RNA–Protein interactions for RNA: ENST00000424634.5

NUP50-207, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-207ENST00000424634 COG2Q14746 738 aa22.14■■□□□ 1.13
NUP50-207ENST00000424634 GIMAP6Q6P9H5 292 aa22.14■■□□□ 1.13
NUP50-207ENST00000424634 CCAR1Q8IX12 1150 aaKnown RBP22.14■■□□□ 1.13
NUP50-207ENST00000424634 CRISPLD2Q9H0B8 497 aa22.14■■□□□ 1.13
NUP50-207ENST00000424634 EPB41L4AQ9HCS5 686 aaPredicted RBP22.14■■□□□ 1.13
NUP50-207ENST00000424634 TFRCP02786 760 aaKnown RBP22.13■■□□□ 1.13
NUP50-207ENST00000424634 EEF2P13639 858 aaKnown RBP22.13■■□□□ 1.13
NUP50-207ENST00000424634 SPICE1Q8N0Z3 855 aa22.13■■□□□ 1.13
NUP50-207ENST00000424634 STK11IPQ8N1F8 1099 aa22.13■■□□□ 1.13
NUP50-207ENST00000424634 SOCS4Q8WXH5 440 aa22.13■■□□□ 1.13
NUP50-207ENST00000424634 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.13■■□□□ 1.131e-8■■■■■ 27
NUP50-207ENST00000424634 ARHGEF10LQ9HCE6 1279 aa22.13■■□□□ 1.13
NUP50-207ENST00000424634 MINDY4BA8MYZ0 360 aa22.12■■□□□ 1.13
NUP50-207ENST00000424634 CCL14Q16627 93 aa22.12■■□□□ 1.13
NUP50-207ENST00000424634 TANGO6Q9C0B7 1094 aa22.12■■□□□ 1.13
NUP50-207ENST00000424634 VCPKMTQ9H867 229 aa22.12■■□□□ 1.13
NUP50-207ENST00000424634 HOXC10Q9NYD6 342 aa22.12■■□□□ 1.13
NUP50-207ENST00000424634 RPTORQ8N122 1335 aa22.11■■□□□ 1.13
NUP50-207ENST00000424634 PATL2C9JE40 543 aaKnown RBP22.11■■□□□ 1.13
NUP50-207ENST00000424634 FARP2O94887 1054 aaPredicted RBP22.11■■□□□ 1.13
NUP50-207ENST00000424634 RASA1P20936 1047 aa22.11■■□□□ 1.13
NUP50-207ENST00000424634 CCNA1P78396 465 aa22.11■■□□□ 1.13
NUP50-207ENST00000424634 MAP3K21Q5TCX8 1036 aa22.11■■□□□ 1.13
NUP50-207ENST00000424634 LPAR1Q92633 364 aa22.11■■□□□ 1.13
NUP50-207ENST00000424634 GCC1Q96CN9 775 aa22.11■■□□□ 1.13
NUP50-207ENST00000424634 FSD1Q9BTV5 496 aa22.11■■□□□ 1.13
NUP50-207ENST00000424634 KANSL2Q9H9L4 492 aa22.11■■□□□ 1.13
NUP50-207ENST00000424634 GREB1LQ9C091 1923 aaPredicted RBP22.11■■□□□ 1.13
NUP50-207ENST00000424634 SLC34A2O95436 690 aa22.1■■□□□ 1.13
NUP50-207ENST00000424634 GNAT2P19087 354 aa22.1■■□□□ 1.13
NUP50-207ENST00000424634 PTPREP23469 700 aa22.1■■□□□ 1.13
NUP50-207ENST00000424634 DSG3P32926 999 aa22.1■■□□□ 1.13
NUP50-207ENST00000424634 RGS2P41220 211 aa22.1■■□□□ 1.13
NUP50-207ENST00000424634 ATP2B2Q01814 1243 aa22.1■■□□□ 1.13
NUP50-207ENST00000424634 ZMYM1Q5SVZ6 1142 aa22.1■■□□□ 1.13
NUP50-207ENST00000424634 IFNL3Q8IZI9 196 aa22.1■■□□□ 1.13
NUP50-207ENST00000424634 HMX1Q9NP08 348 aaPredicted RBP22.1■■□□□ 1.13
NUP50-207ENST00000424634 STAP2Q9UGK3 403 aa22.1■■□□□ 1.13
NUP50-207ENST00000424634 PARP14Q460N5 1801 aa22.1■■□□□ 1.13
NUP50-207ENST00000424634 APPP05067 770 aa22.09■■□□□ 1.13
NUP50-207ENST00000424634 CACNB2Q08289 660 aaPredicted RBP22.09■■□□□ 1.13
NUP50-207ENST00000424634 MAP2K5Q13163 448 aa22.09■■□□□ 1.13
NUP50-207ENST00000424634 LRRFIP1Q32MZ4 808 aaKnown RBP22.09■■□□□ 1.13
NUP50-207ENST00000424634 WDR78Q5VTH9 848 aa22.09■■□□□ 1.13
NUP50-207ENST00000424634 MOV10L1Q9BXT6 1211 aaKnown RBP22.09■■□□□ 1.13
NUP50-207ENST00000424634 SH2D4AQ9H788 454 aa22.09■■□□□ 1.13
NUP50-207ENST00000424634 ROBO3Q96MS0 1386 aa22.09■■□□□ 1.13
NUP50-207ENST00000424634 A0A0G2JMZ2 1700 aa22.09■■□□□ 1.13
NUP50-207ENST00000424634 SLC15A5A6NIM6 579 aa22.08■■□□□ 1.13
NUP50-207ENST00000424634 H0YGN5 161 aa22.08■■□□□ 1.13
NUP50-207ENST00000424634 PRKAR2AP13861 404 aaKnown RBP22.08■■□□□ 1.13
NUP50-207ENST00000424634 TDO2P48775 406 aa22.08■■□□□ 1.13
NUP50-207ENST00000424634 PDE1AP54750 535 aa22.08■■□□□ 1.13
NUP50-207ENST00000424634 TRMT44Q8IYL2 757 aaKnown RBP22.08■■□□□ 1.13
NUP50-207ENST00000424634 DPF3Q92784 378 aa22.08■■□□□ 1.13
NUP50-207ENST00000424634 MKNK2Q9HBH9 465 aa22.08■■□□□ 1.13
NUP50-207ENST00000424634 CWC22Q9HCG8 908 aaKnown RBP22.08■■□□□ 1.13
NUP50-207ENST00000424634 FLRT1Q9NZU1 646 aa22.08■■□□□ 1.13
NUP50-207ENST00000424634 WDR46O15213 610 aaKnown RBP22.07■■□□□ 1.12
NUP50-207ENST00000424634 FLOT1O75955 427 aa22.07■■□□□ 1.12
NUP50-207ENST00000424634 ZKSCAN1P17029 563 aaPredicted RBP22.07■■□□□ 1.12
NUP50-207ENST00000424634 CAPN2P17655 700 aa22.07■■□□□ 1.12
NUP50-207ENST00000424634 GRB14Q14449 540 aa22.07■■□□□ 1.12
NUP50-207ENST00000424634 ATG4CQ96DT6 458 aa22.07■■□□□ 1.12
NUP50-207ENST00000424634 APBA2Q99767 749 aa22.07■■□□□ 1.12
NUP50-207ENST00000424634 SPATC1LQ9H0A9 340 aa22.07■■□□□ 1.12
NUP50-207ENST00000424634 ZBTB47Q9UFB7 747 aaPredicted RBP22.07■■□□□ 1.12
NUP50-207ENST00000424634 FOXP2O15409 715 aa22.06■■□□□ 1.12
NUP50-207ENST00000424634 PRDM1O75626 825 aa22.06■■□□□ 1.12
NUP50-207ENST00000424634 MNX1P50219 401 aaPredicted RBP22.06■■□□□ 1.12
NUP50-207ENST00000424634 CCDC129Q6ZRS4 1044 aa22.06■■□□□ 1.12
NUP50-207ENST00000424634 NPLOC4Q8TAT6 608 aa22.06■■□□□ 1.12
NUP50-207ENST00000424634 DIS3LQ8TF46 1054 aaKnown RBP22.06■■□□□ 1.12
NUP50-207ENST00000424634 PAWRQ96IZ0 340 aaKnown RBP22.06■■□□□ 1.12
NUP50-207ENST00000424634 FBXO28Q9NVF7 368 aa22.06■■□□□ 1.12
NUP50-207ENST00000424634 COL11A1P12107 1806 aaPredicted RBP22.06■■□□□ 1.12
NUP50-207ENST00000424634 IGKV6D-41A0A0C4DH26 115 aa22.05■■□□□ 1.12
NUP50-207ENST00000424634 CCND3P30281 292 aaPredicted RBP22.05■■□□□ 1.12
NUP50-207ENST00000424634 AAMPQ13685 434 aa22.05■■□□□ 1.12
NUP50-207ENST00000424634 MB21D1Q8N884 522 aa22.05■■□□□ 1.12
NUP50-207ENST00000424634 EXOC6Q8TAG9 804 aa22.05■■□□□ 1.12
NUP50-207ENST00000424634 HTATIP2Q9BUP3 242 aa22.05■■□□□ 1.12
NUP50-207ENST00000424634 ADAMTS5Q9UNA0 930 aa22.05■■□□□ 1.12
NUP50-207ENST00000424634 IGHDP01880 384 aa22.04■■□□□ 1.12
NUP50-207ENST00000424634 HOXC6P09630 235 aa22.04■■□□□ 1.12
NUP50-207ENST00000424634 ERCC3P19447 782 aa22.04■■□□□ 1.12
NUP50-207ENST00000424634 SAMD1Q6SPF0 538 aaPredicted RBP22.04■■□□□ 1.12
NUP50-207ENST00000424634 SMC5Q8IY18 1101 aa22.04■■□□□ 1.12
NUP50-207ENST00000424634 EVI5LQ96CN4 794 aa22.04■■□□□ 1.12
NUP50-207ENST00000424634 LNPKQ9C0E8 428 aa22.04■■□□□ 1.12
NUP50-207ENST00000424634 GOPCQ9HD26 462 aa22.04■■□□□ 1.12
NUP50-207ENST00000424634 NYAP2Q9P242 653 aa22.04■■□□□ 1.12
NUP50-207ENST00000424634 OGDHLQ9ULD0 1010 aa22.04■■□□□ 1.12
NUP50-207ENST00000424634 IVNS1ABPQ9Y6Y0 642 aa22.04■■□□□ 1.12
NUP50-207ENST00000424634 ZNFX1Q9P2E3 1918 aaKnown RBP22.04■■□□□ 1.12
NUP50-207ENST00000424634 IGHA2P01877 340 aa22.03■■□□□ 1.12
NUP50-207ENST00000424634 PLS1Q14651 629 aa22.03■■□□□ 1.12
NUP50-207ENST00000424634 TMEM132BQ14DG7 1078 aa22.03■■□□□ 1.12
NUP50-207ENST00000424634 HABP4Q5JVS0 413 aaKnown RBP22.03■■□□□ 1.12
NUP50-207ENST00000424634 FAM83BQ5T0W9 1011 aa22.03■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms