RNA–Protein interactions for RNA: ENST00000439120.1

AC004540.1-201, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 891 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-201ENST00000439120 LRRFIP1Q32MZ4 808 aaKnown RBP22.14■■□□□ 1.13
AC004540.1-201ENST00000439120 ANKLE1Q8NAG6 615 aa22.14■■□□□ 1.13
AC004540.1-201ENST00000439120 LPAR1Q92633 364 aa22.14■■□□□ 1.13
AC004540.1-201ENST00000439120 PAWRQ96IZ0 340 aaKnown RBP22.14■■□□□ 1.13
AC004540.1-201ENST00000439120 ZFYP08048 801 aaPredicted RBP22.13■■□□□ 1.13
AC004540.1-201ENST00000439120 ATP2B2Q01814 1243 aa22.13■■□□□ 1.13
AC004540.1-201ENST00000439120 MAP2K5Q13163 448 aa22.13■■□□□ 1.13
AC004540.1-201ENST00000439120 CTR9Q6PD62 1173 aa22.13■■□□□ 1.13
AC004540.1-201ENST00000439120 CLEC10AQ8IUN9 316 aa22.13■■□□□ 1.13
AC004540.1-201ENST00000439120 APPBP2Q92624 585 aa22.13■■□□□ 1.13
AC004540.1-201ENST00000439120 USP6NLQ92738 828 aa22.13■■□□□ 1.13
AC004540.1-201ENST00000439120 BTBD7Q9P203 1132 aa22.13■■□□□ 1.13
AC004540.1-201ENST00000439120 ZBTB47Q9UFB7 747 aaPredicted RBP22.13■■□□□ 1.13
AC004540.1-201ENST00000439120 SLC15A5A6NIM6 579 aa22.12■■□□□ 1.13
AC004540.1-201ENST00000439120 ERC2O15083 957 aa22.12■■□□□ 1.13
AC004540.1-201ENST00000439120 RRP1P56182 461 aaKnown RBP22.12■■□□□ 1.13
AC004540.1-201ENST00000439120 SPICE1Q8N0Z3 855 aa22.12■■□□□ 1.13
AC004540.1-201ENST00000439120 STRBPQ96SI9 672 aaKnown RBP22.12■■□□□ 1.13
AC004540.1-201ENST00000439120 TMX2Q9Y320 296 aa22.12■■□□□ 1.13
AC004540.1-201ENST00000439120 RNF113AO15541 343 aaKnown RBP22.11■■□□□ 1.13
AC004540.1-201ENST00000439120 FLOT1O75955 427 aa22.11■■□□□ 1.13
AC004540.1-201ENST00000439120 PTPREP23469 700 aa22.11■■□□□ 1.13
AC004540.1-201ENST00000439120 CACNB2Q08289 660 aaPredicted RBP22.11■■□□□ 1.13
AC004540.1-201ENST00000439120 CCL14Q16627 93 aa22.11■■□□□ 1.13
AC004540.1-201ENST00000439120 MAP3K21Q5TCX8 1036 aa22.11■■□□□ 1.13
AC004540.1-201ENST00000439120 SAMD1Q6SPF0 538 aaPredicted RBP22.11■■□□□ 1.13
AC004540.1-201ENST00000439120 CHRDL2Q6WN34 429 aa22.11■■□□□ 1.13
AC004540.1-201ENST00000439120 VCPKMTQ9H867 229 aa22.11■■□□□ 1.13
AC004540.1-201ENST00000439120 KANSL2Q9H9L4 492 aa22.11■■□□□ 1.13
AC004540.1-201ENST00000439120 PCDHB15Q9Y5E8 787 aa22.11■■□□□ 1.13
AC004540.1-201ENST00000439120 TTC41PQ6P2S7 1318 aa22.1■■□□□ 1.13
AC004540.1-201ENST00000439120 SMIM22K7EJ46 135 aa22.1■■□□□ 1.13
AC004540.1-201ENST00000439120 MFSD14CQ5VZR4 134 aa22.1■■□□□ 1.13
AC004540.1-201ENST00000439120 MB21D1Q8N884 522 aa22.1■■□□□ 1.13
AC004540.1-201ENST00000439120 DIS3LQ8TF46 1054 aaKnown RBP22.1■■□□□ 1.13
AC004540.1-201ENST00000439120 NBPF3Q9H094 633 aa22.1■■□□□ 1.13
AC004540.1-201ENST00000439120 MINDY4BA8MYZ0 360 aa22.09■■□□□ 1.13
AC004540.1-201ENST00000439120 RAD21O60216 631 aa22.09■■□□□ 1.13
AC004540.1-201ENST00000439120 APPP05067 770 aa22.09■■□□□ 1.13
AC004540.1-201ENST00000439120 EEF2P13639 858 aaKnown RBP22.09■■□□□ 1.13
AC004540.1-201ENST00000439120 GNAT2P19087 354 aa22.09■■□□□ 1.13
AC004540.1-201ENST00000439120 TDO2P48775 406 aa22.09■■□□□ 1.13
AC004540.1-201ENST00000439120 PLS1Q14651 629 aa22.09■■□□□ 1.13
AC004540.1-201ENST00000439120 GIMAP6Q6P9H5 292 aa22.09■■□□□ 1.13
AC004540.1-201ENST00000439120 OSBP2Q969R2 916 aa22.09■■□□□ 1.13
AC004540.1-201ENST00000439120 MKNK2Q9HBH9 465 aa22.09■■□□□ 1.13
AC004540.1-201ENST00000439120 GOPCQ9HD26 462 aa22.09■■□□□ 1.13
AC004540.1-201ENST00000439120 GSG1L2A8MUP6 293 aa22.08■■□□□ 1.13
AC004540.1-201ENST00000439120 WDR46O15213 610 aaKnown RBP22.08■■□□□ 1.13
AC004540.1-201ENST00000439120 GPAA1O43292 621 aa22.08■■□□□ 1.13
AC004540.1-201ENST00000439120 GRB14Q14449 540 aa22.08■■□□□ 1.13
AC004540.1-201ENST00000439120 SBK1Q52WX2 424 aa22.08■■□□□ 1.13
AC004540.1-201ENST00000439120 KIAA1755Q5JYT7 1200 aa22.08■■□□□ 1.13
AC004540.1-201ENST00000439120 SIAH1Q8IUQ4 282 aa22.08■■□□□ 1.13
AC004540.1-201ENST00000439120 STK11IPQ8N1F8 1099 aa22.08■■□□□ 1.13
AC004540.1-201ENST00000439120 MOV10L1Q9BXT6 1211 aaKnown RBP22.08■■□□□ 1.13
AC004540.1-201ENST00000439120 SPATC1LQ9H0A9 340 aa22.08■■□□□ 1.13
AC004540.1-201ENST00000439120 OGDHLQ9ULD0 1010 aa22.08■■□□□ 1.13
AC004540.1-201ENST00000439120 A0A0G2JMZ2 1700 aa22.07■■□□□ 1.12
AC004540.1-201ENST00000439120 DSG3P32926 999 aa22.07■■□□□ 1.12
AC004540.1-201ENST00000439120 DPP9Q86TI2 863 aa22.07■■□□□ 1.12
AC004540.1-201ENST00000439120 FSD1Q9BTV5 496 aa22.07■■□□□ 1.12
AC004540.1-201ENST00000439120 C11orf49Q9H6J7 331 aa22.07■■□□□ 1.12
AC004540.1-201ENST00000439120 ZNF287Q9HBT7 754 aa22.07■■□□□ 1.12
AC004540.1-201ENST00000439120 PCDH10Q9P2E7 1040 aa22.07■■□□□ 1.12
AC004540.1-201ENST00000439120 STRNO43815 780 aa22.06■■□□□ 1.12
AC004540.1-201ENST00000439120 CCND3P30281 292 aaPredicted RBP22.06■■□□□ 1.12
AC004540.1-201ENST00000439120 SHCBP1Q8NEM2 672 aa22.06■■□□□ 1.12
AC004540.1-201ENST00000439120 ATG4CQ96DT6 458 aa22.06■■□□□ 1.12
AC004540.1-201ENST00000439120 CEP290O15078 2479 aa22.05■■□□□ 1.12
AC004540.1-201ENST00000439120 M0R2C6 588 aa22.05■■□□□ 1.12
AC004540.1-201ENST00000439120 HOXC6P09630 235 aa22.05■■□□□ 1.12
AC004540.1-201ENST00000439120 ERCC3P19447 782 aa22.05■■□□□ 1.12
AC004540.1-201ENST00000439120 MX1P20591 662 aa22.05■■□□□ 1.12
AC004540.1-201ENST00000439120 NCAPG2Q86XI2 1143 aa22.05■■□□□ 1.12
AC004540.1-201ENST00000439120 NACAP1Q9BZK3 213 aa22.05■■□□□ 1.12
AC004540.1-201ENST00000439120 MROH8Q9H579 483 aa22.05■■□□□ 1.12
AC004540.1-201ENST00000439120 SLC5A4Q9NY91 659 aa22.05■■□□□ 1.12
AC004540.1-201ENST00000439120 RLFQ13129 1914 aa22.05■■□□□ 1.12
AC004540.1-201ENST00000439120 ROBO3Q96MS0 1386 aa22.04■■□□□ 1.12
AC004540.1-201ENST00000439120 ADORA2AP29274 412 aa22.04■■□□□ 1.12
AC004540.1-201ENST00000439120 CNGA1P29973 690 aa22.04■■□□□ 1.12
AC004540.1-201ENST00000439120 FXR1P51114 621 aaKnown RBP eCLIP22.04■■□□□ 1.12
AC004540.1-201ENST00000439120 C7orf61Q8IZ16 206 aa22.04■■□□□ 1.12
AC004540.1-201ENST00000439120 PI4K2BQ8TCG2 481 aa22.04■■□□□ 1.12
AC004540.1-201ENST00000439120 YTHDC1Q96MU7 727 aaKnown RBP22.04■■□□□ 1.12
AC004540.1-201ENST00000439120 CRBNQ96SW2 442 aa22.04■■□□□ 1.12
AC004540.1-201ENST00000439120 FLRT1Q9NZU1 646 aa22.04■■□□□ 1.12
AC004540.1-201ENST00000439120 ZNF236Q9UL36 1845 aa22.03■■□□□ 1.12
AC004540.1-201ENST00000439120 RASA1P20936 1047 aa22.03■■□□□ 1.12
AC004540.1-201ENST00000439120 ZNF444Q8N0Y2 327 aaPredicted RBP22.03■■□□□ 1.12
AC004540.1-201ENST00000439120 NPLOC4Q8TAT6 608 aa22.03■■□□□ 1.12
AC004540.1-201ENST00000439120 OTUD7AQ8TE49 926 aaPredicted RBP22.03■■□□□ 1.12
AC004540.1-201ENST00000439120 EPB41L4AQ9HCS5 686 aaPredicted RBP22.03■■□□□ 1.12
AC004540.1-201ENST00000439120 RBM27Q9P2N5 1060 aaKnown RBP22.03■■□□□ 1.12
AC004540.1-201ENST00000439120 ALPK3Q96L96 1907 aa22.02■■□□□ 1.12
AC004540.1-201ENST00000439120 PARP14Q460N5 1801 aa22.02■■□□□ 1.12
AC004540.1-201ENST00000439120 PATL2C9JE40 543 aaKnown RBP22.02■■□□□ 1.12
AC004540.1-201ENST00000439120 CYP2C19P33261 490 aa22.02■■□□□ 1.12
AC004540.1-201ENST00000439120 ANKRD45Q5TZF3 282 aa22.02■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms