RNA–Protein interactions for RNA: ENST00000440702.5

FAM20B-202, Transcript of FAM20B, glycosaminoglycan xylosylkinase, humanhuman

TSL 3

Gene FAM20B, Length 603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM20B-202ENST00000440702 MBD4O95243 580 aa20.69■□□□□ 0.9
FAM20B-202ENST00000440702 COL6A1P12109 1028 aa20.69■□□□□ 0.9
FAM20B-202ENST00000440702 CYP2C19P33261 490 aa20.69■□□□□ 0.9
FAM20B-202ENST00000440702 BMP8BP34820 402 aa20.69■□□□□ 0.9
FAM20B-202ENST00000440702 GRB14Q14449 540 aa20.69■□□□□ 0.9
FAM20B-202ENST00000440702 SIRT2Q8IXJ6 389 aa20.69■□□□□ 0.9
FAM20B-202ENST00000440702 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.69■□□□□ 0.9
FAM20B-202ENST00000440702 UBE2OQ9C0C9 1292 aaKnown RBP20.69■□□□□ 0.9
FAM20B-202ENST00000440702 BOLA2Q9H3K6 86 aa20.69■□□□□ 0.9
FAM20B-202ENST00000440702 PAG1Q9NWQ8 432 aa20.69■□□□□ 0.9
FAM20B-202ENST00000440702 A0A0G2JMZ2 1700 aa20.69■□□□□ 0.9
FAM20B-202ENST00000440702 MS4A1P11836 297 aa20.68■□□□□ 0.9
FAM20B-202ENST00000440702 KIAA1755Q5JYT7 1200 aa20.68■□□□□ 0.9
FAM20B-202ENST00000440702 MOV10L1Q9BXT6 1211 aaKnown RBP20.68■□□□□ 0.9
FAM20B-202ENST00000440702 AKR1B1P15121 316 aa20.67■□□□□ 0.9
FAM20B-202ENST00000440702 PLS1Q14651 629 aa20.67■□□□□ 0.9
FAM20B-202ENST00000440702 TMEM179Q6ZVK1 233 aa20.67■□□□□ 0.9
FAM20B-202ENST00000440702 RPAP2Q8IXW5 612 aaPredicted RBP20.67■□□□□ 0.9
FAM20B-202ENST00000440702 SPICE1Q8N0Z3 855 aa20.67■□□□□ 0.9
FAM20B-202ENST00000440702 SENP6Q9GZR1 1112 aaPredicted RBP20.67■□□□□ 0.9
FAM20B-202ENST00000440702 DDX20Q9UHI6 824 aaKnown RBP20.67■□□□□ 0.9
FAM20B-202ENST00000440702 DDX19BQ9UMR2 479 aa20.67■□□□□ 0.9
FAM20B-202ENST00000440702 ZNF236Q9UL36 1845 aa20.67■□□□□ 0.9
FAM20B-202ENST00000440702 DNAH12Q6ZR08 3092 aa20.67■□□□□ 0.9
FAM20B-202ENST00000440702 CYP2D7A0A087X1C5 515 aa20.66■□□□□ 0.9
FAM20B-202ENST00000440702 SMIM22K7EJ46 135 aa20.66■□□□□ 0.9
FAM20B-202ENST00000440702 CHGBP05060 677 aa20.66■□□□□ 0.9
FAM20B-202ENST00000440702 ADORA2AP29274 412 aa20.66■□□□□ 0.9
FAM20B-202ENST00000440702 MDM2Q00987 491 aaPredicted RBP20.66■□□□□ 0.9
FAM20B-202ENST00000440702 COG2Q14746 738 aa20.66■□□□□ 0.9
FAM20B-202ENST00000440702 DPP9Q86TI2 863 aa20.66■□□□□ 0.9
FAM20B-202ENST00000440702 TDHQ8IZJ6 230 aa20.66■□□□□ 0.9
FAM20B-202ENST00000440702 TRPV1Q8NER1 839 aa20.66■□□□□ 0.9
FAM20B-202ENST00000440702 ZBTB40Q9NUA8 1239 aa20.66■□□□□ 0.9
FAM20B-202ENST00000440702 PARP14Q460N5 1801 aa20.66■□□□□ 0.9
FAM20B-202ENST00000440702 COL11A1P12107 1806 aaPredicted RBP20.65■□□□□ 0.9
FAM20B-202ENST00000440702 RAB11FIP3O75154 756 aa20.65■□□□□ 0.9
FAM20B-202ENST00000440702 HOXC6P09630 235 aa20.65■□□□□ 0.9
FAM20B-202ENST00000440702 ADD2P35612 726 aa20.65■□□□□ 0.9
FAM20B-202ENST00000440702 ATN1P54259 1190 aaPredicted RBP20.65■□□□□ 0.9
FAM20B-202ENST00000440702 ICA1Q05084 483 aa20.65■□□□□ 0.9
FAM20B-202ENST00000440702 Q7L0L9 218 aa20.65■□□□□ 0.9
FAM20B-202ENST00000440702 SPATC1LQ9H0A9 340 aa20.65■□□□□ 0.9
FAM20B-202ENST00000440702 ARHGEF10LQ9HCE6 1279 aa20.65■□□□□ 0.9
FAM20B-202ENST00000440702 HOXC10Q9NYD6 342 aa20.65■□□□□ 0.9
FAM20B-202ENST00000440702 SWAP70Q9UH65 585 aa20.65■□□□□ 0.9
FAM20B-202ENST00000440702 COL6A3P12111 3177 aa20.64■□□□□ 0.89
FAM20B-202ENST00000440702 FLOT1O75955 427 aa20.64■□□□□ 0.89
FAM20B-202ENST00000440702 ERCC3P19447 782 aa20.64■□□□□ 0.89
FAM20B-202ENST00000440702 ANO1Q5XXA6 986 aa20.64■□□□□ 0.89
FAM20B-202ENST00000440702 SLC17A8Q8NDX2 589 aa20.64■□□□□ 0.89
FAM20B-202ENST00000440702 ATG4CQ96DT6 458 aa20.64■□□□□ 0.89
FAM20B-202ENST00000440702 ZNFX1Q9P2E3 1918 aaKnown RBP20.64■□□□□ 0.89
FAM20B-202ENST00000440702 MYCNP04198 464 aaPredicted RBP20.63■□□□□ 0.89
FAM20B-202ENST00000440702 CYBAP13498 195 aa20.63■□□□□ 0.89
FAM20B-202ENST00000440702 DSG3P32926 999 aa20.63■□□□□ 0.89
FAM20B-202ENST00000440702 NCAPG2Q86XI2 1143 aa20.63■□□□□ 0.89
FAM20B-202ENST00000440702 DEFB123Q8N688 67 aa20.63■□□□□ 0.89
FAM20B-202ENST00000440702 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.63■□□□□ 0.89
FAM20B-202ENST00000440702 RAD21O60216 631 aa20.62■□□□□ 0.89
FAM20B-202ENST00000440702 MSCO60682 206 aa20.62■□□□□ 0.89
FAM20B-202ENST00000440702 ATP5JP18859 108 aa20.62■□□□□ 0.89
FAM20B-202ENST00000440702 CDK8P49336 464 aa20.62■□□□□ 0.89
FAM20B-202ENST00000440702 GJC2Q5T442 439 aaPredicted RBP20.62■□□□□ 0.89
FAM20B-202ENST00000440702 SIAH1Q8IUQ4 282 aa20.62■□□□□ 0.89
FAM20B-202ENST00000440702 AMOTL1Q8IY63 956 aa20.62■□□□□ 0.89
FAM20B-202ENST00000440702 LPAR1Q92633 364 aa20.62■□□□□ 0.89
FAM20B-202ENST00000440702 HAUS7Q99871 368 aa20.62■□□□□ 0.89
FAM20B-202ENST00000440702 ATP8A2Q9NTI2 1148 aa20.62■□□□□ 0.89
FAM20B-202ENST00000440702 USP17L12C9JPN9 530 aa20.61■□□□□ 0.89
FAM20B-202ENST00000440702 USP17L21D6R901 530 aa20.61■□□□□ 0.89
FAM20B-202ENST00000440702 SMARCA5O60264 1052 aaPredicted RBP20.61■□□□□ 0.89
FAM20B-202ENST00000440702 COBLO75128 1261 aa20.61■□□□□ 0.89
FAM20B-202ENST00000440702 LRIT3Q3SXY7 679 aa20.61■□□□□ 0.89
FAM20B-202ENST00000440702 MB21D1Q8N884 522 aa20.61■□□□□ 0.89
FAM20B-202ENST00000440702 SHCBP1Q8NEM2 672 aa20.61■□□□□ 0.89
FAM20B-202ENST00000440702 SH2D4AQ9H788 454 aa20.61■□□□□ 0.89
FAM20B-202ENST00000440702 VCPKMTQ9H867 229 aa20.61■□□□□ 0.89
FAM20B-202ENST00000440702 TMX2Q9Y320 296 aa20.61■□□□□ 0.89
FAM20B-202ENST00000440702 SLC4A4Q9Y6R1 1079 aa20.61■□□□□ 0.89
FAM20B-202ENST00000440702 DNM1LO00429 736 aa20.6■□□□□ 0.89
FAM20B-202ENST00000440702 RTP1P59025 263 aa20.6■□□□□ 0.89
FAM20B-202ENST00000440702 PRAMEF19Q5SWL8 479 aa20.6■□□□□ 0.89
FAM20B-202ENST00000440702 C12orf60Q5U649 245 aa20.6■□□□□ 0.89
FAM20B-202ENST00000440702 OLFML2BQ68BL8 750 aa20.6■□□□□ 0.89
FAM20B-202ENST00000440702 DDRGK1Q96HY6 314 aa20.6■□□□□ 0.89
FAM20B-202ENST00000440702 STRNO43815 780 aa20.59■□□□□ 0.89
FAM20B-202ENST00000440702 C16orf86Q6ZW13 317 aa20.59■□□□□ 0.89
FAM20B-202ENST00000440702 STK11IPQ8N1F8 1099 aa20.59■□□□□ 0.89
FAM20B-202ENST00000440702 ATP11BQ9Y2G3 1177 aa20.59■□□□□ 0.89
FAM20B-202ENST00000440702 SMCHD1A6NHR9 2005 aa20.59■□□□□ 0.89
FAM20B-202ENST00000440702 PLXNA1Q9UIW2 1896 aa20.58■□□□□ 0.89
FAM20B-202ENST00000440702 LTBP2Q14767 1821 aa20.58■□□□□ 0.89
FAM20B-202ENST00000440702 KBTBD13C9JR72 458 aa20.58■□□□□ 0.89
FAM20B-202ENST00000440702 WDR46O15213 610 aaKnown RBP20.58■□□□□ 0.89
FAM20B-202ENST00000440702 IGHA2P01877 340 aa20.58■□□□□ 0.89
FAM20B-202ENST00000440702 EEF2P13639 858 aaKnown RBP20.58■□□□□ 0.89
FAM20B-202ENST00000440702 UBE3CQ15386 1083 aa20.58■□□□□ 0.89
FAM20B-202ENST00000440702 C20orf194Q5TEA3 1177 aa20.58■□□□□ 0.89
FAM20B-202ENST00000440702 CCDC17Q96LX7 622 aa20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms