RNA–Protein interactions for RNA: ENST00000424702.1

LSM8-204, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

TSL 1 (best) BASIC

Gene LSM8, Length 4,030 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-204ENST00000424702 CCDC43Q96MW1 224 aaKnown RBP8.34□□□□□ -1.07
LSM8-204ENST00000424702 MYL10Q9BUA6 226 aa8.34□□□□□ -1.07
LSM8-204ENST00000424702 CNPY2Q9Y2B0 182 aa8.34□□□□□ -1.07
LSM8-204ENST00000424702 SH2B2O14492 632 aaPredicted RBP8.34□□□□□ -1.07
LSM8-204ENST00000424702 HUNKP57058 714 aa8.34□□□□□ -1.07
LSM8-204ENST00000424702 CTR9Q6PD62 1173 aa8.34□□□□□ -1.07
LSM8-204ENST00000424702 REM2Q8IYK8 340 aaPredicted RBP8.34□□□□□ -1.07
LSM8-204ENST00000424702 SCYL3Q8IZE3 742 aa8.34□□□□□ -1.07
LSM8-204ENST00000424702 ZNF654Q8IZM8 581 aa8.34□□□□□ -1.07
LSM8-204ENST00000424702 CYP2D7A0A087X1C5 515 aa8.33□□□□□ -1.08
LSM8-204ENST00000424702 UNCXA6NJT0 531 aa8.33□□□□□ -1.08
LSM8-204ENST00000424702 ZNF76P36508 570 aa8.33□□□□□ -1.08
LSM8-204ENST00000424702 LIFRP42702 1097 aa8.33□□□□□ -1.08
LSM8-204ENST00000424702 SNAPC2Q13487 334 aa8.33□□□□□ -1.08
LSM8-204ENST00000424702 FAM47AQ5JRC9 791 aa8.33□□□□□ -1.08
LSM8-204ENST00000424702 APOA5Q6Q788 366 aa8.33□□□□□ -1.08
LSM8-204ENST00000424702 C16orf86Q6ZW13 317 aa8.33□□□□□ -1.08
LSM8-204ENST00000424702 CERS5Q8N5B7 392 aa8.33□□□□□ -1.08
LSM8-204ENST00000424702 PNMA1Q8ND90 353 aa8.33□□□□□ -1.08
LSM8-204ENST00000424702 LPAR1Q92633 364 aa8.33□□□□□ -1.08
LSM8-204ENST00000424702 CDCA5Q96FF9 252 aa8.33□□□□□ -1.08
LSM8-204ENST00000424702 RIOK1Q9BRS2 568 aaKnown RBP8.33□□□□□ -1.08
LSM8-204ENST00000424702 EPB41L4AQ9HCS5 686 aaPredicted RBP8.33□□□□□ -1.08
LSM8-204ENST00000424702 C6orf50Q9HD87 102 aa8.33□□□□□ -1.08
LSM8-204ENST00000424702 ANAPC4Q9UJX5 808 aa8.33□□□□□ -1.08
LSM8-204ENST00000424702 NEDD4P46934 1319 aa8.33□□□□□ -1.08
LSM8-204ENST00000424702 LRP5O75197 1615 aa8.33□□□□□ -1.08
LSM8-204ENST00000424702 GH2P01242 217 aa8.33□□□□□ -1.08
LSM8-204ENST00000424702 UBE2HP62256 183 aa8.33□□□□□ -1.08
LSM8-204ENST00000424702 ERO1BQ86YB8 467 aa8.33□□□□□ -1.08
LSM8-204ENST00000424702 MTMR6Q9Y217 621 aa8.33□□□□□ -1.08
LSM8-204ENST00000424702 DDX60Q8IY21 1712 aaKnown RBP8.33□□□□□ -1.08
LSM8-204ENST00000424702 USP17L10C9JJH3 530 aa8.33□□□□□ -1.08
LSM8-204ENST00000424702 CETPP11597 493 aa8.33□□□□□ -1.08
LSM8-204ENST00000424702 GNA11P29992 359 aa8.33□□□□□ -1.08
LSM8-204ENST00000424702 NLRP5P59047 1200 aa8.33□□□□□ -1.08
LSM8-204ENST00000424702 APOBEC3HQ6NTF7 200 aaKnown RBP8.33□□□□□ -1.08
LSM8-204ENST00000424702 MIGA2Q7L4E1 593 aa8.33□□□□□ -1.08
LSM8-204ENST00000424702 NSUN7Q8NE18 718 aaKnown RBP8.33□□□□□ -1.08
LSM8-204ENST00000424702 GPHNQ9NQX3 736 aaPredicted RBP8.33□□□□□ -1.08
LSM8-204ENST00000424702 CEP131Q9UPN4 1083 aa8.33□□□□□ -1.08
LSM8-204ENST00000424702 CCDC194A0A1B0GVG4 234 aa8.32□□□□□ -1.08
LSM8-204ENST00000424702 hCG_1984214I3L0E3 225 aa8.32□□□□□ -1.08
LSM8-204ENST00000424702 GDF11O95390 407 aa8.32□□□□□ -1.08
LSM8-204ENST00000424702 NBPF9Q3BBW0 867 aa8.32□□□□□ -1.08
LSM8-204ENST00000424702 CYB5R4Q7L1T6 521 aa8.32□□□□□ -1.08
LSM8-204ENST00000424702 ZNF713Q8N859 430 aaPredicted RBP8.32□□□□□ -1.08
LSM8-204ENST00000424702 NYAP2Q9P242 653 aa8.32□□□□□ -1.08
LSM8-204ENST00000424702 KINO60870 393 aaKnown RBP8.32□□□□□ -1.08
LSM8-204ENST00000424702 BMP3P12645 472 aa8.32□□□□□ -1.08
LSM8-204ENST00000424702 FSTL1Q12841 308 aa8.32□□□□□ -1.08
LSM8-204ENST00000424702 PLS1Q14651 629 aa8.32□□□□□ -1.08
LSM8-204ENST00000424702 CCDC47Q96A33 483 aaKnown RBP8.32□□□□□ -1.08
LSM8-204ENST00000424702 ZBTB21Q9ULJ3 1066 aa8.32□□□□□ -1.08
LSM8-204ENST00000424702 SYNPO2Q9UMS6 1093 aa8.32□□□□□ -1.08
LSM8-204ENST00000424702 TNRC6CQ9HCJ0 1690 aaKnown RBP8.32□□□□□ -1.08
LSM8-204ENST00000424702 DEXIO95424 95 aa8.32□□□□□ -1.08
LSM8-204ENST00000424702 PTMAP06454 111 aaKnown RBP8.32□□□□□ -1.08
LSM8-204ENST00000424702 ADD1P35611 737 aaKnown RBP8.32□□□□□ -1.08
LSM8-204ENST00000424702 ZNF157P51786 506 aaPredicted RBP8.32□□□□□ -1.08
LSM8-204ENST00000424702 GTF2A2P52657 109 aa8.32□□□□□ -1.08
LSM8-204ENST00000424702 ZYXQ15942 572 aaKnown RBP8.32□□□□□ -1.08
LSM8-204ENST00000424702 SMARCC2Q8TAQ2 1214 aa8.32□□□□□ -1.08
LSM8-204ENST00000424702 VAT1LQ9HCJ6 419 aa8.32□□□□□ -1.08
LSM8-204ENST00000424702 GPCPD1Q9NPB8 672 aa8.32□□□□□ -1.08
LSM8-204ENST00000424702 INCENPQ9NQS7 918 aa8.32□□□□□ -1.08
LSM8-204ENST00000424702 MRPL11Q9Y3B7 192 aaKnown RBP8.32□□□□□ -1.08
LSM8-204ENST00000424702 MANSC4A6NHS7 340 aaPredicted RBP8.32□□□□□ -1.08
LSM8-204ENST00000424702 TBC1D12O60347 775 aa8.32□□□□□ -1.08
LSM8-204ENST00000424702 ALDH1A1P00352 501 aa8.32□□□□□ -1.08
LSM8-204ENST00000424702 TXLNAP40222 546 aa8.32□□□□□ -1.08
LSM8-204ENST00000424702 NAPAP54920 295 aa8.32□□□□□ -1.08
LSM8-204ENST00000424702 BRAPQ7Z569 592 aa8.32□□□□□ -1.08
LSM8-204ENST00000424702 HOMER1Q86YM7 354 aa8.32□□□□□ -1.08
LSM8-204ENST00000424702 MCF2L2Q86YR7 1114 aa8.32□□□□□ -1.08
LSM8-204ENST00000424702 FANCBQ8NB91 859 aa8.32□□□□□ -1.08
LSM8-204ENST00000424702 DYNLL2Q96FJ2 89 aa8.32□□□□□ -1.08
LSM8-204ENST00000424702 TMEM39BQ9GZU3 492 aa8.32□□□□□ -1.08
LSM8-204ENST00000424702 ZHX2Q9Y6X8 837 aa8.32□□□□□ -1.08
LSM8-204ENST00000424702 WDR46O15213 610 aaKnown RBP8.31□□□□□ -1.08
LSM8-204ENST00000424702 FLOT1O75955 427 aa8.31□□□□□ -1.08
LSM8-204ENST00000424702 BMP15O95972 392 aa8.31□□□□□ -1.08
LSM8-204ENST00000424702 CYP2D6P10635 497 aa8.31□□□□□ -1.08
LSM8-204ENST00000424702 MRE11P49959 708 aa8.31□□□□□ -1.08
LSM8-204ENST00000424702 MAP1SQ66K74 1059 aaPredicted RBP8.31□□□□□ -1.08
LSM8-204ENST00000424702 ADGRA1Q86SQ6 560 aa8.31□□□□□ -1.08
LSM8-204ENST00000424702 TRPM4Q8TD43 1214 aa8.31□□□□□ -1.08
LSM8-204ENST00000424702 PHKBQ93100 1093 aa8.31□□□□□ -1.08
LSM8-204ENST00000424702 PARK7Q99497 189 aaKnown RBP8.31□□□□□ -1.08
LSM8-204ENST00000424702 SDF4Q9BRK5 362 aa8.31□□□□□ -1.08
LSM8-204ENST00000424702 FBXO40Q9UH90 709 aa8.31□□□□□ -1.08
LSM8-204ENST00000424702 USP17L15C9J2P7 530 aa8.31□□□□□ -1.08
LSM8-204ENST00000424702 USP17L13C9JLJ4 530 aa8.31□□□□□ -1.08
LSM8-204ENST00000424702 USP17L11C9JVI0 530 aa8.31□□□□□ -1.08
LSM8-204ENST00000424702 USP17L18D6R9N7 530 aa8.31□□□□□ -1.08
LSM8-204ENST00000424702 USP17L22D6RA61 530 aa8.31□□□□□ -1.08
LSM8-204ENST00000424702 USP17L17D6RBQ6 530 aa8.31□□□□□ -1.08
LSM8-204ENST00000424702 USP17L19D6RCP7 530 aa8.31□□□□□ -1.08
LSM8-204ENST00000424702 USP17L20D6RJB6 530 aa8.31□□□□□ -1.08
LSM8-204ENST00000424702 TOMM70O94826 608 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 140.9 ms