RNA–Protein interactions for RNA: ENST00000438796.6

LRCH3-206, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

APPRIS P5 TSL 2 BASIC

Gene LRCH3, Length 7,394 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-206ENST00000438796 MIPOL1Q8TD10 442 aa15.24■□□□□ 0.03
LRCH3-206ENST00000438796 LIG4P49917 911 aa15.24■□□□□ 0.03
LRCH3-206ENST00000438796 NONOQ15233 471 aaKnown RBP eCLIP15.24■□□□□ 0.03
LRCH3-206ENST00000438796 PARP10Q53GL7 1025 aa15.24■□□□□ 0.03
LRCH3-206ENST00000438796 PRR16Q569H4 304 aa15.24■□□□□ 0.03
LRCH3-206ENST00000438796 GBP7Q8N8V2 638 aaPredicted RBP15.24■□□□□ 0.03
LRCH3-206ENST00000438796 TECP42680 631 aa15.24■□□□□ 0.03
LRCH3-206ENST00000438796 SLC9C1Q4G0N8 1177 aa15.24■□□□□ 0.03
LRCH3-206ENST00000438796 ANKRD42Q8N9B4 389 aa15.24■□□□□ 0.03
LRCH3-206ENST00000438796 SLC5A4Q9NY91 659 aa15.24■□□□□ 0.03
LRCH3-206ENST00000438796 DLATP10515 647 aaKnown RBP15.23■□□□□ 0.03
LRCH3-206ENST00000438796 VPS41P49754 854 aa15.23■□□□□ 0.03
LRCH3-206ENST00000438796 DDX21Q9NR30 783 aaKnown RBP eCLIP15.23■□□□□ 0.03
LRCH3-206ENST00000438796 CUL7Q14999 1698 aa15.23■□□□□ 0.03
LRCH3-206ENST00000438796 SOS1Q07889 1333 aaPredicted RBP15.23■□□□□ 0.03
LRCH3-206ENST00000438796 FOXD4Q12950 439 aaPredicted RBP15.23■□□□□ 0.03
LRCH3-206ENST00000438796 PPFIA1Q13136 1202 aa15.23■□□□□ 0.03
LRCH3-206ENST00000438796 KRBA2Q6ZNG9 492 aa15.23■□□□□ 0.03
LRCH3-206ENST00000438796 SND1Q7KZF4 910 aaKnown RBP eCLIP15.23■□□□□ 0.03
LRCH3-206ENST00000438796 ANKRD35Q8N283 1001 aa15.23■□□□□ 0.03
LRCH3-206ENST00000438796 NME8Q8N427 588 aa15.23■□□□□ 0.03
LRCH3-206ENST00000438796 TMEM87BQ96K49 555 aa15.23■□□□□ 0.03
LRCH3-206ENST00000438796 FAM207AQ9NSI2 230 aaPredicted RBP15.23■□□□□ 0.03
LRCH3-206ENST00000438796 STK25O00506 426 aa15.23■□□□□ 0.03
LRCH3-206ENST00000438796 KLHL30Q0D2K2 578 aa15.23■□□□□ 0.03
LRCH3-206ENST00000438796 SECISBP2LQ93073 1101 aaKnown RBP15.23■□□□□ 0.03
LRCH3-206ENST00000438796 FAM114A2Q9NRY5 505 aa15.23■□□□□ 0.03
LRCH3-206ENST00000438796 U2AF2P26368 475 aaKnown RBP eCLIP15.23■□□□□ 0.032e-7■■■■□ 23.5
LRCH3-206ENST00000438796 PALM2Q8IXS6 379 aa15.23■□□□□ 0.03
LRCH3-206ENST00000438796 DIS3L2Q8IYB7 885 aaKnown RBP15.23■□□□□ 0.03
LRCH3-206ENST00000438796 AFAP1L1Q8TED9 768 aa15.23■□□□□ 0.03
LRCH3-206ENST00000438796 CASQ2O14958 399 aaPredicted RBP15.23■□□□□ 0.03
LRCH3-206ENST00000438796 CASP2P42575 452 aa15.23■□□□□ 0.03
LRCH3-206ENST00000438796 PPP1R16BQ96T49 567 aa15.23■□□□□ 0.03
LRCH3-206ENST00000438796 SPDYE2BA6NHP3 402 aa15.22■□□□□ 0.03
LRCH3-206ENST00000438796 STAM2O75886 525 aa15.22■□□□□ 0.03
LRCH3-206ENST00000438796 SPDYE6P0CI01 402 aa15.22■□□□□ 0.03
LRCH3-206ENST00000438796 MFSD14BQ5SR56 506 aa15.22■□□□□ 0.03
LRCH3-206ENST00000438796 RRAGAQ7L523 313 aa15.22■□□□□ 0.03
LRCH3-206ENST00000438796 IP6K1Q92551 441 aa15.22■□□□□ 0.03
LRCH3-206ENST00000438796 KRT12Q99456 494 aa15.22■□□□□ 0.03
LRCH3-206ENST00000438796 AS3MTQ9HBK9 375 aa15.22■□□□□ 0.03
LRCH3-206ENST00000438796 SMCO2A6NFE2 343 aa15.22■□□□□ 0.03
LRCH3-206ENST00000438796 ARPP19P56211 112 aa15.22■□□□□ 0.03
LRCH3-206ENST00000438796 U2AF1L4Q8WU68 220 aaKnown RBP15.22■□□□□ 0.03
LRCH3-206ENST00000438796 KDRP35968 1356 aa15.22■□□□□ 0.03
LRCH3-206ENST00000438796 IFNB1P01574 187 aa15.22■□□□□ 0.03
LRCH3-206ENST00000438796 C2CD5Q86YS7 1000 aa15.22■□□□□ 0.03
LRCH3-206ENST00000438796 GSTA1P08263 222 aa15.22■□□□□ 0.03
LRCH3-206ENST00000438796 GSTA2P09210 222 aa15.22■□□□□ 0.03
LRCH3-206ENST00000438796 ATF7P17544 494 aaPredicted RBP15.22■□□□□ 0.03
LRCH3-206ENST00000438796 IL1RL1Q01638 556 aa15.22■□□□□ 0.03
LRCH3-206ENST00000438796 XKR9Q5GH70 373 aa15.22■□□□□ 0.03
LRCH3-206ENST00000438796 PEX26Q7Z412 305 aa15.22■□□□□ 0.03
LRCH3-206ENST00000438796 OTUD7AQ8TE49 926 aaPredicted RBP15.22■□□□□ 0.03
LRCH3-206ENST00000438796 APPBP2Q92624 585 aa15.22■□□□□ 0.03
LRCH3-206ENST00000438796 SPATA17Q96L03 361 aa15.22■□□□□ 0.03
LRCH3-206ENST00000438796 GOLGA8HP0CJ92 632 aa15.22■□□□□ 0.03
LRCH3-206ENST00000438796 KCNA6P17658 529 aa15.22■□□□□ 0.03
LRCH3-206ENST00000438796 SFMBT2Q5VUG0 894 aa15.22■□□□□ 0.03
LRCH3-206ENST00000438796 CEP128Q6ZU80 1094 aa15.22■□□□□ 0.03
LRCH3-206ENST00000438796 RLBP1P12271 317 aa15.22■□□□□ 0.03
LRCH3-206ENST00000438796 GPBP1Q86WP2 473 aa15.22■□□□□ 0.03
LRCH3-206ENST00000438796 ORAI2Q96SN7 254 aa15.22■□□□□ 0.03
LRCH3-206ENST00000438796 VAMP4O75379 141 aa15.21■□□□□ 0.03
LRCH3-206ENST00000438796 GBP1P32455 592 aa15.21■□□□□ 0.03
LRCH3-206ENST00000438796 BAG6P46379 1132 aa15.21■□□□□ 0.03
LRCH3-206ENST00000438796 LONRF2Q1L5Z9 754 aa15.21■□□□□ 0.03
LRCH3-206ENST00000438796 K7ENM7 598 aa15.21■□□□□ 0.03
LRCH3-206ENST00000438796 TEKT1Q969V4 418 aa15.21■□□□□ 0.03
LRCH3-206ENST00000438796 SUCLG2Q96I99 432 aa15.21■□□□□ 0.03
LRCH3-206ENST00000438796 STK38LQ9Y2H1 464 aa15.21■□□□□ 0.03
LRCH3-206ENST00000438796 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.21■□□□□ 0.03
LRCH3-206ENST00000438796 RFC1P35251 1148 aaPredicted RBP15.21■□□□□ 0.03
LRCH3-206ENST00000438796 FANCCQ00597 558 aa15.21■□□□□ 0.03
LRCH3-206ENST00000438796 PNOCQ13519 176 aa15.21■□□□□ 0.03
LRCH3-206ENST00000438796 SDR42E1Q8WUS8 393 aa15.21■□□□□ 0.03
LRCH3-206ENST00000438796 GDAP1L1Q96MZ0 367 aa15.21■□□□□ 0.03
LRCH3-206ENST00000438796 TRIM56Q9BRZ2 755 aaKnown RBP15.21■□□□□ 0.03
LRCH3-206ENST00000438796 IFT20Q8IY31 132 aa15.21■□□□□ 0.03
LRCH3-206ENST00000438796 VCX3BQ9H321 246 aa15.21■□□□□ 0.03
LRCH3-206ENST00000438796 KIF3CO14782 793 aa15.21■□□□□ 0.02
LRCH3-206ENST00000438796 LPIN2Q92539 896 aa15.21■□□□□ 0.02
LRCH3-206ENST00000438796 SWAP70Q9UH65 585 aa15.21■□□□□ 0.02
LRCH3-206ENST00000438796 CLRN2A0PK11 232 aa15.2■□□□□ 0.02
LRCH3-206ENST00000438796 CLGNO14967 610 aa15.2■□□□□ 0.02
LRCH3-206ENST00000438796 BUB1BO60566 1050 aaPredicted RBP15.2■□□□□ 0.02
LRCH3-206ENST00000438796 POLA2Q14181 598 aa15.2■□□□□ 0.02
LRCH3-206ENST00000438796 TAOK1Q7L7X3 1001 aa15.2■□□□□ 0.02
LRCH3-206ENST00000438796 KRT25Q7Z3Z0 450 aa15.2■□□□□ 0.02
LRCH3-206ENST00000438796 DNAJC10Q8IXB1 793 aa15.2■□□□□ 0.02
LRCH3-206ENST00000438796 PDE6BP35913 854 aa15.2■□□□□ 0.02
LRCH3-206ENST00000438796 POSTNQ15063 836 aa15.2■□□□□ 0.02
LRCH3-206ENST00000438796 SULF1Q8IWU6 871 aa15.2■□□□□ 0.02
LRCH3-206ENST00000438796 SLF1Q9BQI6 1058 aa15.2■□□□□ 0.02
LRCH3-206ENST00000438796 SMYD2Q9NRG4 433 aa15.2■□□□□ 0.02
LRCH3-206ENST00000438796 FNDC3AQ9Y2H6 1198 aaKnown RBP15.2■□□□□ 0.02
LRCH3-206ENST00000438796 URB2Q14146 1524 aaKnown RBP15.2■□□□□ 0.02
LRCH3-206ENST00000438796 LRRIQ4A6NIV6 560 aa15.2■□□□□ 0.02
LRCH3-206ENST00000438796 ZNF202O95125 648 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 94.8 ms