RNA–Protein interactions for RNA: ENST00000437100.5

CPNE1-215, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 826 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-215ENST00000437100 CCDC178Q5BJE1 867 aa17.4■□□□□ 0.38
CPNE1-215ENST00000437100 TREML2Q5T2D2 321 aa17.4■□□□□ 0.38
CPNE1-215ENST00000437100 DGKHQ86XP1 1220 aa17.4■□□□□ 0.38
CPNE1-215ENST00000437100 ENAHQ8N8S7 591 aaPredicted RBP17.4■□□□□ 0.38
CPNE1-215ENST00000437100 GMCL1P1Q8NEA9 526 aa17.4■□□□□ 0.38
CPNE1-215ENST00000437100 LPAR1Q92633 364 aa17.4■□□□□ 0.38
CPNE1-215ENST00000437100 TTC14Q96N46 770 aa17.4■□□□□ 0.38
CPNE1-215ENST00000437100 TNKSO95271 1327 aa17.4■□□□□ 0.38
CPNE1-215ENST00000437100 TOP1P11387 765 aaKnown RBP17.39■□□□□ 0.37
CPNE1-215ENST00000437100 VCAM1P19320 739 aa17.39■□□□□ 0.37
CPNE1-215ENST00000437100 MCCP23508 829 aa17.39■□□□□ 0.37
CPNE1-215ENST00000437100 ANAPC15P60006 121 aa17.39■□□□□ 0.37
CPNE1-215ENST00000437100 MAP2K1Q02750 393 aaPredicted RBP17.39■□□□□ 0.37
CPNE1-215ENST00000437100 ZYXQ15942 572 aaKnown RBP17.39■□□□□ 0.37
CPNE1-215ENST00000437100 LRRC47Q8N1G4 583 aaKnown RBP17.39■□□□□ 0.37
CPNE1-215ENST00000437100 NEK1Q96PY6 1258 aa17.39■□□□□ 0.37
CPNE1-215ENST00000437100 TMEM47Q9BQJ4 181 aa17.39■□□□□ 0.37
CPNE1-215ENST00000437100 ZKSCAN3Q9BRR0 538 aa17.39■□□□□ 0.37
CPNE1-215ENST00000437100 CFHR5Q9BXR6 569 aa17.39■□□□□ 0.37
CPNE1-215ENST00000437100 WBP1LQ9NX94 342 aa17.39■□□□□ 0.37
CPNE1-215ENST00000437100 TMOD4Q9NZQ9 345 aa17.39■□□□□ 0.37
CPNE1-215ENST00000437100 STX8Q9UNK0 236 aa17.39■□□□□ 0.37
CPNE1-215ENST00000437100 WDR19Q8NEZ3 1342 aa17.39■□□□□ 0.37
CPNE1-215ENST00000437100 NDUFB10O96000 172 aa17.38■□□□□ 0.37
CPNE1-215ENST00000437100 HOXA7P31268 230 aaPredicted RBP17.38■□□□□ 0.37
CPNE1-215ENST00000437100 MCM5P33992 734 aa17.38■□□□□ 0.37
CPNE1-215ENST00000437100 EXOSC10Q01780 885 aaKnown RBP17.38■□□□□ 0.37
CPNE1-215ENST00000437100 ATP2B2Q01814 1243 aa17.38■□□□□ 0.37
CPNE1-215ENST00000437100 GADL1Q6ZQY3 521 aa17.38■□□□□ 0.37
CPNE1-215ENST00000437100 IGDCC4Q8TDY8 1250 aa17.38■□□□□ 0.37
CPNE1-215ENST00000437100 UBAC1Q9BSL1 405 aa17.38■□□□□ 0.37
CPNE1-215ENST00000437100 GOPCQ9HD26 462 aa17.38■□□□□ 0.37
CPNE1-215ENST00000437100 PCNTO95613 3336 aa17.38■□□□□ 0.37
CPNE1-215ENST00000437100 F5H6K3 240 aa17.37■□□□□ 0.37
CPNE1-215ENST00000437100 PDHXO00330 501 aa17.37■□□□□ 0.37
CPNE1-215ENST00000437100 PRC1O43663 620 aa17.37■□□□□ 0.37
CPNE1-215ENST00000437100 ALDH1A1P00352 501 aa17.37■□□□□ 0.37
CPNE1-215ENST00000437100 KLRC3Q07444 240 aa17.37■□□□□ 0.37
CPNE1-215ENST00000437100 CHST3Q7LGC8 479 aa17.37■□□□□ 0.37
CPNE1-215ENST00000437100 BACH2Q9BYV9 841 aa17.37■□□□□ 0.37
CPNE1-215ENST00000437100 TM6SF1Q9BZW5 370 aa17.37■□□□□ 0.37
CPNE1-215ENST00000437100 RNF186Q9NXI6 227 aa17.37■□□□□ 0.37
CPNE1-215ENST00000437100 SAGE1Q9NXZ1 904 aa17.37■□□□□ 0.37
CPNE1-215ENST00000437100 ADGRA2Q96PE1 1338 aa17.37■□□□□ 0.37
CPNE1-215ENST00000437100 SH2B2O14492 632 aaPredicted RBP17.36■□□□□ 0.37
CPNE1-215ENST00000437100 WDR46O15213 610 aaKnown RBP17.36■□□□□ 0.37
CPNE1-215ENST00000437100 HMGB1P09429 215 aaKnown RBP17.36■□□□□ 0.37
CPNE1-215ENST00000437100 SNHG28P0DPA3 235 aa17.36■□□□□ 0.37
CPNE1-215ENST00000437100 OTUD7BQ6GQQ9 843 aa17.36■□□□□ 0.37
CPNE1-215ENST00000437100 DHX32Q7L7V1 743 aaKnown RBP17.36■□□□□ 0.37
CPNE1-215ENST00000437100 GMCL1Q96IK5 515 aa17.36■□□□□ 0.37
CPNE1-215ENST00000437100 TMEM87BQ96K49 555 aa17.36■□□□□ 0.37
CPNE1-215ENST00000437100 JAKMIP1Q96N16 626 aaKnown RBP17.36■□□□□ 0.37
CPNE1-215ENST00000437100 LY9Q9HBG7 655 aa17.36■□□□□ 0.37
CPNE1-215ENST00000437100 ZSWIM6Q9HCJ5 1215 aa17.36■□□□□ 0.37
CPNE1-215ENST00000437100 IFIT3O14879 490 aaKnown RBP17.35■□□□□ 0.37
CPNE1-215ENST00000437100 CA12O43570 354 aa17.35■□□□□ 0.37
CPNE1-215ENST00000437100 PSMA5P28066 241 aa17.35■□□□□ 0.37
CPNE1-215ENST00000437100 CATSPERGQ6ZRH7 1159 aa17.35■□□□□ 0.37
CPNE1-215ENST00000437100 SPICE1Q8N0Z3 855 aa17.35■□□□□ 0.37
CPNE1-215ENST00000437100 FBXL16Q8N461 479 aa17.35■□□□□ 0.37
CPNE1-215ENST00000437100 RPAP3Q9H6T3 665 aaPredicted RBP17.35■□□□□ 0.37
CPNE1-215ENST00000437100 SENP2Q9HC62 589 aa17.35■□□□□ 0.37
CPNE1-215ENST00000437100 GPHNQ9NQX3 736 aaPredicted RBP17.35■□□□□ 0.37
CPNE1-215ENST00000437100 USP17L15C9J2P7 530 aa17.34■□□□□ 0.37
CPNE1-215ENST00000437100 USP17L13C9JLJ4 530 aa17.34■□□□□ 0.37
CPNE1-215ENST00000437100 USP17L11C9JVI0 530 aa17.34■□□□□ 0.37
CPNE1-215ENST00000437100 USP17L18D6R9N7 530 aa17.34■□□□□ 0.37
CPNE1-215ENST00000437100 USP17L22D6RA61 530 aa17.34■□□□□ 0.37
CPNE1-215ENST00000437100 USP17L17D6RBQ6 530 aa17.34■□□□□ 0.37
CPNE1-215ENST00000437100 USP17L19D6RCP7 530 aa17.34■□□□□ 0.37
CPNE1-215ENST00000437100 USP17L20D6RJB6 530 aa17.34■□□□□ 0.37
CPNE1-215ENST00000437100 PDHBP11177 359 aa17.34■□□□□ 0.37
CPNE1-215ENST00000437100 RPS6KB1P23443 525 aa17.34■□□□□ 0.37
CPNE1-215ENST00000437100 LIFRP42702 1097 aa17.34■□□□□ 0.37
CPNE1-215ENST00000437100 RBM25P49756 843 aaKnown RBP17.34■□□□□ 0.37
CPNE1-215ENST00000437100 USP17L24Q0WX57 530 aa17.34■□□□□ 0.37
CPNE1-215ENST00000437100 PABPC4Q13310 644 aaKnown RBP eCLIP17.34■□□□□ 0.37
CPNE1-215ENST00000437100 SART3Q15020 963 aaKnown RBP17.34■□□□□ 0.37
CPNE1-215ENST00000437100 TMEM67Q5HYA8 995 aa17.34■□□□□ 0.37
CPNE1-215ENST00000437100 IFIT1BQ5T764 474 aaKnown RBP17.34■□□□□ 0.37
CPNE1-215ENST00000437100 SLFN13Q68D06 897 aa17.34■□□□□ 0.37
CPNE1-215ENST00000437100 RASGRP2Q7LDG7 609 aa17.34■□□□□ 0.37
CPNE1-215ENST00000437100 PARK7Q99497 189 aaKnown RBP17.34■□□□□ 0.37
CPNE1-215ENST00000437100 AGXT2Q9BYV1 514 aa17.34■□□□□ 0.37
CPNE1-215ENST00000437100 ASCC2Q9H1I8 757 aaPredicted RBP17.34■□□□□ 0.37
CPNE1-215ENST00000437100 MYH4Q9Y623 1939 aa17.33■□□□□ 0.37
CPNE1-215ENST00000437100 CYP2C8P10632 490 aa17.33■□□□□ 0.36
CPNE1-215ENST00000437100 CPA1P15085 419 aa17.33■□□□□ 0.36
CPNE1-215ENST00000437100 CASTP20810 708 aaKnown RBP17.33■□□□□ 0.36
CPNE1-215ENST00000437100 CRHR2Q13324 411 aa17.33■□□□□ 0.36
CPNE1-215ENST00000437100 WTAPQ15007 396 aa17.33■□□□□ 0.36
CPNE1-215ENST00000437100 FAM83BQ5T0W9 1011 aa17.33■□□□□ 0.36
CPNE1-215ENST00000437100 BLOC1S2Q6QNY1 142 aa17.33■□□□□ 0.36
CPNE1-215ENST00000437100 POTEEQ6S8J3 1075 aa17.33■□□□□ 0.36
CPNE1-215ENST00000437100 LBX2Q6XYB7 198 aa17.33■□□□□ 0.36
CPNE1-215ENST00000437100 PNMA1Q8ND90 353 aa17.33■□□□□ 0.36
CPNE1-215ENST00000437100 DCAF4Q8WV16 495 aa17.33■□□□□ 0.36
CPNE1-215ENST00000437100 NUP88Q99567 741 aaPredicted RBP17.33■□□□□ 0.36
CPNE1-215ENST00000437100 R3HDMLQ9H3Y0 253 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms