RNA–Protein interactions for RNA: ENST00000433218.6

HOMER3-203, Transcript of homer scaffold protein 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene HOMER3, Length 1,418 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-203ENST00000433218 USP17L21D6R901 530 aa27.32■■□□□ 1.96
HOMER3-203ENST00000433218 ZKSCAN1P17029 563 aaPredicted RBP27.32■■□□□ 1.96
HOMER3-203ENST00000433218 WDR78Q5VTH9 848 aa27.32■■□□□ 1.96
HOMER3-203ENST00000433218 SPICE1Q8N0Z3 855 aa27.32■■□□□ 1.96
HOMER3-203ENST00000433218 OTUD7AQ8TE49 926 aaPredicted RBP27.32■■□□□ 1.96
HOMER3-203ENST00000433218 GTF3C2Q8WUA4 911 aaPredicted RBP27.32■■□□□ 1.96
HOMER3-203ENST00000433218 APBA2Q99767 749 aa27.32■■□□□ 1.96
HOMER3-203ENST00000433218 HMX1Q9NP08 348 aaPredicted RBP27.32■■□□□ 1.96
HOMER3-203ENST00000433218 ATP8A2Q9NTI2 1148 aa27.32■■□□□ 1.96
HOMER3-203ENST00000433218 PCDHB15Q9Y5E8 787 aa27.32■■□□□ 1.96
HOMER3-203ENST00000433218 SLC4A4Q9Y6R1 1079 aa27.32■■□□□ 1.96
HOMER3-203ENST00000433218 CDK8P49336 464 aa27.31■■□□□ 1.96
HOMER3-203ENST00000433218 LBX2Q6XYB7 198 aa27.31■■□□□ 1.96
HOMER3-203ENST00000433218 TMEM179Q6ZVK1 233 aa27.31■■□□□ 1.96
HOMER3-203ENST00000433218 DCTPP1Q9H773 170 aa27.31■■□□□ 1.96
HOMER3-203ENST00000433218 ECHDC1Q9NTX5 307 aa27.31■■□□□ 1.96
HOMER3-203ENST00000433218 COL6A3P12111 3177 aa27.3■■□□□ 1.96
HOMER3-203ENST00000433218 XRCC5P13010 732 aaKnown RBP27.3■■□□□ 1.96
HOMER3-203ENST00000433218 ICA1Q05084 483 aa27.3■■□□□ 1.96
HOMER3-203ENST00000433218 TANGO6Q9C0B7 1094 aa27.3■■□□□ 1.96
HOMER3-203ENST00000433218 RGS2P41220 211 aa27.29■■□□□ 1.96
HOMER3-203ENST00000433218 CTR9Q6PD62 1173 aa27.29■■□□□ 1.96
HOMER3-203ENST00000433218 C16orf86Q6ZW13 317 aa27.29■■□□□ 1.96
HOMER3-203ENST00000433218 CRBNQ96SW2 442 aa27.29■■□□□ 1.96
HOMER3-203ENST00000433218 PRO3102Q9H379 93 aa27.29■■□□□ 1.96
HOMER3-203ENST00000433218 SWAP70Q9UH65 585 aa27.29■■□□□ 1.96
HOMER3-203ENST00000433218 PFASO15067 1338 aa27.28■■□□□ 1.96
HOMER3-203ENST00000433218 CCAR1Q8IX12 1150 aaKnown RBP27.28■■□□□ 1.96
HOMER3-203ENST00000433218 STK11IPQ8N1F8 1099 aa27.28■■□□□ 1.96
HOMER3-203ENST00000433218 NPLOC4Q8TAT6 608 aa27.28■■□□□ 1.96
HOMER3-203ENST00000433218 OSBP2Q969R2 916 aa27.28■■□□□ 1.96
HOMER3-203ENST00000433218 EPB41L4AQ9HCS5 686 aaPredicted RBP27.28■■□□□ 1.96
HOMER3-203ENST00000433218 SMCHD1A6NHR9 2005 aa27.28■■□□□ 1.96
HOMER3-203ENST00000433218 MAP2K5Q13163 448 aa27.27■■□□□ 1.96
HOMER3-203ENST00000433218 M0R2C6 588 aa27.26■■□□□ 1.95
HOMER3-203ENST00000433218 PTPREP23469 700 aa27.26■■□□□ 1.95
HOMER3-203ENST00000433218 GRB14Q14449 540 aa27.26■■□□□ 1.95
HOMER3-203ENST00000433218 MOV10L1Q9BXT6 1211 aaKnown RBP27.26■■□□□ 1.95
HOMER3-203ENST00000433218 CWC22Q9HCG8 908 aaKnown RBP27.26■■□□□ 1.95
HOMER3-203ENST00000433218 OGDHLQ9ULD0 1010 aa27.26■■□□□ 1.95
HOMER3-203ENST00000433218 MCM3APO60318 1980 aa27.26■■□□□ 1.95
HOMER3-203ENST00000433218 SAMD1Q6SPF0 538 aaPredicted RBP27.25■■□□□ 1.95
HOMER3-203ENST00000433218 KBTBD3Q8NAB2 608 aa27.25■■□□□ 1.95
HOMER3-203ENST00000433218 ATG4CQ96DT6 458 aa27.25■■□□□ 1.95
HOMER3-203ENST00000433218 STRBPQ96SI9 672 aaKnown RBP27.25■■□□□ 1.95
HOMER3-203ENST00000433218 GNL3Q9BVP2 549 aaKnown RBP eCLIP27.25■■□□□ 1.95
HOMER3-203ENST00000433218 GSG1L2A8MUP6 293 aa27.24■■□□□ 1.95
HOMER3-203ENST00000433218 EVI5O60447 810 aa27.24■■□□□ 1.95
HOMER3-203ENST00000433218 NECAB2Q7Z6G3 386 aa27.24■■□□□ 1.95
HOMER3-203ENST00000433218 C7orf61Q8IZ16 206 aa27.24■■□□□ 1.95
HOMER3-203ENST00000433218 TMX2Q9Y320 296 aa27.24■■□□□ 1.95
HOMER3-203ENST00000433218 ROBO3Q96MS0 1386 aa27.24■■□□□ 1.95
HOMER3-203ENST00000433218 CCNA1P78396 465 aa27.24■■□□□ 1.95
HOMER3-203ENST00000433218 LHX8Q68G74 356 aa27.24■■□□□ 1.95
HOMER3-203ENST00000433218 VCPKMTQ9H867 229 aa27.24■■□□□ 1.95
HOMER3-203ENST00000433218 FBXO28Q9NVF7 368 aa27.24■■□□□ 1.95
HOMER3-203ENST00000433218 LTBP2Q14767 1821 aa27.23■■□□□ 1.95
HOMER3-203ENST00000433218 EEF2P13639 858 aaKnown RBP27.23■■□□□ 1.95
HOMER3-203ENST00000433218 ATP2B2Q01814 1243 aa27.23■■□□□ 1.95
HOMER3-203ENST00000433218 ANKLE1Q8NAG6 615 aa27.23■■□□□ 1.95
HOMER3-203ENST00000433218 TRPV1Q8NER1 839 aa27.23■■□□□ 1.95
HOMER3-203ENST00000433218 PI4K2BQ8TCG2 481 aa27.23■■□□□ 1.95
HOMER3-203ENST00000433218 SEC62Q99442 399 aaKnown RBP27.23■■□□□ 1.95
HOMER3-203ENST00000433218 SPATC1LQ9H0A9 340 aa27.23■■□□□ 1.95
HOMER3-203ENST00000433218 SLC15A5A6NIM6 579 aa27.22■■□□□ 1.95
HOMER3-203ENST00000433218 FLOT1O75955 427 aa27.22■■□□□ 1.95
HOMER3-203ENST00000433218 COG2Q14746 738 aa27.22■■□□□ 1.95
HOMER3-203ENST00000433218 ARHGEF10LQ9HCE6 1279 aa27.22■■□□□ 1.95
HOMER3-203ENST00000433218 ZMYND8Q9ULU4 1186 aaPredicted RBP27.22■■□□□ 1.95
HOMER3-203ENST00000433218 GPAA1O43292 621 aa27.21■■□□□ 1.95
HOMER3-203ENST00000433218 CYP2C19P33261 490 aa27.21■■□□□ 1.95
HOMER3-203ENST00000433218 IRX6P78412 446 aaPredicted RBP27.21■■□□□ 1.95
HOMER3-203ENST00000433218 ZSCAN25Q6NSZ9 544 aa27.21■■□□□ 1.95
HOMER3-203ENST00000433218 APPBP2Q92624 585 aa27.21■■□□□ 1.95
HOMER3-203ENST00000433218 ARPP21Q9UBL0 812 aaPredicted RBP27.21■■□□□ 1.95
HOMER3-203ENST00000433218 NR2E3Q9Y5X4 410 aa27.21■■□□□ 1.95
HOMER3-203ENST00000433218 IGHA2P01877 340 aa27.2■■□□□ 1.94
HOMER3-203ENST00000433218 ERCC3P19447 782 aa27.2■■□□□ 1.94
HOMER3-203ENST00000433218 RASA1P20936 1047 aa27.2■■□□□ 1.94
HOMER3-203ENST00000433218 ADORA2AP29274 412 aa27.2■■□□□ 1.94
HOMER3-203ENST00000433218 DSG3P32926 999 aa27.2■■□□□ 1.94
HOMER3-203ENST00000433218 NBPF3Q9H094 633 aa27.2■■□□□ 1.94
HOMER3-203ENST00000433218 C11orf49Q9H6J7 331 aa27.2■■□□□ 1.94
HOMER3-203ENST00000433218 HOXC6P09630 235 aa27.19■■□□□ 1.94
HOMER3-203ENST00000433218 SYN1P17600 705 aa27.19■■□□□ 1.94
HOMER3-203ENST00000433218 TRMT44Q8IYL2 757 aaKnown RBP27.19■■□□□ 1.94
HOMER3-203ENST00000433218 LPAR1Q92633 364 aa27.19■■□□□ 1.94
HOMER3-203ENST00000433218 NUP88Q99567 741 aaPredicted RBP27.19■■□□□ 1.94
HOMER3-203ENST00000433218 IVNS1ABPQ9Y6Y0 642 aa27.19■■□□□ 1.94
HOMER3-203ENST00000433218 WDR46O15213 610 aaKnown RBP27.18■■□□□ 1.94
HOMER3-203ENST00000433218 RNF113AO15541 343 aaKnown RBP27.18■■□□□ 1.94
HOMER3-203ENST00000433218 COBLO75128 1261 aa27.18■■□□□ 1.94
HOMER3-203ENST00000433218 PLS1Q14651 629 aa27.18■■□□□ 1.94
HOMER3-203ENST00000433218 AMOTL1Q8IY63 956 aa27.18■■□□□ 1.94
HOMER3-203ENST00000433218 CCDC17Q96LX7 622 aa27.18■■□□□ 1.94
HOMER3-203ENST00000433218 STAP2Q9UGK3 403 aa27.18■■□□□ 1.94
HOMER3-203ENST00000433218 SALL3Q9BXA9 1300 aa27.18■■□□□ 1.94
HOMER3-203ENST00000433218 COL6A1P12109 1028 aa27.17■■□□□ 1.94
HOMER3-203ENST00000433218 TMEM132BQ14DG7 1078 aa27.17■■□□□ 1.94
HOMER3-203ENST00000433218 GPATCH3Q96I76 525 aa27.17■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms