RNA–Protein interactions for RNA: ENST00000441725.1

CDC42BPA-207, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-207ENST00000441725 WNT8BQ93098 351 aa5.4□□□□□ -1.54
CDC42BPA-207ENST00000441725 TMEM87BQ96K49 555 aa5.4□□□□□ -1.54
CDC42BPA-207ENST00000441725 COL25A1Q9BXS0 654 aaPredicted RBP5.4□□□□□ -1.54
CDC42BPA-207ENST00000441725 USP26Q9BXU7 913 aa5.4□□□□□ -1.54
CDC42BPA-207ENST00000441725 TRIM39Q9HCM9 518 aa5.4□□□□□ -1.54
CDC42BPA-207ENST00000441725 JPH1Q9HDC5 661 aaPredicted RBP5.4□□□□□ -1.54
CDC42BPA-207ENST00000441725 OSGEPQ9NPF4 335 aa5.4□□□□□ -1.54
CDC42BPA-207ENST00000441725 SFMBT1Q9UHJ3 866 aa5.4□□□□□ -1.54
CDC42BPA-207ENST00000441725 ELOA3CA0A087WX78 387 aaPredicted RBP5.4□□□□□ -1.55
CDC42BPA-207ENST00000441725 LOC100289279A0A1B0GTE1 492 aa5.4□□□□□ -1.55
CDC42BPA-207ENST00000441725 ELOA3DA6NLF2 546 aaPredicted RBP5.4□□□□□ -1.55
CDC42BPA-207ENST00000441725 PRODHO43272 600 aa5.4□□□□□ -1.55
CDC42BPA-207ENST00000441725 CAPNS1P04632 268 aa5.4□□□□□ -1.55
CDC42BPA-207ENST00000441725 C6orf222P0C671 652 aaPredicted RBP5.4□□□□□ -1.55
CDC42BPA-207ENST00000441725 FGFR1P11362 822 aa5.4□□□□□ -1.55
CDC42BPA-207ENST00000441725 MX2P20592 715 aa5.4□□□□□ -1.55
CDC42BPA-207ENST00000441725 NTF4P34130 210 aa5.4□□□□□ -1.55
CDC42BPA-207ENST00000441725 YARSP54577 528 aaKnown RBP5.4□□□□□ -1.55
CDC42BPA-207ENST00000441725 SUMO1P63165 101 aaKnown RBP5.4□□□□□ -1.55
CDC42BPA-207ENST00000441725 ZNF460Q14592 562 aa5.4□□□□□ -1.55
CDC42BPA-207ENST00000441725 PCBP1Q15365 356 aaKnown RBP eCLIP5.4□□□□□ -1.55
CDC42BPA-207ENST00000441725 ELOA3BQ3SY89 546 aa5.4□□□□□ -1.55
CDC42BPA-207ENST00000441725 PKN3Q6P5Z2 889 aa5.4□□□□□ -1.55
CDC42BPA-207ENST00000441725 PPM1KQ8N3J5 372 aa5.4□□□□□ -1.55
CDC42BPA-207ENST00000441725 ELOA3Q8NG57 546 aa5.4□□□□□ -1.55
CDC42BPA-207ENST00000441725 OSBP2Q969R2 916 aa5.4□□□□□ -1.55
CDC42BPA-207ENST00000441725 SMAD5Q99717 465 aaKnown RBP5.4□□□□□ -1.55
CDC42BPA-207ENST00000441725 KLHL25Q9H0H3 589 aa5.4□□□□□ -1.55
CDC42BPA-207ENST00000441725 SLC52A2Q9HAB3 445 aa5.4□□□□□ -1.55
CDC42BPA-207ENST00000441725 FBRSQ9HAH7 460 aa5.4□□□□□ -1.55
CDC42BPA-207ENST00000441725 PHLDB1Q86UU1 1377 aa5.4□□□□□ -1.55
CDC42BPA-207ENST00000441725 EIF4EBP3O60516 100 aaPredicted RBP5.39□□□□□ -1.55
CDC42BPA-207ENST00000441725 AOC2O75106 756 aa5.39□□□□□ -1.55
CDC42BPA-207ENST00000441725 NAT2P11245 290 aa5.39□□□□□ -1.55
CDC42BPA-207ENST00000441725 NKG7Q16617 165 aa5.39□□□□□ -1.55
CDC42BPA-207ENST00000441725 TRIM61Q5EBN2 209 aa5.39□□□□□ -1.55
CDC42BPA-207ENST00000441725 RNFT1Q5M7Z0 435 aa5.39□□□□□ -1.55
CDC42BPA-207ENST00000441725 ZBTB37Q5TC79 503 aa5.39□□□□□ -1.55
CDC42BPA-207ENST00000441725 NSMFQ6X4W1 530 aa5.39□□□□□ -1.55
CDC42BPA-207ENST00000441725 BRAPQ7Z569 592 aa5.39□□□□□ -1.55
CDC42BPA-207ENST00000441725 FGD2Q7Z6J4 655 aa5.39□□□□□ -1.55
CDC42BPA-207ENST00000441725 WDR66Q8TBY9 1149 aa5.39□□□□□ -1.55
CDC42BPA-207ENST00000441725 RELTQ969Z4 430 aa5.39□□□□□ -1.55
CDC42BPA-207ENST00000441725 SPOCK3Q9BQ16 436 aa5.39□□□□□ -1.55
CDC42BPA-207ENST00000441725 CCDC8Q9H0W5 538 aaPredicted RBP5.39□□□□□ -1.55
CDC42BPA-207ENST00000441725 ZIM2Q9NZV7 527 aa5.39□□□□□ -1.55
CDC42BPA-207ENST00000441725 STK17AQ9UEE5 414 aa5.39□□□□□ -1.55
CDC42BPA-207ENST00000441725 STARD13Q9Y3M8 1113 aa5.39□□□□□ -1.55
CDC42BPA-207ENST00000441725 KIF3BO15066 747 aa5.39□□□□□ -1.55
CDC42BPA-207ENST00000441725 AKAP10O43572 662 aa5.39□□□□□ -1.55
CDC42BPA-207ENST00000441725 AFF1P51825 1210 aaKnown RBP5.39□□□□□ -1.55
CDC42BPA-207ENST00000441725 NEK2P51955 445 aa5.39□□□□□ -1.55
CDC42BPA-207ENST00000441725 ERVK-24P63145 666 aa5.39□□□□□ -1.55
CDC42BPA-207ENST00000441725 ITKQ08881 620 aa5.39□□□□□ -1.55
CDC42BPA-207ENST00000441725 BIRC2Q13490 618 aa5.39□□□□□ -1.55
CDC42BPA-207ENST00000441725 MAP7Q14244 749 aa5.39□□□□□ -1.55
CDC42BPA-207ENST00000441725 SEPT7Q16181 437 aaKnown RBP5.39□□□□□ -1.55
CDC42BPA-207ENST00000441725 MRPL41Q8IXM3 137 aaKnown RBP5.39□□□□□ -1.55
CDC42BPA-207ENST00000441725 SMC5Q8IY18 1101 aa5.39□□□□□ -1.55
CDC42BPA-207ENST00000441725 BAHD1Q8TBE0 780 aaPredicted RBP5.39□□□□□ -1.55
CDC42BPA-207ENST00000441725 MTMR8Q96EF0 704 aa5.39□□□□□ -1.55
CDC42BPA-207ENST00000441725 ZNF512BQ96KM6 892 aaPredicted RBP5.39□□□□□ -1.55
CDC42BPA-207ENST00000441725 RPS6KC1Q96S38 1066 aa5.39□□□□□ -1.55
CDC42BPA-207ENST00000441725 PICK1Q9NRD5 415 aa5.39□□□□□ -1.55
CDC42BPA-207ENST00000441725 SLC5A4Q9NY91 659 aa5.39□□□□□ -1.55
CDC42BPA-207ENST00000441725 NDOR1Q9UHB4 597 aa5.39□□□□□ -1.55
CDC42BPA-207ENST00000441725 TNPO3Q9Y5L0 923 aaKnown RBP5.39□□□□□ -1.55
CDC42BPA-207ENST00000441725 DDX3YO15523 660 aaKnown RBP5.38□□□□□ -1.55
CDC42BPA-207ENST00000441725 ADAM11O75078 769 aa5.38□□□□□ -1.55
CDC42BPA-207ENST00000441725 CLEC3AO75596 197 aa5.38□□□□□ -1.55
CDC42BPA-207ENST00000441725 ALBP02768 609 aa5.38□□□□□ -1.55
CDC42BPA-207ENST00000441725 SLFN14P0C7P3 912 aa5.38□□□□□ -1.55
CDC42BPA-207ENST00000441725 CPEP16870 476 aa5.38□□□□□ -1.55
CDC42BPA-207ENST00000441725 HNRNPUQ00839 825 aaKnown RBP eCLIP5.38□□□□□ -1.55
CDC42BPA-207ENST00000441725 CCSAPQ6IQ19 270 aaPredicted RBP5.38□□□□□ -1.55
CDC42BPA-207ENST00000441725 C20orf204Q6ZNR8 217 aa5.38□□□□□ -1.55
CDC42BPA-207ENST00000441725 C14orf80Q86SX3 495 aa5.38□□□□□ -1.55
CDC42BPA-207ENST00000441725 GALNT11Q8NCW6 608 aa5.38□□□□□ -1.55
CDC42BPA-207ENST00000441725 CCDC74BQ96LY2 380 aa5.38□□□□□ -1.55
CDC42BPA-207ENST00000441725 TRIM8Q9BZR9 551 aa5.38□□□□□ -1.55
CDC42BPA-207ENST00000441725 MTFR1LQ9H019 292 aa5.38□□□□□ -1.55
CDC42BPA-207ENST00000441725 FANCGO15287 622 aa5.38□□□□□ -1.55
CDC42BPA-207ENST00000441725 POU3F2P20265 443 aaPredicted RBP5.38□□□□□ -1.55
CDC42BPA-207ENST00000441725 GBP1P32455 592 aa5.38□□□□□ -1.55
CDC42BPA-207ENST00000441725 NEK4P51957 841 aa5.38□□□□□ -1.55
CDC42BPA-207ENST00000441725 GAS6Q14393 721 aa5.38□□□□□ -1.55
CDC42BPA-207ENST00000441725 STAT4Q14765 748 aa5.38□□□□□ -1.55
CDC42BPA-207ENST00000441725 SLC6A19Q695T7 634 aa5.38□□□□□ -1.55
CDC42BPA-207ENST00000441725 NECAB2Q7Z6G3 386 aa5.38□□□□□ -1.55
CDC42BPA-207ENST00000441725 ADAT2Q7Z6V5 191 aaKnown RBP5.38□□□□□ -1.55
CDC42BPA-207ENST00000441725 CCDC144CPQ8IYA2 1237 aa5.38□□□□□ -1.55
CDC42BPA-207ENST00000441725 BVESQ8NE79 360 aa5.38□□□□□ -1.55
CDC42BPA-207ENST00000441725 GGA1Q9UJY5 639 aa5.38□□□□□ -1.55
CDC42BPA-207ENST00000441725 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.37□□□□□ -1.55
CDC42BPA-207ENST00000441725 GPR39O43194 453 aa5.37□□□□□ -1.55
CDC42BPA-207ENST00000441725 KPNA6O60684 536 aa5.37□□□□□ -1.55
CDC42BPA-207ENST00000441725 ZEB1P37275 1124 aaPredicted RBP5.37□□□□□ -1.55
CDC42BPA-207ENST00000441725 UBE4AQ14139 1066 aa5.37□□□□□ -1.55
CDC42BPA-207ENST00000441725 SUZ12Q15022 739 aaKnown RBP5.37□□□□□ -1.55
CDC42BPA-207ENST00000441725 C8orf86Q6ZUL3 223 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms