RNA–Protein interactions for RNA: ENST00000439806.6

CPNE1-218, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-218ENST00000439806 KRT27Q7Z3Y8 459 aa11.92□□□□□ -0.5
CPNE1-218ENST00000439806 TMC6Q7Z403 805 aa11.92□□□□□ -0.5
CPNE1-218ENST00000439806 LRRC8AQ8IWT6 810 aa11.92□□□□□ -0.5
CPNE1-218ENST00000439806 TEX11Q8IYF3 940 aa11.92□□□□□ -0.5
CPNE1-218ENST00000439806 TRIML1Q8N9V2 468 aa11.92□□□□□ -0.5
CPNE1-218ENST00000439806 CCDC150Q8NCX0 1101 aa11.92□□□□□ -0.5
CPNE1-218ENST00000439806 PNMA1Q8ND90 353 aa11.92□□□□□ -0.5
CPNE1-218ENST00000439806 MYRIPQ8NFW9 859 aa11.92□□□□□ -0.5
CPNE1-218ENST00000439806 TBC1D22AQ8WUA7 517 aa11.92□□□□□ -0.5
CPNE1-218ENST00000439806 XPO4Q9C0E2 1151 aaKnown RBP11.92□□□□□ -0.5
CPNE1-218ENST00000439806 TCP11L1Q9NUJ3 509 aa11.92□□□□□ -0.5
CPNE1-218ENST00000439806 MKRN1Q9UHC7 482 aaKnown RBP11.92□□□□□ -0.5
CPNE1-218ENST00000439806 MAN1B1Q9UKM7 699 aa11.92□□□□□ -0.5
CPNE1-218ENST00000439806 GPR75-ASB3A0A0A6YYF3 556 aa11.91□□□□□ -0.5
CPNE1-218ENST00000439806 POLRMTO00411 1230 aaKnown RBP11.91□□□□□ -0.5
CPNE1-218ENST00000439806 FOXN1O15353 648 aa11.91□□□□□ -0.5
CPNE1-218ENST00000439806 TRIM37O94972 964 aa11.91□□□□□ -0.5
CPNE1-218ENST00000439806 SERPINC1P01008 464 aa11.91□□□□□ -0.5
CPNE1-218ENST00000439806 PRR29P0C7W0 189 aa11.91□□□□□ -0.5
CPNE1-218ENST00000439806 PRKCSHP14314 528 aaPredicted RBP11.91□□□□□ -0.5
CPNE1-218ENST00000439806 HOXA10P31260 410 aaPredicted RBP11.91□□□□□ -0.5
CPNE1-218ENST00000439806 TRAPPC10P48553 1259 aa11.91□□□□□ -0.5
CPNE1-218ENST00000439806 DDR1Q08345 913 aa11.91□□□□□ -0.5
CPNE1-218ENST00000439806 TPD52L1Q16890 204 aaPredicted RBP11.91□□□□□ -0.5
CPNE1-218ENST00000439806 RCSD1Q6JBY9 416 aa11.91□□□□□ -0.5
CPNE1-218ENST00000439806 PDILTQ8N807 584 aa11.91□□□□□ -0.5
CPNE1-218ENST00000439806 CCDC148Q8NFR7 591 aa11.91□□□□□ -0.5
CPNE1-218ENST00000439806 TBC1D16Q8TBP0 767 aa11.91□□□□□ -0.5
CPNE1-218ENST00000439806 TNFRSF25Q93038 417 aa11.91□□□□□ -0.5
CPNE1-218ENST00000439806 DHX58Q96C10 678 aa11.91□□□□□ -0.5
CPNE1-218ENST00000439806 OSBPL5Q9H0X9 879 aaPredicted RBP11.91□□□□□ -0.5
CPNE1-218ENST00000439806 SH3GLB2Q9NR46 395 aa11.91□□□□□ -0.5
CPNE1-218ENST00000439806 PODXL2Q9NZ53 605 aa11.91□□□□□ -0.5
CPNE1-218ENST00000439806 QSER1Q2KHR3 1735 aa11.91□□□□□ -0.5
CPNE1-218ENST00000439806 ACTN4O43707 911 aaKnown RBP11.9□□□□□ -0.5
CPNE1-218ENST00000439806 SKILP12757 684 aa11.9□□□□□ -0.5
CPNE1-218ENST00000439806 MDM2Q00987 491 aaPredicted RBP11.9□□□□□ -0.5
CPNE1-218ENST00000439806 EARS2Q5JPH6 523 aaKnown RBP11.9□□□□□ -0.5
CPNE1-218ENST00000439806 MFSD14BQ5SR56 506 aa11.9□□□□□ -0.5
CPNE1-218ENST00000439806 PIK3AP1Q6ZUJ8 805 aa11.9□□□□□ -0.5
CPNE1-218ENST00000439806 BLIDQ8IZY5 108 aa11.9□□□□□ -0.5
CPNE1-218ENST00000439806 MLKLQ8NB16 471 aa11.9□□□□□ -0.5
CPNE1-218ENST00000439806 LZTS2Q9BRK4 669 aa11.9□□□□□ -0.5
CPNE1-218ENST00000439806 PYM1Q9BRP8 204 aaKnown RBP11.9□□□□□ -0.5
CPNE1-218ENST00000439806 IL17RBQ9NRM6 502 aa11.9□□□□□ -0.5
CPNE1-218ENST00000439806 NRXN2Q9P2S2 1712 aa11.9□□□□□ -0.5
CPNE1-218ENST00000439806 BAZ2BQ9UIF8 2168 aaKnown RBP11.9□□□□□ -0.5
CPNE1-218ENST00000439806 SNED1Q8TER0 1413 aa11.89□□□□□ -0.51
CPNE1-218ENST00000439806 USP17L3A6NCW0 530 aa11.89□□□□□ -0.51
CPNE1-218ENST00000439806 USP17L4A6NCW7 530 aa11.89□□□□□ -0.51
CPNE1-218ENST00000439806 RASA1P20936 1047 aa11.89□□□□□ -0.51
CPNE1-218ENST00000439806 CDK8P49336 464 aa11.89□□□□□ -0.51
CPNE1-218ENST00000439806 UBASH3AP57075 661 aa11.89□□□□□ -0.51
CPNE1-218ENST00000439806 CCZ1BP86790 482 aa11.89□□□□□ -0.51
CPNE1-218ENST00000439806 CCZ1P86791 482 aaPredicted RBP11.89□□□□□ -0.51
CPNE1-218ENST00000439806 ATP2C1P98194 919 aaPredicted RBP11.89□□□□□ -0.51
CPNE1-218ENST00000439806 ARID5BQ14865 1188 aa11.89□□□□□ -0.51
CPNE1-218ENST00000439806 NPY5RQ15761 445 aa11.89□□□□□ -0.51
CPNE1-218ENST00000439806 TXNRD1Q16881 649 aa11.89□□□□□ -0.51
CPNE1-218ENST00000439806 USP17L1Q7RTZ2 530 aa11.89□□□□□ -0.51
CPNE1-218ENST00000439806 SP8Q8IXZ3 490 aa11.89□□□□□ -0.51
CPNE1-218ENST00000439806 SLC44A5Q8NCS7 719 aa11.89□□□□□ -0.51
CPNE1-218ENST00000439806 EYA3Q99504 573 aa11.89□□□□□ -0.51
CPNE1-218ENST00000439806 POLLQ9UGP5 575 aa11.89□□□□□ -0.51
CPNE1-218ENST00000439806 PCDHA4Q9UN74 947 aa11.89□□□□□ -0.51
CPNE1-218ENST00000439806 MTMR7Q9Y216 660 aa11.89□□□□□ -0.51
CPNE1-218ENST00000439806 GAKO14976 1311 aa11.88□□□□□ -0.51
CPNE1-218ENST00000439806 FAM205AQ6ZU69 1335 aa11.88□□□□□ -0.51
CPNE1-218ENST00000439806 CCDC194A0A1B0GVG4 234 aa11.88□□□□□ -0.51
CPNE1-218ENST00000439806 VWA3AA6NCI4 1184 aa11.88□□□□□ -0.51
CPNE1-218ENST00000439806 TNNT1P13805 278 aa11.88□□□□□ -0.51
CPNE1-218ENST00000439806 SFPQP23246 707 aaKnown RBP eCLIP11.88□□□□□ -0.518e-7■□□□□ 11.1
CPNE1-218ENST00000439806 SARSP49591 514 aaKnown RBP11.88□□□□□ -0.51
CPNE1-218ENST00000439806 PLCD1P51178 756 aa11.88□□□□□ -0.51
CPNE1-218ENST00000439806 PTGDRQ13258 359 aa11.88□□□□□ -0.51
CPNE1-218ENST00000439806 MORC3Q14149 939 aa11.88□□□□□ -0.51
CPNE1-218ENST00000439806 CFAP100Q494V2 611 aa11.88□□□□□ -0.51
CPNE1-218ENST00000439806 NOM1Q5C9Z4 860 aaKnown RBP11.88□□□□□ -0.51
CPNE1-218ENST00000439806 NT5DC1Q5TFE4 455 aa11.88□□□□□ -0.51
CPNE1-218ENST00000439806 C16orf86Q6ZW13 317 aa11.88□□□□□ -0.51
CPNE1-218ENST00000439806 FOXP4Q8IVH2 680 aaPredicted RBP11.88□□□□□ -0.51
CPNE1-218ENST00000439806 GRAMD1CQ8IYS0 662 aa11.88□□□□□ -0.51
CPNE1-218ENST00000439806 STAG2Q8N3U4 1231 aa11.88□□□□□ -0.51
CPNE1-218ENST00000439806 SYMPKQ92797 1274 aaKnown RBP11.88□□□□□ -0.51
CPNE1-218ENST00000439806 GPKOWQ92917 476 aaPredicted RBP eCLIP11.88□□□□□ -0.51
CPNE1-218ENST00000439806 FAM163AQ96GL9 167 aaPredicted RBP11.88□□□□□ -0.51
CPNE1-218ENST00000439806 C16orf45Q96MC5 204 aaPredicted RBP11.88□□□□□ -0.51
CPNE1-218ENST00000439806 TMEM47Q9BQJ4 181 aa11.88□□□□□ -0.51
CPNE1-218ENST00000439806 COA1Q9GZY4 146 aa11.88□□□□□ -0.51
CPNE1-218ENST00000439806 MAD2L2Q9UI95 211 aa11.88□□□□□ -0.51
CPNE1-218ENST00000439806 STX8Q9UNK0 236 aa11.88□□□□□ -0.51
CPNE1-218ENST00000439806 FLT1P17948 1338 aa11.87□□□□□ -0.51
CPNE1-218ENST00000439806 COL11A2P13942 1736 aaPredicted RBP11.87□□□□□ -0.51
CPNE1-218ENST00000439806 G3V3G9 751 aa11.87□□□□□ -0.51
CPNE1-218ENST00000439806 WNT7AO00755 349 aa11.87□□□□□ -0.51
CPNE1-218ENST00000439806 RIMBP2O15034 1052 aa11.87□□□□□ -0.51
CPNE1-218ENST00000439806 PARP1P09874 1014 aaKnown RBP11.87□□□□□ -0.51
CPNE1-218ENST00000439806 SLFN14P0C7P3 912 aa11.87□□□□□ -0.51
CPNE1-218ENST00000439806 CDK11BP21127 795 aaKnown RBP11.87□□□□□ -0.51
CPNE1-218ENST00000439806 MCM7P33993 719 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms