RNA–Protein interactions for RNA: ENST00000441350.2

VPS13B-204, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 1,626 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-204ENST00000441350 OTOFQ9HC10 1997 aa24.61■■□□□ 1.53
VPS13B-204ENST00000441350 A0A1W2PRG0 241 aa24.61■■□□□ 1.53
VPS13B-204ENST00000441350 DHX16O60231 1041 aaKnown RBP24.61■■□□□ 1.53
VPS13B-204ENST00000441350 ADD1P35611 737 aaKnown RBP24.61■■□□□ 1.53
VPS13B-204ENST00000441350 IREB2P48200 963 aaKnown RBP24.61■■□□□ 1.53
VPS13B-204ENST00000441350 FMR1Q06787 632 aaKnown RBP eCLIP24.61■■□□□ 1.53
VPS13B-204ENST00000441350 RTN1Q16799 776 aa24.61■■□□□ 1.53
VPS13B-204ENST00000441350 PPP1R3FQ6ZSY5 799 aaPredicted RBP24.61■■□□□ 1.53
VPS13B-204ENST00000441350 LLPHQ9BRT6 129 aaKnown RBP24.61■■□□□ 1.53
VPS13B-204ENST00000441350 ARHGEF10LQ9HCE6 1279 aa24.61■■□□□ 1.53
VPS13B-204ENST00000441350 ZSCAN21Q9Y5A6 473 aaPredicted RBP24.61■■□□□ 1.53
VPS13B-204ENST00000441350 CTDNEP1O95476 244 aa24.6■■□□□ 1.53
VPS13B-204ENST00000441350 ITGBL1O95965 494 aaPredicted RBP24.6■■□□□ 1.53
VPS13B-204ENST00000441350 GRM4Q14833 912 aa24.6■■□□□ 1.53
VPS13B-204ENST00000441350 ACER1Q8TDN7 264 aa24.6■■□□□ 1.53
VPS13B-204ENST00000441350 FOXD4L1Q9NU39 408 aa24.6■■□□□ 1.53
VPS13B-204ENST00000441350 TMX2Q9Y320 296 aa24.6■■□□□ 1.53
VPS13B-204ENST00000441350 USP17L5A8MUK1 530 aa24.59■■□□□ 1.53
VPS13B-204ENST00000441350 SNHG28P0DPA3 235 aa24.59■■□□□ 1.53
VPS13B-204ENST00000441350 CCDC84Q86UT8 332 aaPredicted RBP24.59■■□□□ 1.53
VPS13B-204ENST00000441350 PICK1Q9NRD5 415 aa24.59■■□□□ 1.53
VPS13B-204ENST00000441350 CCDC196A0A1B0GTZ2 297 aa24.58■■□□□ 1.53
VPS13B-204ENST00000441350 KIF3CO14782 793 aa24.58■■□□□ 1.53
VPS13B-204ENST00000441350 PTPRAP18433 802 aa24.58■■□□□ 1.53
VPS13B-204ENST00000441350 ECE1P42892 770 aa24.58■■□□□ 1.53
VPS13B-204ENST00000441350 VGLL4Q14135 290 aa24.58■■□□□ 1.53
VPS13B-204ENST00000441350 NTRK3Q16288 839 aa24.58■■□□□ 1.53
VPS13B-204ENST00000441350 NSUN7Q8NE18 718 aaKnown RBP24.58■■□□□ 1.53
VPS13B-204ENST00000441350 GMCL1P1Q8NEA9 526 aa24.58■■□□□ 1.53
VPS13B-204ENST00000441350 CTCFLQ8NI51 663 aaPredicted RBP24.58■■□□□ 1.53
VPS13B-204ENST00000441350 RBM28Q9NW13 759 aaKnown RBP24.58■■□□□ 1.53
VPS13B-204ENST00000441350 PDHBP11177 359 aa24.57■■□□□ 1.52
VPS13B-204ENST00000441350 KIF5BP33176 963 aa24.57■■□□□ 1.52
VPS13B-204ENST00000441350 MOB2Q70IA6 237 aa24.57■■□□□ 1.52
VPS13B-204ENST00000441350 SNCAIPQ9Y6H5 919 aa24.57■■□□□ 1.52
VPS13B-204ENST00000441350 PHIPQ8WWQ0 1821 aa24.57■■□□□ 1.52
VPS13B-204ENST00000441350 TTLL12Q14166 644 aaPredicted RBP24.57■■□□□ 1.52
VPS13B-204ENST00000441350 RASGRP2Q7LDG7 609 aa24.57■■□□□ 1.52
VPS13B-204ENST00000441350 ARMC9Q7Z3E5 817 aa24.57■■□□□ 1.52
VPS13B-204ENST00000441350 SMARCC2Q8TAQ2 1214 aa24.57■■□□□ 1.52
VPS13B-204ENST00000441350 WDR18Q9BV38 432 aa24.57■■□□□ 1.52
VPS13B-204ENST00000441350 MAD2L2Q9UI95 211 aa24.57■■□□□ 1.52
VPS13B-204ENST00000441350 PALM3A6NDB9 673 aaPredicted RBP24.56■■□□□ 1.52
VPS13B-204ENST00000441350 F5H6K3 240 aa24.56■■□□□ 1.52
VPS13B-204ENST00000441350 CPLX1O14810 134 aa24.56■■□□□ 1.52
VPS13B-204ENST00000441350 KLRC3Q07444 240 aa24.56■■□□□ 1.52
VPS13B-204ENST00000441350 LDLRAD1Q5T700 205 aa24.56■■□□□ 1.52
VPS13B-204ENST00000441350 ANKRD13AQ8IZ07 590 aa24.56■■□□□ 1.52
VPS13B-204ENST00000441350 SH2D4AQ9H788 454 aa24.56■■□□□ 1.52
VPS13B-204ENST00000441350 MTMR7Q9Y216 660 aa24.56■■□□□ 1.52
VPS13B-204ENST00000441350 CSADQ9Y600 493 aa24.56■■□□□ 1.52
VPS13B-204ENST00000441350 JAK2O60674 1132 aa24.55■■□□□ 1.52
VPS13B-204ENST00000441350 DTNBO60941 627 aa24.55■■□□□ 1.52
VPS13B-204ENST00000441350 PARP1P09874 1014 aaKnown RBP24.55■■□□□ 1.52
VPS13B-204ENST00000441350 IFNAR1P17181 557 aa24.55■■□□□ 1.52
VPS13B-204ENST00000441350 FUT2Q10981 343 aa24.55■■□□□ 1.52
VPS13B-204ENST00000441350 TMTC3Q6ZXV5 915 aa24.55■■□□□ 1.52
VPS13B-204ENST00000441350 STAG2Q8N3U4 1231 aa24.55■■□□□ 1.52
VPS13B-204ENST00000441350 SMC3Q9UQE7 1217 aa24.55■■□□□ 1.52
VPS13B-204ENST00000441350 FKBP1BP68106 108 aa24.54■■□□□ 1.52
VPS13B-204ENST00000441350 SLFN13Q68D06 897 aa24.54■■□□□ 1.52
VPS13B-204ENST00000441350 CPLX2Q6PUV4 134 aaKnown RBP24.54■■□□□ 1.52
VPS13B-204ENST00000441350 USP17L2Q6R6M4 530 aa24.54■■□□□ 1.52
VPS13B-204ENST00000441350 DCAF4Q8WV16 495 aa24.54■■□□□ 1.52
VPS13B-204ENST00000441350 GMCL1Q96IK5 515 aa24.54■■□□□ 1.52
VPS13B-204ENST00000441350 KIAA1683Q9H0B3 1180 aa24.54■■□□□ 1.52
VPS13B-204ENST00000441350 ZNF408Q9H9D4 720 aa24.54■■□□□ 1.52
VPS13B-204ENST00000441350 CWC22Q9HCG8 908 aaKnown RBP24.54■■□□□ 1.52
VPS13B-204ENST00000441350 ZHX2Q9Y6X8 837 aa24.54■■□□□ 1.52
VPS13B-204ENST00000441350 PTPDC1A2A3K4 754 aa24.53■■□□□ 1.52
VPS13B-204ENST00000441350 UNCXA6NJT0 531 aa24.53■■□□□ 1.52
VPS13B-204ENST00000441350 CDKL5O76039 1030 aa24.53■■□□□ 1.52
VPS13B-204ENST00000441350 PLEKHA8P1O95397 391 aa24.53■■□□□ 1.52
VPS13B-204ENST00000441350 NDUFB10O96000 172 aa24.53■■□□□ 1.52
VPS13B-204ENST00000441350 DDIT3P35638 169 aa24.53■■□□□ 1.52
VPS13B-204ENST00000441350 GNAQP50148 359 aa24.53■■□□□ 1.52
VPS13B-204ENST00000441350 ASPRV1Q53RT3 343 aa24.53■■□□□ 1.52
VPS13B-204ENST00000441350 AS3MTQ9HBK9 375 aa24.53■■□□□ 1.52
VPS13B-204ENST00000441350 GOPCQ9HD26 462 aa24.53■■□□□ 1.52
VPS13B-204ENST00000441350 UBE2Q2LH0YL09 131 aa24.53■■□□□ 1.52
VPS13B-204ENST00000441350 CELF2O95319 508 aaKnown RBP24.53■■□□□ 1.52
VPS13B-204ENST00000441350 ZNF543Q08ER8 600 aa24.53■■□□□ 1.52
VPS13B-204ENST00000441350 KIAA1755Q5JYT7 1200 aa24.53■■□□□ 1.52
VPS13B-204ENST00000441350 NBPF11Q86T75 865 aa24.53■■□□□ 1.52
VPS13B-204ENST00000441350 ZNF280CQ8ND82 737 aa24.53■■□□□ 1.52
VPS13B-204ENST00000441350 VCPKMTQ9H867 229 aa24.53■■□□□ 1.52
VPS13B-204ENST00000441350 TRPM7Q96QT4 1865 aa24.53■■□□□ 1.52
VPS13B-204ENST00000441350 GOLGA8HP0CJ92 632 aa24.52■■□□□ 1.52
VPS13B-204ENST00000441350 GJB2P29033 226 aa24.52■■□□□ 1.52
VPS13B-204ENST00000441350 HMGN5P82970 282 aaKnown RBP24.52■■□□□ 1.52
VPS13B-204ENST00000441350 SPP2Q13103 211 aa24.52■■□□□ 1.52
VPS13B-204ENST00000441350 CMTR1Q8N1G2 835 aaKnown RBP24.52■■□□□ 1.52
VPS13B-204ENST00000441350 SRBD1Q8N5C6 995 aaKnown RBP24.52■■□□□ 1.52
VPS13B-204ENST00000441350 CLMNQ96JQ2 1002 aa24.52■■□□□ 1.52
VPS13B-204ENST00000441350 LZTS2Q9BRK4 669 aa24.52■■□□□ 1.52
VPS13B-204ENST00000441350 GBA2Q9HCG7 927 aaPredicted RBP24.52■■□□□ 1.52
VPS13B-204ENST00000441350 AFG3L2Q9Y4W6 797 aa24.52■■□□□ 1.52
VPS13B-204ENST00000441350 USP17L10C9JJH3 530 aa24.51■■□□□ 1.51
VPS13B-204ENST00000441350 KLRF2D3W0D1 207 aa24.51■■□□□ 1.51
VPS13B-204ENST00000441350 FDPSP14324 419 aaKnown RBP24.51■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms