RNA–Protein interactions for RNA: ENST00000439369.6

SCLT1-202, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 966 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-202ENST00000439369 LPAR1Q92633 364 aa14.83□□□□□ -0.04
SCLT1-202ENST00000439369 GMCL1Q96IK5 515 aa14.83□□□□□ -0.04
SCLT1-202ENST00000439369 GOPCQ9HD26 462 aa14.83□□□□□ -0.04
SCLT1-202ENST00000439369 BRPF3Q9ULD4 1205 aa14.83□□□□□ -0.04
SCLT1-202ENST00000439369 TPCN1Q9ULQ1 816 aa14.83□□□□□ -0.04
SCLT1-202ENST00000439369 GOLGA8BA8MQT2 603 aa14.82□□□□□ -0.04
SCLT1-202ENST00000439369 K7ELQ4 463 aaPredicted RBP14.82□□□□□ -0.04
SCLT1-202ENST00000439369 CXCL11O14625 94 aa14.82□□□□□ -0.04
SCLT1-202ENST00000439369 DHX16O60231 1041 aaKnown RBP14.82□□□□□ -0.04
SCLT1-202ENST00000439369 PFKFB2O60825 505 aa14.82□□□□□ -0.04
SCLT1-202ENST00000439369 CD2BP2O95400 341 aaKnown RBP14.82□□□□□ -0.04
SCLT1-202ENST00000439369 SNHG28P0DPA3 235 aa14.82□□□□□ -0.04
SCLT1-202ENST00000439369 PDIA3P30101 505 aaKnown RBP14.82□□□□□ -0.04
SCLT1-202ENST00000439369 KIF5BP33176 963 aa14.82□□□□□ -0.04
SCLT1-202ENST00000439369 ATP2B2Q01814 1243 aa14.82□□□□□ -0.04
SCLT1-202ENST00000439369 PPIL2Q13356 520 aa14.82□□□□□ -0.04
SCLT1-202ENST00000439369 CLEC10AQ8IUN9 316 aa14.82□□□□□ -0.04
SCLT1-202ENST00000439369 DCAF4Q8WV16 495 aa14.82□□□□□ -0.04
SCLT1-202ENST00000439369 SLC10A4Q96EP9 437 aa14.82□□□□□ -0.04
SCLT1-202ENST00000439369 HHIPL1Q96JK4 782 aa14.82□□□□□ -0.04
SCLT1-202ENST00000439369 VCPKMTQ9H867 229 aa14.82□□□□□ -0.04
SCLT1-202ENST00000439369 SENP2Q9HC62 589 aa14.82□□□□□ -0.04
SCLT1-202ENST00000439369 FZD1Q9UP38 647 aa14.82□□□□□ -0.04
SCLT1-202ENST00000439369 AFG3L2Q9Y4W6 797 aa14.82□□□□□ -0.04
SCLT1-202ENST00000439369 ZHX2Q9Y6X8 837 aa14.82□□□□□ -0.04
SCLT1-202ENST00000439369 A0A1W2PRG0 241 aa14.81□□□□□ -0.04
SCLT1-202ENST00000439369 USP17L10C9JJH3 530 aa14.81□□□□□ -0.04
SCLT1-202ENST00000439369 GNAQP50148 359 aa14.81□□□□□ -0.04
SCLT1-202ENST00000439369 BACE1P56817 501 aa14.81□□□□□ -0.04
SCLT1-202ENST00000439369 ASPRV1Q53RT3 343 aa14.81□□□□□ -0.04
SCLT1-202ENST00000439369 SH3D19Q5HYK7 790 aa14.81□□□□□ -0.04
SCLT1-202ENST00000439369 MOB2Q70IA6 237 aa14.81□□□□□ -0.04
SCLT1-202ENST00000439369 TMX3Q96JJ7 454 aa14.81□□□□□ -0.04
SCLT1-202ENST00000439369 CLMNQ96JQ2 1002 aa14.81□□□□□ -0.04
SCLT1-202ENST00000439369 C12orf42Q96LP6 360 aa14.81□□□□□ -0.04
SCLT1-202ENST00000439369 FEZ1Q99689 392 aa14.81□□□□□ -0.04
SCLT1-202ENST00000439369 SLKQ9H2G2 1235 aaPredicted RBP14.81□□□□□ -0.04
SCLT1-202ENST00000439369 RBM28Q9NW13 759 aaKnown RBP14.81□□□□□ -0.04
SCLT1-202ENST00000439369 KCNH4Q9UQ05 1017 aa14.81□□□□□ -0.04
SCLT1-202ENST00000439369 TLL2Q9Y6L7 1015 aa14.81□□□□□ -0.04
SCLT1-202ENST00000439369 PHIPQ8WWQ0 1821 aa14.8□□□□□ -0.04
SCLT1-202ENST00000439369 TMEM88BA6NKF7 163 aa14.8□□□□□ -0.04
SCLT1-202ENST00000439369 F5H6K3 240 aa14.8□□□□□ -0.04
SCLT1-202ENST00000439369 ZBTB48P10074 688 aaPredicted RBP14.8□□□□□ -0.04
SCLT1-202ENST00000439369 METAP2P50579 478 aaKnown RBP eCLIP14.8□□□□□ -0.04
SCLT1-202ENST00000439369 KLRC3Q07444 240 aa14.8□□□□□ -0.04
SCLT1-202ENST00000439369 GRM4Q14833 912 aa14.8□□□□□ -0.04
SCLT1-202ENST00000439369 ME3Q16798 604 aa14.8□□□□□ -0.04
SCLT1-202ENST00000439369 GPATCH4Q5T3I0 446 aaKnown RBP14.8□□□□□ -0.04
SCLT1-202ENST00000439369 USP17L2Q6R6M4 530 aa14.8□□□□□ -0.04
SCLT1-202ENST00000439369 SAPCD2Q86UD0 394 aa14.8□□□□□ -0.04
SCLT1-202ENST00000439369 LRRC47Q8N1G4 583 aaKnown RBP14.8□□□□□ -0.04
SCLT1-202ENST00000439369 FANCBQ8NB91 859 aa14.8□□□□□ -0.04
SCLT1-202ENST00000439369 CTCFLQ8NI51 663 aaPredicted RBP14.8□□□□□ -0.04
SCLT1-202ENST00000439369 ACER1Q8TDN7 264 aa14.8□□□□□ -0.04
SCLT1-202ENST00000439369 GTF3C6Q969F1 213 aa14.8□□□□□ -0.04
SCLT1-202ENST00000439369 LZTS2Q9BRK4 669 aa14.8□□□□□ -0.04
SCLT1-202ENST00000439369 ELP3Q9H9T3 547 aa14.8□□□□□ -0.04
SCLT1-202ENST00000439369 HPS5Q9UPZ3 1129 aa14.8□□□□□ -0.04
SCLT1-202ENST00000439369 MYH4Q9Y623 1939 aa14.8□□□□□ -0.04
SCLT1-202ENST00000439369 GOLGA8AA7E2F4 631 aa14.79□□□□□ -0.04
SCLT1-202ENST00000439369 NDUFB10O96000 172 aa14.79□□□□□ -0.04
SCLT1-202ENST00000439369 PDHBP11177 359 aa14.79□□□□□ -0.04
SCLT1-202ENST00000439369 SMARCA1P28370 1054 aa14.79□□□□□ -0.04
SCLT1-202ENST00000439369 ECE1P42892 770 aa14.79□□□□□ -0.04
SCLT1-202ENST00000439369 HUNKP57058 714 aa14.79□□□□□ -0.04
SCLT1-202ENST00000439369 SPP2Q13103 211 aa14.79□□□□□ -0.04
SCLT1-202ENST00000439369 CUL4AQ13619 759 aa14.79□□□□□ -0.04
SCLT1-202ENST00000439369 RTN1Q16799 776 aa14.79□□□□□ -0.04
SCLT1-202ENST00000439369 SLFN13Q68D06 897 aa14.79□□□□□ -0.04
SCLT1-202ENST00000439369 CPLX2Q6PUV4 134 aaKnown RBP14.79□□□□□ -0.04
SCLT1-202ENST00000439369 MICU3Q86XE3 530 aa14.79□□□□□ -0.04
SCLT1-202ENST00000439369 OPTNQ96CV9 577 aa14.79□□□□□ -0.04
SCLT1-202ENST00000439369 PALM3A6NDB9 673 aaPredicted RBP14.78□□□□□ -0.04
SCLT1-202ENST00000439369 WDR46O15213 610 aaKnown RBP14.78□□□□□ -0.04
SCLT1-202ENST00000439369 PLA2G6O60733 806 aa14.78□□□□□ -0.04
SCLT1-202ENST00000439369 CDKL5O76039 1030 aa14.78□□□□□ -0.04
SCLT1-202ENST00000439369 PARP1P09874 1014 aaKnown RBP14.78□□□□□ -0.04
SCLT1-202ENST00000439369 ZNF543Q08ER8 600 aa14.78□□□□□ -0.04
SCLT1-202ENST00000439369 MTMR2Q13614 643 aa14.78□□□□□ -0.04
SCLT1-202ENST00000439369 PROCA1Q8NCQ7 364 aaPredicted RBP14.78□□□□□ -0.04
SCLT1-202ENST00000439369 NUP133Q8WUM0 1156 aa14.78□□□□□ -0.04
SCLT1-202ENST00000439369 OTUD5Q96G74 571 aa14.78□□□□□ -0.04
SCLT1-202ENST00000439369 INTS4Q96HW7 963 aaKnown RBP14.78□□□□□ -0.04
SCLT1-202ENST00000439369 WNK4Q96J92 1243 aa14.78□□□□□ -0.04
SCLT1-202ENST00000439369 LLPHQ9BRT6 129 aaKnown RBP14.78□□□□□ -0.04
SCLT1-202ENST00000439369 TMOD4Q9NZQ9 345 aa14.78□□□□□ -0.04
SCLT1-202ENST00000439369 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.78□□□□□ -0.04
SCLT1-202ENST00000439369 NAP1L2Q9ULW6 460 aaPredicted RBP14.78□□□□□ -0.04
SCLT1-202ENST00000439369 A0A0G2JLL6 359 aaPredicted RBP14.77□□□□□ -0.05
SCLT1-202ENST00000439369 TRIM75PA6NK02 468 aa14.77□□□□□ -0.05
SCLT1-202ENST00000439369 BMP3P12645 472 aa14.77□□□□□ -0.05
SCLT1-202ENST00000439369 SLC1A4P43007 532 aa14.77□□□□□ -0.05
SCLT1-202ENST00000439369 SNAPC2Q13487 334 aa14.77□□□□□ -0.05
SCLT1-202ENST00000439369 SPRYD7Q5W111 196 aa14.77□□□□□ -0.05
SCLT1-202ENST00000439369 NOL8Q76FK4 1167 aaKnown RBP14.77□□□□□ -0.05
SCLT1-202ENST00000439369 FASTKD5Q7L8L6 764 aaKnown RBP14.77□□□□□ -0.05
SCLT1-202ENST00000439369 PRRT2Q7Z6L0 340 aaPredicted RBP14.77□□□□□ -0.05
SCLT1-202ENST00000439369 CCDC84Q86UT8 332 aaPredicted RBP14.77□□□□□ -0.05
SCLT1-202ENST00000439369 CCDC102AQ96A19 550 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 152.4 ms