RNA–Protein interactions for RNA: ENST00000438462.1

RTN4-211, Transcript of reticulon 4, humanhuman

TSL 5

Gene RTN4, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-211ENST00000438462 RFX7Q2KHR2 1363 aa14.21□□□□□ -0.14
RTN4-211ENST00000438462 ANKRD11Q6UB99 2663 aaPredicted RBP14.2□□□□□ -0.14
RTN4-211ENST00000438462 UMODL1Q5DID0 1318 aa14.2□□□□□ -0.14
RTN4-211ENST00000438462 CNMDO75829 334 aa14.2□□□□□ -0.14
RTN4-211ENST00000438462 ACLYP53396 1101 aa14.2□□□□□ -0.14
RTN4-211ENST00000438462 DIXDC1Q155Q3 683 aa14.2□□□□□ -0.14
RTN4-211ENST00000438462 VPS37DQ86XT2 251 aa14.2□□□□□ -0.14
RTN4-211ENST00000438462 RNF135Q8IUD6 432 aa14.2□□□□□ -0.14
RTN4-211ENST00000438462 NUP133Q8WUM0 1156 aa14.2□□□□□ -0.14
RTN4-211ENST00000438462 SUGT1Q9Y2Z0 365 aa14.2□□□□□ -0.14
RTN4-211ENST00000438462 H7C1W4 665 aa14.19□□□□□ -0.14
RTN4-211ENST00000438462 UBE4AQ14139 1066 aa14.19□□□□□ -0.14
RTN4-211ENST00000438462 PUM1Q14671 1186 aaKnown RBP eCLIP14.19□□□□□ -0.14
RTN4-211ENST00000438462 DPP9Q86TI2 863 aa14.19□□□□□ -0.14
RTN4-211ENST00000438462 LENG1Q96BZ8 264 aaPredicted RBP14.19□□□□□ -0.14
RTN4-211ENST00000438462 FAM50BQ9Y247 325 aa14.19□□□□□ -0.14
RTN4-211ENST00000438462 FASNP49327 2511 aaKnown RBP14.18□□□□□ -0.14
RTN4-211ENST00000438462 MAPK8IP3Q9UPT6 1336 aa14.18□□□□□ -0.14
RTN4-211ENST00000438462 USP17L5A8MUK1 530 aa14.18□□□□□ -0.14
RTN4-211ENST00000438462 ENTPD3O75355 529 aa14.18□□□□□ -0.14
RTN4-211ENST00000438462 AVPR2P30518 371 aa14.18□□□□□ -0.14
RTN4-211ENST00000438462 IFIT5Q13325 482 aaKnown RBP14.18□□□□□ -0.14
RTN4-211ENST00000438462 FRMD5Q7Z6J6 570 aa14.18□□□□□ -0.14
RTN4-211ENST00000438462 FAM126BQ8IXS8 530 aa14.18□□□□□ -0.14
RTN4-211ENST00000438462 OSBPL5Q9H0X9 879 aaPredicted RBP14.18□□□□□ -0.14
RTN4-211ENST00000438462 AS3MTQ9HBK9 375 aa14.18□□□□□ -0.14
RTN4-211ENST00000438462 NEURL1BA8MQ27 555 aa14.17□□□□□ -0.14
RTN4-211ENST00000438462 ADAMTS4O75173 837 aa14.17□□□□□ -0.14
RTN4-211ENST00000438462 DDX58O95786 925 aaKnown RBP14.17□□□□□ -0.14
RTN4-211ENST00000438462 ADORA2AP29274 412 aa14.17□□□□□ -0.14
RTN4-211ENST00000438462 CDK7P50613 346 aa14.17□□□□□ -0.14
RTN4-211ENST00000438462 CCL23P55773 120 aa14.17□□□□□ -0.14
RTN4-211ENST00000438462 BACE1P56817 501 aa14.17□□□□□ -0.14
RTN4-211ENST00000438462 ZNF594Q96JF6 807 aaPredicted RBP14.17□□□□□ -0.14
RTN4-211ENST00000438462 TSEN34Q9BSV6 310 aaKnown RBP14.17□□□□□ -0.14
RTN4-211ENST00000438462 CNNM1Q9NRU3 951 aa14.17□□□□□ -0.14
RTN4-211ENST00000438462 RABGAP1Q9Y3P9 1069 aa14.17□□□□□ -0.14
RTN4-211ENST00000438462 FAM208BQ5VWN6 2430 aa14.17□□□□□ -0.14
RTN4-211ENST00000438462 TLR3O15455 904 aaKnown RBP14.16□□□□□ -0.14
RTN4-211ENST00000438462 DUSP27Q5VZP5 1158 aa14.16□□□□□ -0.14
RTN4-211ENST00000438462 FBXO33Q7Z6M2 555 aa14.16□□□□□ -0.14
RTN4-211ENST00000438462 HIPK3Q9H422 1215 aa14.16□□□□□ -0.14
RTN4-211ENST00000438462 CHMP3Q9Y3E7 222 aa14.16□□□□□ -0.14
RTN4-211ENST00000438462 LAS1LQ9Y4W2 734 aaKnown RBP14.16□□□□□ -0.14
RTN4-211ENST00000438462 ROBO3Q96MS0 1386 aa14.16□□□□□ -0.14
RTN4-211ENST00000438462 ZNF292O60281 2723 aa14.16□□□□□ -0.14
RTN4-211ENST00000438462 GPR179Q6PRD1 2367 aa14.16□□□□□ -0.14
RTN4-211ENST00000438462 MOXD2PA6NHM9 499 aa14.15□□□□□ -0.14
RTN4-211ENST00000438462 CHL1O00533 1208 aa14.15□□□□□ -0.14
RTN4-211ENST00000438462 GALR2O43603 387 aaPredicted RBP14.15□□□□□ -0.14
RTN4-211ENST00000438462 GCKRQ14397 625 aa14.15□□□□□ -0.14
RTN4-211ENST00000438462 TTLL4Q14679 1199 aa14.15□□□□□ -0.14
RTN4-211ENST00000438462 LDHAL6AQ6ZMR3 332 aa14.15□□□□□ -0.14
RTN4-211ENST00000438462 POP1Q99575 1024 aaKnown RBP14.15□□□□□ -0.14
RTN4-211ENST00000438462 IDI2Q9BXS1 227 aa14.15□□□□□ -0.14
RTN4-211ENST00000438462 COL11A1P12107 1806 aaPredicted RBP14.15□□□□□ -0.14
RTN4-211ENST00000438462 SIP14410 1827 aa14.15□□□□□ -0.14
RTN4-211ENST00000438462 PTPRSQ13332 1948 aa14.14□□□□□ -0.15
RTN4-211ENST00000438462 CASP7P55210 303 aa14.14□□□□□ -0.15
RTN4-211ENST00000438462 RIPK4P57078 832 aa14.14□□□□□ -0.15
RTN4-211ENST00000438462 NEXNQ0ZGT2 675 aa14.14□□□□□ -0.15
RTN4-211ENST00000438462 RRP1BQ14684 758 aaKnown RBP14.14□□□□□ -0.15
RTN4-211ENST00000438462 MCTP2Q6DN12 878 aa14.14□□□□□ -0.15
RTN4-211ENST00000438462 VWCEQ96DN2 955 aa14.14□□□□□ -0.15
RTN4-211ENST00000438462 GLT1D1Q96MS3 346 aa14.14□□□□□ -0.15
RTN4-211ENST00000438462 SLC9A7Q96T83 725 aa14.14□□□□□ -0.15
RTN4-211ENST00000438462 WNT8AQ9H1J5 351 aa14.14□□□□□ -0.15
RTN4-211ENST00000438462 SYNRGQ9UMZ2 1314 aa14.14□□□□□ -0.15
RTN4-211ENST00000438462 CAP2P40123 477 aa14.13□□□□□ -0.15
RTN4-211ENST00000438462 ZXDAP98168 799 aa14.13□□□□□ -0.15
RTN4-211ENST00000438462 PICALMQ13492 652 aa14.13□□□□□ -0.15
RTN4-211ENST00000438462 DDX4Q9NQI0 724 aaKnown RBP14.13□□□□□ -0.15
RTN4-211ENST00000438462 SH2B1Q9NRF2 756 aaPredicted RBP14.13□□□□□ -0.15
RTN4-211ENST00000438462 IGSF5Q9NSI5 407 aa14.13□□□□□ -0.15
RTN4-211ENST00000438462 MTUS1Q9ULD2 1270 aa14.13□□□□□ -0.15
RTN4-211ENST00000438462 ELP1O95163 1332 aa14.13□□□□□ -0.15
RTN4-211ENST00000438462 A0A0U1RQG5 324 aaPredicted RBP14.12□□□□□ -0.15
RTN4-211ENST00000438462 ARVCFO00192 962 aa14.12□□□□□ -0.15
RTN4-211ENST00000438462 TBC1D12O60347 775 aa14.12□□□□□ -0.15
RTN4-211ENST00000438462 COBLO75128 1261 aa14.12□□□□□ -0.15
RTN4-211ENST00000438462 CD4P01730 458 aa14.12□□□□□ -0.15
RTN4-211ENST00000438462 KCNA10Q16322 511 aa14.12□□□□□ -0.15
RTN4-211ENST00000438462 TAF7LQ5H9L4 462 aa14.12□□□□□ -0.15
RTN4-211ENST00000438462 EP400NLQ6ZTU2 488 aa14.12□□□□□ -0.15
RTN4-211ENST00000438462 KIAA2013Q8IYS2 634 aa14.12□□□□□ -0.15
RTN4-211ENST00000438462 RPUSD2Q8IZ73 545 aaKnown RBP14.12□□□□□ -0.15
RTN4-211ENST00000438462 WDR18Q9BV38 432 aa14.12□□□□□ -0.15
RTN4-211ENST00000438462 BTBD7Q9P203 1132 aa14.12□□□□□ -0.15
RTN4-211ENST00000438462 TIMELESSQ9UNS1 1208 aa14.12□□□□□ -0.15
RTN4-211ENST00000438462 MYH2Q9UKX2 1941 aa14.11□□□□□ -0.15
RTN4-211ENST00000438462 LCHNA4D1U4 455 aa14.11□□□□□ -0.15
RTN4-211ENST00000438462 PI4KAP2A4QPH2 592 aa14.11□□□□□ -0.15
RTN4-211ENST00000438462 MYADML2A6NDP7 307 aa14.11□□□□□ -0.15
RTN4-211ENST00000438462 NUBP1P53384 320 aa14.11□□□□□ -0.15
RTN4-211ENST00000438462 CAVIN4Q5BKX8 364 aa14.11□□□□□ -0.15
RTN4-211ENST00000438462 CCSAPQ6IQ19 270 aaPredicted RBP14.11□□□□□ -0.15
RTN4-211ENST00000438462 HERC6Q8IVU3 1022 aa14.11□□□□□ -0.15
RTN4-211ENST00000438462 PI4KAP1Q8N8J0 262 aa14.11□□□□□ -0.15
RTN4-211ENST00000438462 SCLYQ96I15 445 aa14.11□□□□□ -0.15
RTN4-211ENST00000438462 SUGCTQ9HAC7 445 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms