RNA–Protein interactions for RNA: ENST00000423701.6

SEC22C-207, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 1 (best) BASIC

Gene SEC22C, Length 1,458 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-207ENST00000423701 CTCFP49711 727 aaPredicted RBP25.57■■□□□ 1.68
SEC22C-207ENST00000423701 TRDNQ13061 729 aa25.57■■□□□ 1.68
SEC22C-207ENST00000423701 PABPC4Q13310 644 aaKnown RBP eCLIP25.57■■□□□ 1.683e-6■■■■□ 21.4
SEC22C-207ENST00000423701 PPP4R3BQ5MIZ7 849 aa25.57■■□□□ 1.68
SEC22C-207ENST00000423701 LRRC47Q8N1G4 583 aaKnown RBP25.57■■□□□ 1.68
SEC22C-207ENST00000423701 LPAR1Q92633 364 aa25.57■■□□□ 1.68
SEC22C-207ENST00000423701 MKL1Q969V6 931 aa25.57■■□□□ 1.68
SEC22C-207ENST00000423701 ZSWIM5Q9P217 1185 aa25.57■■□□□ 1.68
SEC22C-207ENST00000423701 HOXA7P31268 230 aaPredicted RBP25.56■■□□□ 1.68
SEC22C-207ENST00000423701 SPICE1Q8N0Z3 855 aa25.56■■□□□ 1.68
SEC22C-207ENST00000423701 ZKSCAN3Q9BRR0 538 aa25.56■■□□□ 1.68
SEC22C-207ENST00000423701 GOPCQ9HD26 462 aa25.56■■□□□ 1.68
SEC22C-207ENST00000423701 PNMA3Q9UL41 463 aa25.56■■□□□ 1.68
SEC22C-207ENST00000423701 SYNPO2Q9UMS6 1093 aa25.56■■□□□ 1.68
SEC22C-207ENST00000423701 RNF20Q5VTR2 975 aa25.55■■□□□ 1.68
SEC22C-207ENST00000423701 ASCC2Q9H1I8 757 aaPredicted RBP25.55■■□□□ 1.68
SEC22C-207ENST00000423701 ADGRA2Q96PE1 1338 aa25.54■■□□□ 1.68
SEC22C-207ENST00000423701 TLR2O60603 784 aa25.54■■□□□ 1.68
SEC22C-207ENST00000423701 RALYLQ86SE5 291 aaKnown RBP25.54■■□□□ 1.68
SEC22C-207ENST00000423701 IQCA1Q86XH1 822 aa25.54■■□□□ 1.68
SEC22C-207ENST00000423701 NCOA7Q8NI08 942 aa25.54■■□□□ 1.68
SEC22C-207ENST00000423701 RPAP3Q9H6T3 665 aaPredicted RBP25.54■■□□□ 1.68
SEC22C-207ENST00000423701 RAD21O60216 631 aa25.53■■□□□ 1.68
SEC22C-207ENST00000423701 OSBPP22059 807 aa25.53■■□□□ 1.68
SEC22C-207ENST00000423701 LBX1P52954 281 aa25.53■■□□□ 1.68
SEC22C-207ENST00000423701 RCSD1Q6JBY9 416 aa25.53■■□□□ 1.68
SEC22C-207ENST00000423701 CYB5R4Q7L1T6 521 aa25.53■■□□□ 1.68
SEC22C-207ENST00000423701 USP17L15C9J2P7 530 aa25.53■■□□□ 1.68
SEC22C-207ENST00000423701 USP17L13C9JLJ4 530 aa25.53■■□□□ 1.68
SEC22C-207ENST00000423701 USP17L11C9JVI0 530 aa25.53■■□□□ 1.68
SEC22C-207ENST00000423701 USP17L18D6R9N7 530 aa25.53■■□□□ 1.68
SEC22C-207ENST00000423701 USP17L22D6RA61 530 aa25.53■■□□□ 1.68
SEC22C-207ENST00000423701 USP17L17D6RBQ6 530 aa25.53■■□□□ 1.68
SEC22C-207ENST00000423701 USP17L19D6RCP7 530 aa25.53■■□□□ 1.68
SEC22C-207ENST00000423701 USP17L20D6RJB6 530 aa25.53■■□□□ 1.68
SEC22C-207ENST00000423701 F5H6K3 240 aa25.53■■□□□ 1.68
SEC22C-207ENST00000423701 WDR46O15213 610 aaKnown RBP25.53■■□□□ 1.68
SEC22C-207ENST00000423701 NDUFB10O96000 172 aa25.53■■□□□ 1.68
SEC22C-207ENST00000423701 IRX3P78415 501 aaPredicted RBP25.53■■□□□ 1.68
SEC22C-207ENST00000423701 KLRC3Q07444 240 aa25.53■■□□□ 1.68
SEC22C-207ENST00000423701 USP17L24Q0WX57 530 aa25.53■■□□□ 1.68
SEC22C-207ENST00000423701 GMCL1P1Q8NEA9 526 aa25.53■■□□□ 1.68
SEC22C-207ENST00000423701 SMCR8Q8TEV9 937 aaPredicted RBP25.53■■□□□ 1.68
SEC22C-207ENST00000423701 GPR25O00155 361 aa25.52■■□□□ 1.68
SEC22C-207ENST00000423701 EPB41L2O43491 1005 aaKnown RBP25.52■■□□□ 1.68
SEC22C-207ENST00000423701 HSPA4P34932 840 aa25.52■■□□□ 1.68
SEC22C-207ENST00000423701 NOM1Q5C9Z4 860 aaKnown RBP25.52■■□□□ 1.68
SEC22C-207ENST00000423701 CATSPERGQ6ZRH7 1159 aa25.52■■□□□ 1.68
SEC22C-207ENST00000423701 MB21D2Q8IYB1 491 aaPredicted RBP25.52■■□□□ 1.68
SEC22C-207ENST00000423701 RASEFQ8IZ41 740 aa25.52■■□□□ 1.68
SEC22C-207ENST00000423701 TTC14Q96N46 770 aa25.52■■□□□ 1.68
SEC22C-207ENST00000423701 ZSCAN10Q96SZ4 725 aaPredicted RBP25.52■■□□□ 1.68
SEC22C-207ENST00000423701 TNKSO95271 1327 aa25.51■■□□□ 1.67
SEC22C-207ENST00000423701 TMEM47Q9BQJ4 181 aa25.51■■□□□ 1.67
SEC22C-207ENST00000423701 UBAC1Q9BSL1 405 aa25.51■■□□□ 1.67
SEC22C-207ENST00000423701 TANGO6Q9C0B7 1094 aa25.51■■□□□ 1.67
SEC22C-207ENST00000423701 TOP1P11387 765 aaKnown RBP25.5■■□□□ 1.67
SEC22C-207ENST00000423701 ZKSCAN1P17029 563 aaPredicted RBP25.5■■□□□ 1.67
SEC22C-207ENST00000423701 TSGA10IPQ3SY00 556 aa25.5■■□□□ 1.67
SEC22C-207ENST00000423701 CCDC178Q5BJE1 867 aa25.5■■□□□ 1.67
SEC22C-207ENST00000423701 DGKHQ86XP1 1220 aa25.5■■□□□ 1.67
SEC22C-207ENST00000423701 ENAHQ8N8S7 591 aaPredicted RBP25.5■■□□□ 1.67
SEC22C-207ENST00000423701 KCNB2Q92953 911 aa25.5■■□□□ 1.67
SEC22C-207ENST00000423701 P2RX7Q99572 595 aaKnown RBP25.5■■□□□ 1.67
SEC22C-207ENST00000423701 USP26Q9BXU7 913 aa25.5■■□□□ 1.67
SEC22C-207ENST00000423701 CPA4Q9UI42 421 aa25.5■■□□□ 1.67
SEC22C-207ENST00000423701 COL9A3Q14050 684 aaPredicted RBP25.49■■□□□ 1.67
SEC22C-207ENST00000423701 FAM83BQ5T0W9 1011 aa25.49■■□□□ 1.67
SEC22C-207ENST00000423701 C17orf99Q6UX52 265 aa25.49■■□□□ 1.67
SEC22C-207ENST00000423701 ZNF296Q8WUU4 475 aaPredicted RBP25.49■■□□□ 1.67
SEC22C-207ENST00000423701 NUP88Q99567 741 aaPredicted RBP25.49■■□□□ 1.67
SEC22C-207ENST00000423701 PARP14Q460N5 1801 aa25.49■■□□□ 1.67
SEC22C-207ENST00000423701 RLFQ13129 1914 aa25.48■■□□□ 1.67
SEC22C-207ENST00000423701 ANTXR2P58335 489 aa25.48■■□□□ 1.67
SEC22C-207ENST00000423701 HERVK_113P62684 666 aa25.48■■□□□ 1.67
SEC22C-207ENST00000423701 C8orf34Q49A92 452 aa25.48■■□□□ 1.67
SEC22C-207ENST00000423701 SLFN13Q68D06 897 aa25.48■■□□□ 1.67
SEC22C-207ENST00000423701 CHST3Q7LGC8 479 aa25.48■■□□□ 1.67
SEC22C-207ENST00000423701 BCRP11274 1271 aa25.47■■□□□ 1.67
SEC22C-207ENST00000423701 ADCK5Q3MIX3 580 aa25.47■■□□□ 1.67
SEC22C-207ENST00000423701 RASGRP2Q7LDG7 609 aa25.47■■□□□ 1.67
SEC22C-207ENST00000423701 ANKS1AQ92625 1134 aa25.47■■□□□ 1.67
SEC22C-207ENST00000423701 SEC23AQ15436 765 aa25.47■■□□□ 1.67
SEC22C-207ENST00000423701 GMCL1Q96IK5 515 aa25.47■■□□□ 1.67
SEC22C-207ENST00000423701 SNX14Q9Y5W7 946 aa25.47■■□□□ 1.67
SEC22C-207ENST00000423701 A0A0G2JMZ2 1700 aa25.46■■□□□ 1.67
SEC22C-207ENST00000423701 SPDYE16A6NNV3 312 aaPredicted RBP25.46■■□□□ 1.67
SEC22C-207ENST00000423701 FKTNO75072 461 aa25.46■■□□□ 1.67
SEC22C-207ENST00000423701 FLOT1O75955 427 aa25.46■■□□□ 1.67
SEC22C-207ENST00000423701 GCLCP48506 637 aaPredicted RBP25.46■■□□□ 1.67
SEC22C-207ENST00000423701 KRT32Q14532 448 aa25.46■■□□□ 1.67
SEC22C-207ENST00000423701 POTEEQ6S8J3 1075 aa25.46■■□□□ 1.67
SEC22C-207ENST00000423701 ANKRD13CQ8N6S4 541 aa25.46■■□□□ 1.67
SEC22C-207ENST00000423701 CHMP4CQ96CF2 233 aa25.46■■□□□ 1.67
SEC22C-207ENST00000423701 NEK1Q96PY6 1258 aa25.46■■□□□ 1.67
SEC22C-207ENST00000423701 MTMR7Q9Y216 660 aa25.46■■□□□ 1.67
SEC22C-207ENST00000423701 IFIT3O14879 490 aaKnown RBP25.45■■□□□ 1.66
SEC22C-207ENST00000423701 MCCP23508 829 aa25.45■■□□□ 1.66
SEC22C-207ENST00000423701 SP3Q02447 781 aa25.45■■□□□ 1.66
SEC22C-207ENST00000423701 COG2Q14746 738 aa25.45■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms