RNA–Protein interactions for RNA: ENST00000439765.3

CCDC188-201, Transcript of coiled-coil domain containing 188, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CCDC188, Length 1,475 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-201ENST00000439765 PRKCZQ05513 592 aa20.98■□□□□ 0.95
CCDC188-201ENST00000439765 PABPC4Q13310 644 aaKnown RBP eCLIP20.98■□□□□ 0.95
CCDC188-201ENST00000439765 FAM110CQ1W6H9 321 aa20.98■□□□□ 0.95
CCDC188-201ENST00000439765 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.98■□□□□ 0.95
CCDC188-201ENST00000439765 ARHGEF10LQ9HCE6 1279 aa20.98■□□□□ 0.95
CCDC188-201ENST00000439765 INCENPQ9NQS7 918 aa20.98■□□□□ 0.95
CCDC188-201ENST00000439765 VCAM1P19320 739 aa20.97■□□□□ 0.95
CCDC188-201ENST00000439765 USP14P54578 494 aa20.97■□□□□ 0.95
CCDC188-201ENST00000439765 ZNF444Q8N0Y2 327 aaPredicted RBP20.97■□□□□ 0.95
CCDC188-201ENST00000439765 C12orf42Q96LP6 360 aa20.97■□□□□ 0.95
CCDC188-201ENST00000439765 ASCC2Q9H1I8 757 aaPredicted RBP20.97■□□□□ 0.95
CCDC188-201ENST00000439765 ANAPC4Q9UJX5 808 aa20.97■□□□□ 0.95
CCDC188-201ENST00000439765 TSPY3P0CV98 308 aa20.96■□□□□ 0.95
CCDC188-201ENST00000439765 TSPY8P0CW00 308 aa20.96■□□□□ 0.95
CCDC188-201ENST00000439765 EEF2P13639 858 aaKnown RBP20.96■□□□□ 0.95
CCDC188-201ENST00000439765 GCLCP48506 637 aaPredicted RBP20.96■□□□□ 0.95
CCDC188-201ENST00000439765 IRX3P78415 501 aaPredicted RBP20.96■□□□□ 0.95
CCDC188-201ENST00000439765 FAM47AQ5JRC9 791 aa20.96■□□□□ 0.95
CCDC188-201ENST00000439765 SIAH1Q8IUQ4 282 aa20.96■□□□□ 0.95
CCDC188-201ENST00000439765 RUFY2Q8WXA3 655 aa20.96■□□□□ 0.95
CCDC188-201ENST00000439765 NBPF3Q9H094 633 aa20.96■□□□□ 0.95
CCDC188-201ENST00000439765 KANSL2Q9H9L4 492 aa20.96■□□□□ 0.95
CCDC188-201ENST00000439765 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.96■□□□□ 0.95
CCDC188-201ENST00000439765 TACC3Q9Y6A5 838 aa20.96■□□□□ 0.95
CCDC188-201ENST00000439765 RLFQ13129 1914 aa20.96■□□□□ 0.95
CCDC188-201ENST00000439765 PLIN4Q96Q06 1357 aa20.96■□□□□ 0.95
CCDC188-201ENST00000439765 ANKRD13CQ8N6S4 541 aa20.95■□□□□ 0.94
CCDC188-201ENST00000439765 DSCC1Q9BVC3 393 aa20.95■□□□□ 0.94
CCDC188-201ENST00000439765 SH2D4AQ9H788 454 aa20.95■□□□□ 0.94
CCDC188-201ENST00000439765 TOMM22Q9NS69 142 aa20.95■□□□□ 0.94
CCDC188-201ENST00000439765 A0A0G2JMZ2 1700 aa20.95■□□□□ 0.94
CCDC188-201ENST00000439765 TNPO2O14787 897 aaKnown RBP20.94■□□□□ 0.94
CCDC188-201ENST00000439765 SLC34A2O95436 690 aa20.94■□□□□ 0.94
CCDC188-201ENST00000439765 IRF5Q13568 498 aa20.94■□□□□ 0.94
CCDC188-201ENST00000439765 MTFR1Q15390 333 aa20.94■□□□□ 0.94
CCDC188-201ENST00000439765 TBC1D10CQ8IV04 446 aa20.94■□□□□ 0.94
CCDC188-201ENST00000439765 SPICE1Q8N0Z3 855 aa20.94■□□□□ 0.94
CCDC188-201ENST00000439765 SLAIN1Q8ND83 568 aa20.94■□□□□ 0.94
CCDC188-201ENST00000439765 CEP95Q96GE4 821 aa20.94■□□□□ 0.94
CCDC188-201ENST00000439765 GABRQQ9UN88 632 aa20.94■□□□□ 0.94
CCDC188-201ENST00000439765 COL11A1P12107 1806 aaPredicted RBP20.94■□□□□ 0.94
CCDC188-201ENST00000439765 RAD21O60216 631 aa20.94■□□□□ 0.94
CCDC188-201ENST00000439765 MYCP01106 439 aaPredicted RBP20.94■□□□□ 0.94
CCDC188-201ENST00000439765 HOXA7P31268 230 aaPredicted RBP20.94■□□□□ 0.94
CCDC188-201ENST00000439765 TFAP4Q01664 338 aa20.94■□□□□ 0.94
CCDC188-201ENST00000439765 RRP12Q5JTH9 1297 aaKnown RBP20.94■□□□□ 0.94
CCDC188-201ENST00000439765 KIAA1755Q5JYT7 1200 aa20.94■□□□□ 0.94
CCDC188-201ENST00000439765 RPAP3Q9H6T3 665 aaPredicted RBP20.94■□□□□ 0.94
CCDC188-201ENST00000439765 TMX2Q9Y320 296 aa20.94■□□□□ 0.94
CCDC188-201ENST00000439765 IGKV6D-41A0A0C4DH26 115 aa20.93■□□□□ 0.94
CCDC188-201ENST00000439765 TSPY2A6NKD2 308 aa20.93■□□□□ 0.94
CCDC188-201ENST00000439765 SGSM2O43147 1006 aa20.93■□□□□ 0.94
CCDC188-201ENST00000439765 RANBP6O60518 1105 aaKnown RBP20.93■□□□□ 0.94
CCDC188-201ENST00000439765 FLT3LGP49771 235 aa20.93■□□□□ 0.94
CCDC188-201ENST00000439765 PXYLP1Q8TE99 480 aa20.93■□□□□ 0.94
CCDC188-201ENST00000439765 HERVK_113P62684 666 aa20.92■□□□□ 0.94
CCDC188-201ENST00000439765 UBXN2AP68543 259 aa20.92■□□□□ 0.94
CCDC188-201ENST00000439765 NEDD1Q8NHV4 660 aa20.92■□□□□ 0.94
CCDC188-201ENST00000439765 TANGO6Q9C0B7 1094 aa20.92■□□□□ 0.94
CCDC188-201ENST00000439765 VCPKMTQ9H867 229 aa20.92■□□□□ 0.94
CCDC188-201ENST00000439765 NEDD4P46934 1319 aa20.91■□□□□ 0.94
CCDC188-201ENST00000439765 ZNF213O14771 459 aa20.91■□□□□ 0.94
CCDC188-201ENST00000439765 ORC4O43929 436 aa20.91■□□□□ 0.94
CCDC188-201ENST00000439765 NMT2O60551 498 aa20.91■□□□□ 0.94
CCDC188-201ENST00000439765 PTH1RQ03431 593 aa20.91■□□□□ 0.94
CCDC188-201ENST00000439765 AKNAD1Q5T1N1 836 aa20.91■□□□□ 0.94
CCDC188-201ENST00000439765 LRRC47Q8N1G4 583 aaKnown RBP20.91■□□□□ 0.94
CCDC188-201ENST00000439765 NKX2-3Q8TAU0 364 aa20.91■□□□□ 0.94
CCDC188-201ENST00000439765 LPAR1Q92633 364 aa20.91■□□□□ 0.94
CCDC188-201ENST00000439765 COA7Q96BR5 231 aa20.91■□□□□ 0.94
CCDC188-201ENST00000439765 SHISA4Q96DD7 197 aa20.91■□□□□ 0.94
CCDC188-201ENST00000439765 P2RX7Q99572 595 aaKnown RBP20.91■□□□□ 0.94
CCDC188-201ENST00000439765 MTMR4Q9NYA4 1195 aa20.91■□□□□ 0.94
CCDC188-201ENST00000439765 MORF4L1Q9UBU8 362 aa20.91■□□□□ 0.94
CCDC188-201ENST00000439765 USP17L15C9J2P7 530 aa20.9■□□□□ 0.94
CCDC188-201ENST00000439765 USP17L13C9JLJ4 530 aa20.9■□□□□ 0.94
CCDC188-201ENST00000439765 USP17L11C9JVI0 530 aa20.9■□□□□ 0.94
CCDC188-201ENST00000439765 USP17L18D6R9N7 530 aa20.9■□□□□ 0.94
CCDC188-201ENST00000439765 USP17L22D6RA61 530 aa20.9■□□□□ 0.94
CCDC188-201ENST00000439765 USP17L17D6RBQ6 530 aa20.9■□□□□ 0.94
CCDC188-201ENST00000439765 USP17L19D6RCP7 530 aa20.9■□□□□ 0.94
CCDC188-201ENST00000439765 USP17L20D6RJB6 530 aa20.9■□□□□ 0.94
CCDC188-201ENST00000439765 ADCY3O60266 1144 aa20.9■□□□□ 0.94
CCDC188-201ENST00000439765 PEX10O60683 326 aa20.9■□□□□ 0.94
CCDC188-201ENST00000439765 GJB1P08034 283 aa20.9■□□□□ 0.94
CCDC188-201ENST00000439765 USP17L24Q0WX57 530 aa20.9■□□□□ 0.94
CCDC188-201ENST00000439765 IMMTQ16891 758 aaKnown RBP20.9■□□□□ 0.94
CCDC188-201ENST00000439765 MFSD6Q6ZSS7 791 aa20.9■□□□□ 0.94
CCDC188-201ENST00000439765 STAG1Q8WVM7 1258 aa20.9■□□□□ 0.94
CCDC188-201ENST00000439765 GOPCQ9HD26 462 aa20.9■□□□□ 0.94
CCDC188-201ENST00000439765 NYAP2Q9P242 653 aa20.9■□□□□ 0.94
CCDC188-201ENST00000439765 CLIP2Q9UDT6 1046 aa20.9■□□□□ 0.94
CCDC188-201ENST00000439765 CDC45O75419 566 aa20.89■□□□□ 0.94
CCDC188-201ENST00000439765 TTLL1O95922 423 aa20.89■□□□□ 0.94
CCDC188-201ENST00000439765 FGRP09769 529 aa20.89■□□□□ 0.94
CCDC188-201ENST00000439765 CCL5P13501 91 aa20.89■□□□□ 0.94
CCDC188-201ENST00000439765 GJA8P48165 433 aa20.89■□□□□ 0.94
CCDC188-201ENST00000439765 CTNNA3Q9UI47 895 aa20.89■□□□□ 0.94
CCDC188-201ENST00000439765 CATSPERGQ6ZRH7 1159 aa20.88■□□□□ 0.93
CCDC188-201ENST00000439765 ESYT1Q9BSJ8 1104 aa20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 184.5 ms