RNA–Protein interactions for RNA: ENST00000429411.5

HPS4-205, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 3,492 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-205ENST00000429411 FOXP2O15409 715 aa9.12□□□□□ -0.95
HPS4-205ENST00000429411 PPP6R2O75170 966 aa9.12□□□□□ -0.95
HPS4-205ENST00000429411 SSBP05455 408 aaKnown RBP eCLIP9.12□□□□□ -0.95
HPS4-205ENST00000429411 NCAPHQ15003 741 aa9.12□□□□□ -0.95
HPS4-205ENST00000429411 RESP18Q5W5W9 173 aa9.12□□□□□ -0.95
HPS4-205ENST00000429411 KIAA1328Q86T90 577 aa9.12□□□□□ -0.95
HPS4-205ENST00000429411 DZIP1Q86YF9 867 aaKnown RBP9.12□□□□□ -0.95
HPS4-205ENST00000429411 ANKRD18AQ8IVF6 992 aa9.12□□□□□ -0.95
HPS4-205ENST00000429411 GOLGA6L1Q8N7Z2 621 aa9.12□□□□□ -0.95
HPS4-205ENST00000429411 IGDCC4Q8TDY8 1250 aa9.12□□□□□ -0.95
HPS4-205ENST00000429411 GPKOWQ92917 476 aaPredicted RBP eCLIP9.12□□□□□ -0.95
HPS4-205ENST00000429411 SLF1Q9BQI6 1058 aa9.12□□□□□ -0.95
HPS4-205ENST00000429411 TMEM51Q9NW97 253 aa9.12□□□□□ -0.95
HPS4-205ENST00000429411 NFAT5O94916 1531 aa9.12□□□□□ -0.95
HPS4-205ENST00000429411 CCDC194A0A1B0GVG4 234 aa9.12□□□□□ -0.95
HPS4-205ENST00000429411 IKBKBO14920 756 aa9.12□□□□□ -0.95
HPS4-205ENST00000429411 MATR3P43243 847 aaKnown RBP eCLIP9.12□□□□□ -0.95
HPS4-205ENST00000429411 CHRNDQ07001 517 aa9.12□□□□□ -0.95
HPS4-205ENST00000429411 TAF3Q5VWG9 929 aa9.12□□□□□ -0.95
HPS4-205ENST00000429411 MLKLQ8NB16 471 aa9.12□□□□□ -0.95
HPS4-205ENST00000429411 SLC4A9Q96Q91 983 aa9.12□□□□□ -0.95
HPS4-205ENST00000429411 FHDC1Q9C0D6 1143 aaPredicted RBP9.12□□□□□ -0.95
HPS4-205ENST00000429411 MCM9Q9NXL9 1143 aa9.12□□□□□ -0.95
HPS4-205ENST00000429411 RFX7Q2KHR2 1363 aa9.11□□□□□ -0.95
HPS4-205ENST00000429411 GSG1L2A8MUP6 293 aa9.11□□□□□ -0.95
HPS4-205ENST00000429411 FMNL1O95466 1100 aaPredicted RBP9.11□□□□□ -0.95
HPS4-205ENST00000429411 CASP14P31944 242 aa9.11□□□□□ -0.95
HPS4-205ENST00000429411 STAT6P42226 847 aa9.11□□□□□ -0.95
HPS4-205ENST00000429411 PTGDRQ13258 359 aa9.11□□□□□ -0.95
HPS4-205ENST00000429411 HEATR3Q7Z4Q2 680 aa9.11□□□□□ -0.95
HPS4-205ENST00000429411 ARHGEF1Q92888 912 aaKnown RBP9.11□□□□□ -0.95
HPS4-205ENST00000429411 USP54Q70EL1 1684 aa9.11□□□□□ -0.95
HPS4-205ENST00000429411 IFNAR1P17181 557 aa9.11□□□□□ -0.95
HPS4-205ENST00000429411 UBA7P41226 1012 aa9.11□□□□□ -0.95
HPS4-205ENST00000429411 PPARDQ03181 441 aa9.11□□□□□ -0.95
HPS4-205ENST00000429411 UBXN1Q04323 297 aa9.11□□□□□ -0.95
HPS4-205ENST00000429411 RBL2Q08999 1139 aa9.11□□□□□ -0.95
HPS4-205ENST00000429411 CCDC178Q5BJE1 867 aa9.11□□□□□ -0.95
HPS4-205ENST00000429411 TTC38Q5R3I4 469 aa9.11□□□□□ -0.95
HPS4-205ENST00000429411 KANK3Q6NY19 840 aa9.11□□□□□ -0.95
HPS4-205ENST00000429411 CRACR2BQ8N4Y2 399 aaPredicted RBP9.11□□□□□ -0.95
HPS4-205ENST00000429411 ACRBPQ8NEB7 543 aa9.11□□□□□ -0.95
HPS4-205ENST00000429411 TRIM47Q96LD4 638 aa9.11□□□□□ -0.95
HPS4-205ENST00000429411 CDC5LQ99459 802 aaKnown RBP9.11□□□□□ -0.95
HPS4-205ENST00000429411 NBPF3Q9H094 633 aa9.11□□□□□ -0.95
HPS4-205ENST00000429411 ZHX3Q9H4I2 956 aa9.11□□□□□ -0.95
HPS4-205ENST00000429411 FAM170AA1A519 330 aa9.11□□□□□ -0.95
HPS4-205ENST00000429411 PLSCR1O15162 318 aa9.11□□□□□ -0.95
HPS4-205ENST00000429411 OAS2P29728 719 aaKnown RBP9.11□□□□□ -0.95
HPS4-205ENST00000429411 NOM1Q5C9Z4 860 aaKnown RBP9.11□□□□□ -0.95
HPS4-205ENST00000429411 TANGO6Q9C0B7 1094 aa9.11□□□□□ -0.95
HPS4-205ENST00000429411 ANKIB1Q9P2G1 1089 aa9.11□□□□□ -0.95
HPS4-205ENST00000429411 WWC2Q6AWC2 1192 aa9.1□□□□□ -0.95
HPS4-205ENST00000429411 AMOTL1Q8IY63 956 aa9.1□□□□□ -0.95
HPS4-205ENST00000429411 GOLGA1Q92805 767 aa9.1□□□□□ -0.95
HPS4-205ENST00000429411 CCDC87Q9NVE4 849 aa9.1□□□□□ -0.95
HPS4-205ENST00000429411 MARF1Q9Y4F3 1742 aaKnown RBP9.1□□□□□ -0.95
HPS4-205ENST00000429411 TFRCP02786 760 aaKnown RBP9.1□□□□□ -0.95
HPS4-205ENST00000429411 PNMA6AP0CW24 399 aaPredicted RBP9.1□□□□□ -0.95
HPS4-205ENST00000429411 KRT9P35527 623 aa9.1□□□□□ -0.95
HPS4-205ENST00000429411 PTPAQ15257 358 aa9.1□□□□□ -0.95
HPS4-205ENST00000429411 PSMB7Q99436 277 aa9.1□□□□□ -0.95
HPS4-205ENST00000429411 KAT14Q9H8E8 782 aa9.1□□□□□ -0.95
HPS4-205ENST00000429411 VPS18Q9P253 973 aa9.1□□□□□ -0.95
HPS4-205ENST00000429411 SAP30BPQ9UHR5 308 aaKnown RBP9.1□□□□□ -0.95
HPS4-205ENST00000429411 TNS2Q63HR2 1409 aa9.1□□□□□ -0.95
HPS4-205ENST00000429411 ENC1O14682 589 aa9.1□□□□□ -0.95
HPS4-205ENST00000429411 GOLGA8HP0CJ92 632 aa9.1□□□□□ -0.95
HPS4-205ENST00000429411 IDEP14735 1019 aa9.1□□□□□ -0.95
HPS4-205ENST00000429411 CHMP4BP1P59074 171 aa9.1□□□□□ -0.95
HPS4-205ENST00000429411 GABPB1Q06547 395 aaPredicted RBP9.1□□□□□ -0.95
HPS4-205ENST00000429411 TERF2Q15554 542 aa9.1□□□□□ -0.95
HPS4-205ENST00000429411 TIGD1Q96MW7 591 aa9.1□□□□□ -0.95
HPS4-205ENST00000429411 CPVLQ9H3G5 476 aa9.1□□□□□ -0.95
HPS4-205ENST00000429411 DEF6Q9H4E7 631 aa9.1□□□□□ -0.95
HPS4-205ENST00000429411 GPBP1L1Q9HC44 474 aaPredicted RBP9.1□□□□□ -0.95
HPS4-205ENST00000429411 PARP3Q9Y6F1 533 aa9.1□□□□□ -0.95
HPS4-205ENST00000429411 MROH5Q6ZUA9 1318 aa9.09□□□□□ -0.95
HPS4-205ENST00000429411 GOLGA6L9A6NEM1 432 aa9.09□□□□□ -0.95
HPS4-205ENST00000429411 GNAT2P19087 354 aa9.09□□□□□ -0.95
HPS4-205ENST00000429411 TRIM21P19474 475 aaKnown RBP9.09□□□□□ -0.95
HPS4-205ENST00000429411 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.09□□□□□ -0.95
HPS4-205ENST00000429411 PLEKHA4Q9H4M7 779 aa9.09□□□□□ -0.95
HPS4-205ENST00000429411 PCNTO95613 3336 aa9.09□□□□□ -0.95
HPS4-205ENST00000429411 CTAGE9A4FU28 777 aa9.09□□□□□ -0.95
HPS4-205ENST00000429411 CSF1RP07333 972 aa9.09□□□□□ -0.95
HPS4-205ENST00000429411 CYP2D6P10635 497 aa9.09□□□□□ -0.95
HPS4-205ENST00000429411 PTPREP23469 700 aa9.09□□□□□ -0.95
HPS4-205ENST00000429411 MTIF2P46199 727 aaKnown RBP9.09□□□□□ -0.95
HPS4-205ENST00000429411 TOB1P50616 345 aaPredicted RBP9.09□□□□□ -0.95
HPS4-205ENST00000429411 IQUBQ8NA54 791 aa9.09□□□□□ -0.95
HPS4-205ENST00000429411 CCDC47Q96A33 483 aaKnown RBP9.09□□□□□ -0.95
HPS4-205ENST00000429411 ZSCAN10Q96SZ4 725 aaPredicted RBP9.09□□□□□ -0.95
HPS4-205ENST00000429411 RABEP2Q9H5N1 569 aa9.09□□□□□ -0.95
HPS4-205ENST00000429411 ZNHIT6Q9NWK9 470 aaKnown RBP9.09□□□□□ -0.95
HPS4-205ENST00000429411 ZBTB12Q9Y330 459 aaPredicted RBP9.09□□□□□ -0.95
HPS4-205ENST00000429411 A0A0U1RQJ8 604 aa9.08□□□□□ -0.96
HPS4-205ENST00000429411 CYP19A1P11511 503 aaPredicted RBP9.08□□□□□ -0.96
HPS4-205ENST00000429411 BMP6P22004 513 aa9.08□□□□□ -0.96
HPS4-205ENST00000429411 LIFRP42702 1097 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms