RNA–Protein interactions for RNA: ENST00000429856.1

HMGB1P9-201, Transcript of high mobility group box 1 pseudogene 9, humanhuman

BASIC

Gene HMGB1P9, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P9-201ENST00000429856 ALPK1Q96QP1 1244 aa4.72□□□□□ -1.65
HMGB1P9-201ENST00000429856 COPRSQ9NQ92 184 aa4.72□□□□□ -1.65
HMGB1P9-201ENST00000429856 SEMA3GQ9NS98 782 aa4.72□□□□□ -1.65
HMGB1P9-201ENST00000429856 USP35Q9P2H5 1018 aa4.72□□□□□ -1.65
HMGB1P9-201ENST00000429856 MAPK8IP1Q9UQF2 711 aa4.72□□□□□ -1.65
HMGB1P9-201ENST00000429856 LRIG2O94898 1065 aa4.71□□□□□ -1.66
HMGB1P9-201ENST00000429856 EOMESO95936 686 aa4.71□□□□□ -1.66
HMGB1P9-201ENST00000429856 F13A1P00488 732 aa4.71□□□□□ -1.66
HMGB1P9-201ENST00000429856 GARTP22102 1010 aa4.71□□□□□ -1.66
HMGB1P9-201ENST00000429856 CAP2P40123 477 aa4.71□□□□□ -1.66
HMGB1P9-201ENST00000429856 CWF19L2Q2TBE0 894 aaKnown RBP4.71□□□□□ -1.66
HMGB1P9-201ENST00000429856 CDKAL1Q5VV42 579 aa4.71□□□□□ -1.66
HMGB1P9-201ENST00000429856 TTC6Q86TZ1 520 aa4.71□□□□□ -1.66
HMGB1P9-201ENST00000429856 USP48Q86UV5 1035 aa4.71□□□□□ -1.66
HMGB1P9-201ENST00000429856 ZNF296Q8WUU4 475 aaPredicted RBP4.71□□□□□ -1.66
HMGB1P9-201ENST00000429856 LRRC3Q9BY71 257 aa4.71□□□□□ -1.66
HMGB1P9-201ENST00000429856 ADAM30Q9UKF2 790 aa4.71□□□□□ -1.66
HMGB1P9-201ENST00000429856 GREM1O60565 184 aa4.7□□□□□ -1.66
HMGB1P9-201ENST00000429856 PGRP06401 933 aa4.7□□□□□ -1.66
HMGB1P9-201ENST00000429856 GRK4P32298 578 aa4.7□□□□□ -1.66
HMGB1P9-201ENST00000429856 NFIXQ14938 502 aa4.7□□□□□ -1.66
HMGB1P9-201ENST00000429856 FBXL19Q6PCT2 694 aa4.7□□□□□ -1.66
HMGB1P9-201ENST00000429856 REC114Q7Z4M0 266 aa4.7□□□□□ -1.66
HMGB1P9-201ENST00000429856 KIAA0825Q8IV33 1275 aa4.7□□□□□ -1.66
HMGB1P9-201ENST00000429856 MFSD2AQ8NA29 543 aa4.7□□□□□ -1.66
HMGB1P9-201ENST00000429856 MYLIPQ8WY64 445 aa4.7□□□□□ -1.66
HMGB1P9-201ENST00000429856 CDK8P49336 464 aa4.69□□□□□ -1.66
HMGB1P9-201ENST00000429856 MLECQ14165 292 aa4.69□□□□□ -1.66
HMGB1P9-201ENST00000429856 SFRP5Q5T4F7 317 aa4.69□□□□□ -1.66
HMGB1P9-201ENST00000429856 ERICH6BQ5W0A0 696 aa4.69□□□□□ -1.66
HMGB1P9-201ENST00000429856 SLC6A19Q695T7 634 aa4.69□□□□□ -1.66
HMGB1P9-201ENST00000429856 ARMCX6Q7L4S7 300 aa4.69□□□□□ -1.66
HMGB1P9-201ENST00000429856 MRPL41Q8IXM3 137 aaKnown RBP4.69□□□□□ -1.66
HMGB1P9-201ENST00000429856 ZNF654Q8IZM8 581 aa4.69□□□□□ -1.66
HMGB1P9-201ENST00000429856 BAHD1Q8TBE0 780 aaPredicted RBP4.69□□□□□ -1.66
HMGB1P9-201ENST00000429856 BORCS6Q96GS4 357 aa4.69□□□□□ -1.66
HMGB1P9-201ENST00000429856 SPON2Q9BUD6 331 aa4.69□□□□□ -1.66
HMGB1P9-201ENST00000429856 NT5C1AQ9BXI3 368 aa4.69□□□□□ -1.66
HMGB1P9-201ENST00000429856 SLAMF8Q9P0V8 285 aa4.69□□□□□ -1.66
HMGB1P9-201ENST00000429856 ADAMTS1Q9UHI8 967 aa4.69□□□□□ -1.66
HMGB1P9-201ENST00000429856 TPX2Q9ULW0 747 aaKnown RBP4.69□□□□□ -1.66
HMGB1P9-201ENST00000429856 PRR36Q9H6K5 1346 aa4.69□□□□□ -1.66
HMGB1P9-201ENST00000429856 H3BS24 57 aa4.68□□□□□ -1.66
HMGB1P9-201ENST00000429856 CST3P01034 146 aaPredicted RBP4.68□□□□□ -1.66
HMGB1P9-201ENST00000429856 PLCG1P19174 1290 aa4.68□□□□□ -1.66
HMGB1P9-201ENST00000429856 APOBRQ0VD83 1088 aa4.68□□□□□ -1.66
HMGB1P9-201ENST00000429856 SLBPQ14493 270 aaKnown RBP eCLIP4.68□□□□□ -1.66
HMGB1P9-201ENST00000429856 TMEM201Q5SNT2 666 aa4.68□□□□□ -1.66
HMGB1P9-201ENST00000429856 TCERG1LQ5VWI1 586 aa4.68□□□□□ -1.66
HMGB1P9-201ENST00000429856 ZNF746Q6NUN9 644 aaPredicted RBP4.68□□□□□ -1.66
HMGB1P9-201ENST00000429856 THAP5Q7Z6K1 395 aa4.68□□□□□ -1.66
HMGB1P9-201ENST00000429856 METTL16Q86W50 562 aaKnown RBP4.68□□□□□ -1.66
HMGB1P9-201ENST00000429856 MFSD4AQ8N468 514 aa4.68□□□□□ -1.66
HMGB1P9-201ENST00000429856 UBE2FQ969M7 185 aa4.68□□□□□ -1.66
HMGB1P9-201ENST00000429856 SPATA32Q96LK8 384 aa4.68□□□□□ -1.66
HMGB1P9-201ENST00000429856 FBRSQ9HAH7 460 aa4.68□□□□□ -1.66
HMGB1P9-201ENST00000429856 DDX41Q9UJV9 622 aaKnown RBP4.68□□□□□ -1.66
HMGB1P9-201ENST00000429856 SHROOM4Q9ULL8 1493 aa4.68□□□□□ -1.66
HMGB1P9-201ENST00000429856 TLR3O15455 904 aaKnown RBP4.67□□□□□ -1.66
HMGB1P9-201ENST00000429856 TCF3P15923 654 aa4.67□□□□□ -1.66
HMGB1P9-201ENST00000429856 ZNF165P49910 485 aa4.67□□□□□ -1.66
HMGB1P9-201ENST00000429856 YARSP54577 528 aaKnown RBP4.67□□□□□ -1.66
HMGB1P9-201ENST00000429856 DLG4P78352 724 aa4.67□□□□□ -1.66
HMGB1P9-201ENST00000429856 HDLBPQ00341 1268 aaKnown RBP4.67□□□□□ -1.66
HMGB1P9-201ENST00000429856 ZNF394Q53GI3 561 aa4.67□□□□□ -1.66
HMGB1P9-201ENST00000429856 ZNF385BQ569K4 471 aa4.67□□□□□ -1.66
HMGB1P9-201ENST00000429856 TMEM132EQ6IEE7 984 aa4.67□□□□□ -1.66
HMGB1P9-201ENST00000429856 C22orf34Q6ZV56 151 aa4.67□□□□□ -1.66
HMGB1P9-201ENST00000429856 UBE3DQ7Z6J8 389 aa4.67□□□□□ -1.66
HMGB1P9-201ENST00000429856 NT5DC4Q86YG4 428 aa4.67□□□□□ -1.66
HMGB1P9-201ENST00000429856 MCATQ8IVS2 390 aaKnown RBP4.67□□□□□ -1.66
HMGB1P9-201ENST00000429856 TMEM151BQ8IW70 566 aa4.67□□□□□ -1.66
HMGB1P9-201ENST00000429856 MARCH10Q8NA82 808 aaPredicted RBP4.67□□□□□ -1.66
HMGB1P9-201ENST00000429856 FBXO27Q8NI29 283 aa4.67□□□□□ -1.66
HMGB1P9-201ENST00000429856 NKD1Q969G9 470 aa4.67□□□□□ -1.66
HMGB1P9-201ENST00000429856 TMEM87BQ96K49 555 aa4.67□□□□□ -1.66
HMGB1P9-201ENST00000429856 COX4I2Q96KJ9 171 aa4.67□□□□□ -1.66
HMGB1P9-201ENST00000429856 TJP2Q9UDY2 1190 aa4.67□□□□□ -1.66
HMGB1P9-201ENST00000429856 CNOT6Q9ULM6 557 aaKnown RBP4.67□□□□□ -1.66
HMGB1P9-201ENST00000429856 PCDHGB7Q9Y5F8 929 aa4.67□□□□□ -1.66
HMGB1P9-201ENST00000429856 CNTNAP4Q9C0A0 1308 aa4.67□□□□□ -1.66
HMGB1P9-201ENST00000429856 A0A0G2JLL6 359 aaPredicted RBP4.66□□□□□ -1.66
HMGB1P9-201ENST00000429856 ATE1O95260 518 aa4.66□□□□□ -1.66
HMGB1P9-201ENST00000429856 HTR3BO95264 441 aa4.66□□□□□ -1.66
HMGB1P9-201ENST00000429856 NKG7Q16617 165 aa4.66□□□□□ -1.66
HMGB1P9-201ENST00000429856 PRAMEF13Q5VWM6 474 aa4.66□□□□□ -1.66
HMGB1P9-201ENST00000429856 PRRT2Q7Z6L0 340 aaPredicted RBP4.66□□□□□ -1.66
HMGB1P9-201ENST00000429856 SLITRK4Q8IW52 837 aa4.66□□□□□ -1.66
HMGB1P9-201ENST00000429856 REXO1Q8N1G1 1221 aaKnown RBP4.66□□□□□ -1.66
HMGB1P9-201ENST00000429856 FAM13CQ8NE31 585 aa4.66□□□□□ -1.66
HMGB1P9-201ENST00000429856 CXorf38Q8TB03 319 aa4.66□□□□□ -1.66
HMGB1P9-201ENST00000429856 ACSF2Q96CM8 615 aaPredicted RBP4.66□□□□□ -1.66
HMGB1P9-201ENST00000429856 KCNC2Q96PR1 638 aa4.66□□□□□ -1.66
HMGB1P9-201ENST00000429856 MIPEPQ99797 713 aa4.66□□□□□ -1.66
HMGB1P9-201ENST00000429856 TGIF2Q9GZN2 237 aa4.66□□□□□ -1.66
HMGB1P9-201ENST00000429856 UBP1Q9NZI7 540 aa4.66□□□□□ -1.66
HMGB1P9-201ENST00000429856 ZSWIM5Q9P217 1185 aa4.66□□□□□ -1.66
HMGB1P9-201ENST00000429856 REV1Q9UBZ9 1251 aa4.66□□□□□ -1.66
HMGB1P9-201ENST00000429856 EPB41L3Q9Y2J2 1087 aaPredicted RBP4.66□□□□□ -1.66
HMGB1P9-201ENST00000429856 POLR3KQ9Y2Y1 108 aaPredicted RBP4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms