RNA–Protein interactions for RNA: ENST00000429595.1

PTPRK-211, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 3

Gene PTPRK, Length 558 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-211ENST00000429595 PLD6Q8N2A8 252 aaKnown RBP9.45□□□□□ -0.9
PTPRK-211ENST00000429595 ASIC4Q96FT7 647 aa9.45□□□□□ -0.9
PTPRK-211ENST00000429595 BTG4Q9NY30 223 aa9.45□□□□□ -0.9
PTPRK-211ENST00000429595 TRAK1Q9UPV9 953 aa9.45□□□□□ -0.9
PTPRK-211ENST00000429595 ADGRL2O95490 1459 aa9.45□□□□□ -0.9
PTPRK-211ENST00000429595 BNIP3Q12983 259 aa9.44□□□□□ -0.9
PTPRK-211ENST00000429595 FAM181AQ8N9Y4 354 aa9.44□□□□□ -0.9
PTPRK-211ENST00000429595 TMC1Q8TDI8 760 aa9.44□□□□□ -0.9
PTPRK-211ENST00000429595 ALKBH8Q96BT7 664 aaKnown RBP9.44□□□□□ -0.9
PTPRK-211ENST00000429595 ATXN3LQ9H3M9 355 aa9.44□□□□□ -0.9
PTPRK-211ENST00000429595 ANKRD30AQ9BXX3 1397 aa9.44□□□□□ -0.9
PTPRK-211ENST00000429595 PXDNQ92626 1479 aa9.44□□□□□ -0.9
PTPRK-211ENST00000429595 USP32Q8NFA0 1604 aa9.43□□□□□ -0.9
PTPRK-211ENST00000429595 PTPN23Q9H3S7 1636 aa9.43□□□□□ -0.9
PTPRK-211ENST00000429595 PRELPP51888 382 aa9.43□□□□□ -0.9
PTPRK-211ENST00000429595 FZD5Q13467 585 aa9.43□□□□□ -0.9
PTPRK-211ENST00000429595 ZNF792Q3KQV3 632 aa9.43□□□□□ -0.9
PTPRK-211ENST00000429595 CYP27C1Q4G0S4 372 aa9.43□□□□□ -0.9
PTPRK-211ENST00000429595 SMYD4Q8IYR2 804 aaPredicted RBP9.43□□□□□ -0.9
PTPRK-211ENST00000429595 POU5F2Q8N7G0 328 aa9.43□□□□□ -0.9
PTPRK-211ENST00000429595 STK35Q8TDR2 534 aa9.43□□□□□ -0.9
PTPRK-211ENST00000429595 PIDD1Q9HB75 910 aa9.43□□□□□ -0.9
PTPRK-211ENST00000429595 KRT82Q9NSB4 513 aa9.43□□□□□ -0.9
PTPRK-211ENST00000429595 TNS1Q9HBL0 1735 aaKnown RBP9.42□□□□□ -0.9
PTPRK-211ENST00000429595 FCGRTP55899 365 aa9.42□□□□□ -0.9
PTPRK-211ENST00000429595 TTLL4Q14679 1199 aa9.42□□□□□ -0.9
PTPRK-211ENST00000429595 PLCL1Q15111 1095 aa9.42□□□□□ -0.9
PTPRK-211ENST00000429595 RBCK1Q9BYM8 510 aa9.42□□□□□ -0.9
PTPRK-211ENST00000429595 NWD2Q9ULI1 1742 aa9.42□□□□□ -0.9
PTPRK-211ENST00000429595 LEFTY1O75610 366 aa9.41□□□□□ -0.9
PTPRK-211ENST00000429595 NEFMP07197 916 aa9.41□□□□□ -0.9
PTPRK-211ENST00000429595 SLFN14P0C7P3 912 aa9.41□□□□□ -0.9
PTPRK-211ENST00000429595 HCLS1P14317 486 aaPredicted RBP9.41□□□□□ -0.9
PTPRK-211ENST00000429595 JAG1P78504 1218 aa9.41□□□□□ -0.9
PTPRK-211ENST00000429595 DTHD1Q6ZMT9 781 aa9.41□□□□□ -0.9
PTPRK-211ENST00000429595 STK11IPQ8N1F8 1099 aa9.41□□□□□ -0.9
PTPRK-211ENST00000429595 DMRTB1Q96MA1 342 aa9.41□□□□□ -0.9
PTPRK-211ENST00000429595 GPN3Q9UHW5 284 aaPredicted RBP9.41□□□□□ -0.9
PTPRK-211ENST00000429595 NRKQ7Z2Y5 1582 aa9.41□□□□□ -0.9
PTPRK-211ENST00000429595 SPATA31A5Q5VU36 1347 aa9.4□□□□□ -0.9
PTPRK-211ENST00000429595 SPATA31A7Q8IWB4 1347 aa9.4□□□□□ -0.9
PTPRK-211ENST00000429595 C8AP07357 584 aa9.4□□□□□ -0.9
PTPRK-211ENST00000429595 CD96P40200 585 aa9.4□□□□□ -0.9
PTPRK-211ENST00000429595 NETO1Q8TDF5 533 aa9.4□□□□□ -0.9
PTPRK-211ENST00000429595 CCDC144AA2RUR9 1427 aa9.39□□□□□ -0.91
PTPRK-211ENST00000429595 ABCC5O15440 1437 aa9.39□□□□□ -0.91
PTPRK-211ENST00000429595 PLCH1Q4KWH8 1693 aa9.39□□□□□ -0.91
PTPRK-211ENST00000429595 CD8BP10966 210 aa9.39□□□□□ -0.91
PTPRK-211ENST00000429595 RETREG2Q8NC44 543 aa9.39□□□□□ -0.91
PTPRK-211ENST00000429595 MISP3Q96FF7 219 aa9.39□□□□□ -0.91
PTPRK-211ENST00000429595 TMEM39AQ9NV64 488 aa9.39□□□□□ -0.91
PTPRK-211ENST00000429595 ADAMTS6Q9UKP5 1117 aa9.39□□□□□ -0.91
PTPRK-211ENST00000429595 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.39□□□□□ -0.91
PTPRK-211ENST00000429595 ROBO2Q9HCK4 1378 aa9.38□□□□□ -0.91
PTPRK-211ENST00000429595 DLC1Q96QB1 1528 aa9.38□□□□□ -0.91
PTPRK-211ENST00000429595 TMC7Q7Z402 723 aa9.38□□□□□ -0.91
PTPRK-211ENST00000429595 KCNB2Q92953 911 aa9.38□□□□□ -0.91
PTPRK-211ENST00000429595 DUSP23Q9BVJ7 150 aa9.38□□□□□ -0.91
PTPRK-211ENST00000429595 BCO2Q9BYV7 579 aa9.38□□□□□ -0.91
PTPRK-211ENST00000429595 STK32BQ9NY57 414 aa9.38□□□□□ -0.91
PTPRK-211ENST00000429595 HFM1A2PYH4 1435 aa9.38□□□□□ -0.91
PTPRK-211ENST00000429595 NUP188Q5SRE5 1749 aa9.37□□□□□ -0.91
PTPRK-211ENST00000429595 RREB1Q92766 1687 aa9.37□□□□□ -0.91
PTPRK-211ENST00000429595 RNGTTO60942 597 aaKnown RBP9.37□□□□□ -0.91
PTPRK-211ENST00000429595 FUT4P22083 530 aa9.37□□□□□ -0.91
PTPRK-211ENST00000429595 SULF2Q8IWU5 870 aa9.37□□□□□ -0.91
PTPRK-211ENST00000429595 ISL2Q96A47 359 aa9.37□□□□□ -0.91
PTPRK-211ENST00000429595 MTFR1LQ9H019 292 aa9.37□□□□□ -0.91
PTPRK-211ENST00000429595 ARHGEF10O15013 1369 aa9.37□□□□□ -0.91
PTPRK-211ENST00000429595 SOWAHDA6NJG2 315 aa9.36□□□□□ -0.91
PTPRK-211ENST00000429595 GRIN3BO60391 1043 aa9.36□□□□□ -0.91
PTPRK-211ENST00000429595 OXCT1P55809 520 aa9.36□□□□□ -0.91
PTPRK-211ENST00000429595 PPP2R3AQ06190 1150 aa9.36□□□□□ -0.91
PTPRK-211ENST00000429595 PDGFDQ9GZP0 370 aaPredicted RBP9.36□□□□□ -0.91
PTPRK-211ENST00000429595 MBNL3Q9NUK0 354 aaKnown RBP9.36□□□□□ -0.91
PTPRK-211ENST00000429595 USP35Q9P2H5 1018 aa9.36□□□□□ -0.91
PTPRK-211ENST00000429595 PCOLCE2Q9UKZ9 415 aa9.36□□□□□ -0.91
PTPRK-211ENST00000429595 PLAGL2Q9UPG8 496 aa9.36□□□□□ -0.91
PTPRK-211ENST00000429595 MYOM1P52179 1685 aa9.36□□□□□ -0.91
PTPRK-211ENST00000429595 NRXN3Q9Y4C0 1643 aa9.35□□□□□ -0.91
PTPRK-211ENST00000429595 RNASE1P07998 156 aaKnown RBP9.35□□□□□ -0.91
PTPRK-211ENST00000429595 DAPK1P53355 1430 aa9.35□□□□□ -0.91
PTPRK-211ENST00000429595 EVA1CP58658 441 aa9.35□□□□□ -0.91
PTPRK-211ENST00000429595 ZC3H12AQ5D1E8 599 aaKnown RBP9.35□□□□□ -0.91
PTPRK-211ENST00000429595 TNS3Q68CZ2 1445 aa9.35□□□□□ -0.91
PTPRK-211ENST00000429595 PLSCR1O15162 318 aa9.34□□□□□ -0.91
PTPRK-211ENST00000429595 CEACAM5P06731 702 aa9.34□□□□□ -0.91
PTPRK-211ENST00000429595 ARNTP27540 789 aa9.34□□□□□ -0.91
PTPRK-211ENST00000429595 PRKCQQ04759 706 aa9.34□□□□□ -0.91
PTPRK-211ENST00000429595 LCE1DQ5T752 114 aa9.34□□□□□ -0.91
PTPRK-211ENST00000429595 NXPE4Q6UWF7 544 aa9.34□□□□□ -0.91
PTPRK-211ENST00000429595 MPRIPQ6WCQ1 1025 aa9.34□□□□□ -0.91
PTPRK-211ENST00000429595 TOP6BLQ8N6T0 577 aa9.34□□□□□ -0.91
PTPRK-211ENST00000429595 ZNF526Q8TF50 670 aaPredicted RBP9.34□□□□□ -0.91
PTPRK-211ENST00000429595 MKNK2Q9HBH9 465 aa9.34□□□□□ -0.91
PTPRK-211ENST00000429595 PRDM11Q9NQV5 511 aa9.34□□□□□ -0.91
PTPRK-211ENST00000429595 NLRP2Q9NX02 1062 aa9.34□□□□□ -0.91
PTPRK-211ENST00000429595 VAV3Q9UKW4 847 aa9.34□□□□□ -0.91
PTPRK-211ENST00000429595 SPATA31A1Q5TZJ5 1347 aa9.33□□□□□ -0.92
PTPRK-211ENST00000429595 XRCC5P13010 732 aaKnown RBP9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms