RNA–Protein interactions for RNA: ENST00000427660.6

NUDCD1-202, Transcript of NudC domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene NUDCD1, Length 2,098 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1-202ENST00000427660 NLRP12P59046 1061 aa6.14□□□□□ -1.43
NUDCD1-202ENST00000427660 FAM50AQ14320 339 aaKnown RBP6.14□□□□□ -1.43
NUDCD1-202ENST00000427660 SETDB1Q15047 1291 aa6.14□□□□□ -1.43
NUDCD1-202ENST00000427660 EXOSC6Q5RKV6 272 aaKnown RBP6.14□□□□□ -1.43
NUDCD1-202ENST00000427660 AXDND1Q5T1B0 1012 aaPredicted RBP6.14□□□□□ -1.43
NUDCD1-202ENST00000427660 CNNM4Q6P4Q7 775 aa6.14□□□□□ -1.43
NUDCD1-202ENST00000427660 PRDM6Q9NQX0 595 aa6.14□□□□□ -1.43
NUDCD1-202ENST00000427660 RAD18Q9NS91 495 aa6.14□□□□□ -1.43
NUDCD1-202ENST00000427660 CRIM1Q9NZV1 1036 aa6.14□□□□□ -1.43
NUDCD1-202ENST00000427660 C9IYK1 514 aa6.13□□□□□ -1.43
NUDCD1-202ENST00000427660 TMPRSS2O15393 492 aa6.13□□□□□ -1.43
NUDCD1-202ENST00000427660 EPXP11678 715 aa6.13□□□□□ -1.43
NUDCD1-202ENST00000427660 GABREP78334 506 aa6.13□□□□□ -1.43
NUDCD1-202ENST00000427660 TDRD10Q5VZ19 366 aaKnown RBP6.13□□□□□ -1.43
NUDCD1-202ENST00000427660 CRACR2BQ8N4Y2 399 aaPredicted RBP6.13□□□□□ -1.43
NUDCD1-202ENST00000427660 BVESQ8NE79 360 aa6.13□□□□□ -1.43
NUDCD1-202ENST00000427660 MORC4Q8TE76 937 aa6.13□□□□□ -1.43
NUDCD1-202ENST00000427660 OSBP2Q969R2 916 aa6.13□□□□□ -1.43
NUDCD1-202ENST00000427660 TRIM39Q9HCM9 518 aa6.13□□□□□ -1.43
NUDCD1-202ENST00000427660 SPDYE3A6NKU9 549 aa6.13□□□□□ -1.43
NUDCD1-202ENST00000427660 PRODHO43272 600 aa6.13□□□□□ -1.43
NUDCD1-202ENST00000427660 TSPAN6O43657 245 aa6.13□□□□□ -1.43
NUDCD1-202ENST00000427660 PEX14O75381 377 aa6.13□□□□□ -1.43
NUDCD1-202ENST00000427660 PPM1BO75688 479 aa6.13□□□□□ -1.43
NUDCD1-202ENST00000427660 DNAJC8O75937 253 aaPredicted RBP6.13□□□□□ -1.43
NUDCD1-202ENST00000427660 DHCR24Q15392 516 aa6.13□□□□□ -1.43
NUDCD1-202ENST00000427660 RNF219Q5W0B1 726 aaPredicted RBP6.13□□□□□ -1.43
NUDCD1-202ENST00000427660 POMZP3Q6PJE2 187 aa6.13□□□□□ -1.43
NUDCD1-202ENST00000427660 GSTCDQ8NEC7 633 aa6.13□□□□□ -1.43
NUDCD1-202ENST00000427660 RCC1LQ96I51 464 aaKnown RBP6.13□□□□□ -1.43
NUDCD1-202ENST00000427660 ATXN3LQ9H3M9 355 aa6.13□□□□□ -1.43
NUDCD1-202ENST00000427660 WHRNQ9P202 907 aa6.13□□□□□ -1.43
NUDCD1-202ENST00000427660 APEX2Q9UBZ4 518 aa6.13□□□□□ -1.43
NUDCD1-202ENST00000427660 PHLDB1Q86UU1 1377 aa6.13□□□□□ -1.43
NUDCD1-202ENST00000427660 FAM83GA6ND36 823 aa6.12□□□□□ -1.43
NUDCD1-202ENST00000427660 NOP56O00567 594 aaKnown RBP6.12□□□□□ -1.43
NUDCD1-202ENST00000427660 BRINP1O60477 761 aa6.12□□□□□ -1.43
NUDCD1-202ENST00000427660 RASGRP1O95267 797 aa6.12□□□□□ -1.43
NUDCD1-202ENST00000427660 DLGAP3O95886 979 aa6.12□□□□□ -1.43
NUDCD1-202ENST00000427660 CD68P34810 354 aaPredicted RBP6.12□□□□□ -1.43
NUDCD1-202ENST00000427660 MCL1Q07820 350 aa6.12□□□□□ -1.43
NUDCD1-202ENST00000427660 PPP2R5AQ15172 486 aa6.12□□□□□ -1.43
NUDCD1-202ENST00000427660 ILDR2Q71H61 639 aa6.12□□□□□ -1.43
NUDCD1-202ENST00000427660 RAVER1Q8IY67 606 aaKnown RBP6.12□□□□□ -1.43
NUDCD1-202ENST00000427660 CCDC144CPQ8IYA2 1237 aa6.12□□□□□ -1.43
NUDCD1-202ENST00000427660 GALNT11Q8NCW6 608 aa6.12□□□□□ -1.43
NUDCD1-202ENST00000427660 PPP1R14AQ96A00 147 aa6.12□□□□□ -1.43
NUDCD1-202ENST00000427660 ASPSCR1Q9BZE9 553 aa6.12□□□□□ -1.43
NUDCD1-202ENST00000427660 FBRSQ9HAH7 460 aa6.12□□□□□ -1.43
NUDCD1-202ENST00000427660 ADAM11O75078 769 aa6.11□□□□□ -1.43
NUDCD1-202ENST00000427660 CST3P01034 146 aaPredicted RBP6.11□□□□□ -1.43
NUDCD1-202ENST00000427660 ASLP04424 464 aa6.11□□□□□ -1.43
NUDCD1-202ENST00000427660 C6orf222P0C671 652 aaPredicted RBP6.11□□□□□ -1.43
NUDCD1-202ENST00000427660 CDC37L1Q7L3B6 337 aa6.11□□□□□ -1.43
NUDCD1-202ENST00000427660 STRA8Q7Z7C7 330 aa6.11□□□□□ -1.43
NUDCD1-202ENST00000427660 EXOC8Q8IYI6 725 aa6.11□□□□□ -1.43
NUDCD1-202ENST00000427660 LEO1Q8WVC0 666 aaPredicted RBP6.11□□□□□ -1.43
NUDCD1-202ENST00000427660 MRGPRX3Q96LB0 322 aa6.11□□□□□ -1.43
NUDCD1-202ENST00000427660 DISC1Q9NRI5 854 aa6.11□□□□□ -1.43
NUDCD1-202ENST00000427660 FAM86C1Q9NVL1 165 aa6.11□□□□□ -1.43
NUDCD1-202ENST00000427660 GMPR2Q9P2T1 348 aaKnown RBP6.11□□□□□ -1.43
NUDCD1-202ENST00000427660 M0R082 166 aa6.11□□□□□ -1.43
NUDCD1-202ENST00000427660 SNRPBP14678 240 aaKnown RBP6.11□□□□□ -1.43
NUDCD1-202ENST00000427660 NKG7Q16617 165 aa6.11□□□□□ -1.43
NUDCD1-202ENST00000427660 ADAT2Q7Z6V5 191 aaKnown RBP6.11□□□□□ -1.43
NUDCD1-202ENST00000427660 TRIM59Q8IWR1 403 aa6.11□□□□□ -1.43
NUDCD1-202ENST00000427660 DTWD1Q8N5C7 304 aa6.11□□□□□ -1.43
NUDCD1-202ENST00000427660 ZNF417Q8TAU3 575 aa6.11□□□□□ -1.43
NUDCD1-202ENST00000427660 BAHD1Q8TBE0 780 aaPredicted RBP6.11□□□□□ -1.43
NUDCD1-202ENST00000427660 WDR66Q8TBY9 1149 aa6.11□□□□□ -1.43
NUDCD1-202ENST00000427660 TSR2Q969E8 191 aaKnown RBP6.11□□□□□ -1.43
NUDCD1-202ENST00000427660 FGD4Q96M96 766 aa6.11□□□□□ -1.43
NUDCD1-202ENST00000427660 FANCD2OSQ96PS1 177 aa6.11□□□□□ -1.43
NUDCD1-202ENST00000427660 ZNF587Q96SQ5 575 aaPredicted RBP6.11□□□□□ -1.43
NUDCD1-202ENST00000427660 PPP1R9AQ9ULJ8 1098 aa6.11□□□□□ -1.43
NUDCD1-202ENST00000427660 EMC9Q9Y3B6 208 aa6.11□□□□□ -1.43
NUDCD1-202ENST00000427660 IGF1RP08069 1367 aa6.1□□□□□ -1.43
NUDCD1-202ENST00000427660 A0A087WZG4 1122 aa6.1□□□□□ -1.43
NUDCD1-202ENST00000427660 MEGF11A6BM72 1044 aa6.1□□□□□ -1.43
NUDCD1-202ENST00000427660 EIF3JO75822 258 aaKnown RBP6.1□□□□□ -1.43
NUDCD1-202ENST00000427660 CD247P20963 164 aa6.1□□□□□ -1.43
NUDCD1-202ENST00000427660 GRIA2P42262 883 aa6.1□□□□□ -1.43
NUDCD1-202ENST00000427660 SLBPQ14493 270 aaKnown RBP eCLIP6.1□□□□□ -1.43
NUDCD1-202ENST00000427660 HLTFQ14527 1009 aaKnown RBP eCLIP6.1□□□□□ -1.43
NUDCD1-202ENST00000427660 FOXD4L6Q3SYB3 417 aaPredicted RBP6.1□□□□□ -1.43
NUDCD1-202ENST00000427660 DCAF15Q66K64 600 aa6.1□□□□□ -1.43
NUDCD1-202ENST00000427660 FOXD4L3Q6VB84 417 aaPredicted RBP6.1□□□□□ -1.43
NUDCD1-202ENST00000427660 BRAPQ7Z569 592 aa6.1□□□□□ -1.43
NUDCD1-202ENST00000427660 SLC7A14Q8TBB6 771 aa6.1□□□□□ -1.43
NUDCD1-202ENST00000427660 TMPRSS13Q9BYE2 586 aa6.1□□□□□ -1.43
NUDCD1-202ENST00000427660 SLC5A4Q9NY91 659 aa6.1□□□□□ -1.43
NUDCD1-202ENST00000427660 DDX3YO15523 660 aaKnown RBP6.1□□□□□ -1.43
NUDCD1-202ENST00000427660 GPR39O43194 453 aa6.1□□□□□ -1.43
NUDCD1-202ENST00000427660 FLT3P36888 993 aa6.1□□□□□ -1.43
NUDCD1-202ENST00000427660 NEK2P51955 445 aa6.1□□□□□ -1.43
NUDCD1-202ENST00000427660 RNF4P78317 190 aa6.1□□□□□ -1.43
NUDCD1-202ENST00000427660 SMC5Q8IY18 1101 aa6.1□□□□□ -1.43
NUDCD1-202ENST00000427660 ARHGEF39Q8N4T4 335 aa6.1□□□□□ -1.43
NUDCD1-202ENST00000427660 PTPRN2Q92932 1015 aa6.1□□□□□ -1.43
NUDCD1-202ENST00000427660 CCDC140Q96MF4 163 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms