3P8-201ENST00000449709 NEURL1BA8MQ27 555 aa4.24□□□□□ -1.73
HMGB3P8-201ENST00000449709 SMTNL1A8MU46 457 aa4.24□□□□□ -1.73
HMGB3P8-201ENST00000449709 J3QW42 95 aa4.24□□□□□ -1.73
HMGB3P8-201ENST00000449709 MPHOSPH10O00566 681 aaKnown RBP4.24□□□□□ -1.73
HMGB3P8-201ENST00000449709 MARCH6O60337 910 aa4.24□□□□□ -1.73
HMGB3P8-201ENST00000449709 H2AFXP16104 143 aaPredicted RBP4.24□□□□□ -1.73
HMGB3P8-201ENST00000449709 CD33P20138 364 aa4.24□□□□□ -1.73
HMGB3P8-201ENST00000449709 SCP2P22307 547 aa4.24□□□□□ -1.73
HMGB3P8-201ENST00000449709 CCT2P78371 535 aaKnown RBP4.24□□□□□ -1.73
HMGB3P8-201ENST00000449709 GPLD1P80108 840 aa4.24□□□□□ -1.73
HMGB3P8-201ENST00000449709 BIRC2Q13490 618 aa4.24□□□□□ -1.73
HMGB3P8-201ENST00000449709 RASGRF1Q13972 1273 aa4.24□□□□□ -1.73
HMGB3P8-201ENST00000449709 CWF19L2Q2TBE0 894 aaKnown RBP4.24□□□□□ -1.73
HMGB3P8-201ENST00000449709 LRSAM1Q6UWE0 723 aa4.24□□□□□ -1.73
HMGB3P8-201ENST00000449709 SYT10Q6XYQ8 523 aa4.24□□□□□ -1.73
HMGB3P8-201ENST00000449709 RAB44Q7Z6P3 723 aaPredicted RBP4.24□□□□□ -1.73
HMGB3P8-201ENST00000449709 SKAP1Q86WV1 359 aa4.24□□□□□ -1.73
HMGB3P8-201ENST00000449709 REXO1Q8N1G1 1221 aaKnown RBP4.24□□□□□ -1.73
HMGB3P8-201ENST00000449709 KLHL23Q8NBE8 558 aa4.24□□□□□ -1.73
HMGB3P8-201ENST00000449709 RBBP8NLQ8NC74 664 aaPredicted RBP4.24□□□□□ -1.73
HMGB3P8-201ENST00000449709 FBXO18Q8NFZ0 1043 aa4.24□□□□□ -1.73
HMGB3P8-201ENST00000449709 OR6P1Q8NGX9 317 aa4.24□□□□□ -1.73
HMGB3P8-201ENST00000449709 KIAA1524Q8TCG1 905 aa4.24□□□□□ -1.73
HMGB3P8-201ENST00000449709 ASAP3Q8TDY4 903 aa4.24□□□□□ -1.73
HMGB3P8-201ENST00000449709 MICAL1Q8TDZ2 1067 aa4.24□□□□□ -1.73
HMGB3P8-201ENST00000449709 SH3TC2Q8TF17 1288 aa4.24□□□□□ -1.73
HMGB3P8-201ENST00000449709 BTBD6Q96KE9 485 aa4.24□□□□□ -1.73
HMGB3P8-201ENST00000449709 AGAP3Q96P47 875 aa4.24□□□□□ -1.73
HMGB3P8-201ENST00000449709 FERD3LQ96RJ6 166 aa4.24□□□□□ -1.73
HMGB3P8-201ENST00000449709 MUC3BQ9H195 1237 aa4.24□□□□□ -1.73
HMGB3P8-201ENST00000449709 MIR1-1HGQ9H1L0 117 aa4.24□□□□□ -1.73
HMGB3P8-201ENST00000449709 ZSCAN16Q9H4T2 348 aaPredicted RBP4.24□□□□□ -1.73
HMGB3P8-201ENST00000449709 SPC25Q9HBM1 224 aa4.24□□□□□ -1.73
HMGB3P8-201ENST00000449709 PCDH12Q9NPG4 1184 aa4.24□□□□□ -1.73
HMGB3P8-201ENST00000449709 FANCLQ9NW38 375 aa4.24□□□□□ -1.73
HMGB3P8-201ENST00000449709 ACTR10Q9NZ32 417 aa4.24□□□□□ -1.73
HMGB3P8-201ENST00000449709 GPN3Q9UHW5 284 aaPredicted RBP4.24□□□□□ -1.73
HMGB3P8-201ENST00000449709 CYP8B1Q9UNU6 501 aa4.24□□□□□ -1.73
HMGB3P8-201ENST00000449709 PRKAB1Q9Y478 270 aa4.24□□□□□ -1.73
HMGB3P8-201ENST00000449709 SAMM50Q9Y512 469 aa4.24□□□□□ -1.73
HMGB3P8-201ENST00000449709 V9GYY5 206 aaPredicted RBP4.24□□□□□ -1.73
HMGB3P8-201ENST00000449709 ANKRD36BQ8N2N9 1353 aa4.24□□□□□ -1.73
HMGB3P8-201ENST00000449709 KIF7Q2M1P5 1343 aa4.23□□□□□ -1.73
HMGB3P8-201ENST00000449709 ESYT3A0FGR9 886 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms