RNA–Protein interactions for RNA: ENST00000423214.1

COL18A1-205, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 5

Gene COL18A1, Length 839 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-205ENST00000423214 LAMA3Q16787 3333 aa19.48■□□□□ 0.71
COL18A1-205ENST00000423214 CYP2D6P10635 497 aa19.48■□□□□ 0.71
COL18A1-205ENST00000423214 PTPREP23469 700 aa19.48■□□□□ 0.71
COL18A1-205ENST00000423214 ADD2P35612 726 aa19.48■□□□□ 0.71
COL18A1-205ENST00000423214 MNX1P50219 401 aaPredicted RBP19.48■□□□□ 0.71
COL18A1-205ENST00000423214 SLC44A5Q8NCS7 719 aa19.48■□□□□ 0.71
COL18A1-205ENST00000423214 SH2D4AQ9H788 454 aa19.48■□□□□ 0.71
COL18A1-205ENST00000423214 ARHGEF10LQ9HCE6 1279 aa19.48■□□□□ 0.71
COL18A1-205ENST00000423214 GREB1LQ9C091 1923 aaPredicted RBP19.48■□□□□ 0.71
COL18A1-205ENST00000423214 PFASO15067 1338 aa19.48■□□□□ 0.71
COL18A1-205ENST00000423214 ATP5JP18859 108 aa19.47■□□□□ 0.71
COL18A1-205ENST00000423214 ICA1Q05084 483 aa19.47■□□□□ 0.71
COL18A1-205ENST00000423214 GRB14Q14449 540 aa19.47■□□□□ 0.71
COL18A1-205ENST00000423214 ATP8A2Q9NTI2 1148 aa19.47■□□□□ 0.71
COL18A1-205ENST00000423214 RCAN3Q9UKA8 241 aa19.47■□□□□ 0.71
COL18A1-205ENST00000423214 A0A1W2PRG0 241 aa19.46■□□□□ 0.71
COL18A1-205ENST00000423214 SYN1P17600 705 aa19.46■□□□□ 0.71
COL18A1-205ENST00000423214 ATP2B2Q01814 1243 aa19.46■□□□□ 0.71
COL18A1-205ENST00000423214 COG2Q14746 738 aa19.46■□□□□ 0.71
COL18A1-205ENST00000423214 CNGA1P29973 690 aa19.45■□□□□ 0.7
COL18A1-205ENST00000423214 ZSCAN25Q6NSZ9 544 aa19.45■□□□□ 0.7
COL18A1-205ENST00000423214 LPAR1Q92633 364 aa19.45■□□□□ 0.7
COL18A1-205ENST00000423214 DYNLL2Q96FJ2 89 aa19.45■□□□□ 0.7
COL18A1-205ENST00000423214 HAUS7Q99871 368 aa19.45■□□□□ 0.7
COL18A1-205ENST00000423214 GDF15Q99988 308 aa19.45■□□□□ 0.7
COL18A1-205ENST00000423214 LRRCC1Q9C099 1032 aa19.45■□□□□ 0.7
COL18A1-205ENST00000423214 HOXC10Q9NYD6 342 aa19.45■□□□□ 0.7
COL18A1-205ENST00000423214 FLRT1Q9NZU1 646 aa19.45■□□□□ 0.7
COL18A1-205ENST00000423214 LTBP2Q14767 1821 aa19.44■□□□□ 0.7
COL18A1-205ENST00000423214 PRKAB2O43741 272 aa19.44■□□□□ 0.7
COL18A1-205ENST00000423214 MSCO60682 206 aa19.44■□□□□ 0.7
COL18A1-205ENST00000423214 FLOT1O75955 427 aa19.44■□□□□ 0.7
COL18A1-205ENST00000423214 AKR1B1P15121 316 aa19.44■□□□□ 0.7
COL18A1-205ENST00000423214 SLFNL1Q499Z3 407 aa19.44■□□□□ 0.7
COL18A1-205ENST00000423214 LHX8Q68G74 356 aa19.44■□□□□ 0.7
COL18A1-205ENST00000423214 DPP9Q86TI2 863 aa19.44■□□□□ 0.7
COL18A1-205ENST00000423214 CLEC10AQ8IUN9 316 aa19.44■□□□□ 0.7
COL18A1-205ENST00000423214 MB21D1Q8N884 522 aa19.44■□□□□ 0.7
COL18A1-205ENST00000423214 SPATC1LQ9H0A9 340 aa19.44■□□□□ 0.7
COL18A1-205ENST00000423214 HOXC6P09630 235 aa19.43■□□□□ 0.7
COL18A1-205ENST00000423214 COL6A1P12109 1028 aa19.43■□□□□ 0.7
COL18A1-205ENST00000423214 ADORA2AP29274 412 aa19.43■□□□□ 0.7
COL18A1-205ENST00000423214 BMP8BP34820 402 aa19.43■□□□□ 0.7
COL18A1-205ENST00000423214 PLS1Q14651 629 aa19.43■□□□□ 0.7
COL18A1-205ENST00000423214 SAMD1Q6SPF0 538 aaPredicted RBP19.43■□□□□ 0.7
COL18A1-205ENST00000423214 SPICE1Q8N0Z3 855 aa19.43■□□□□ 0.7
COL18A1-205ENST00000423214 NPLOC4Q8TAT6 608 aa19.43■□□□□ 0.7
COL18A1-205ENST00000423214 CCDC17Q96LX7 622 aa19.43■□□□□ 0.7
COL18A1-205ENST00000423214 MOV10L1Q9BXT6 1211 aaKnown RBP19.43■□□□□ 0.7
COL18A1-205ENST00000423214 DDX20Q9UHI6 824 aaKnown RBP19.43■□□□□ 0.7
COL18A1-205ENST00000423214 DNAH12Q6ZR08 3092 aa19.42■□□□□ 0.7
COL18A1-205ENST00000423214 SOX1O00570 391 aaPredicted RBP19.42■□□□□ 0.7
COL18A1-205ENST00000423214 CYP2C19P33261 490 aa19.42■□□□□ 0.7
COL18A1-205ENST00000423214 MAGEA10P43363 369 aaPredicted RBP19.42■□□□□ 0.7
COL18A1-205ENST00000423214 UBE3CQ15386 1083 aa19.42■□□□□ 0.7
COL18A1-205ENST00000423214 C16orf86Q6ZW13 317 aa19.42■□□□□ 0.7
COL18A1-205ENST00000423214 SHCBP1Q8NEM2 672 aa19.42■□□□□ 0.7
COL18A1-205ENST00000423214 LRCH3Q96II8 777 aa19.42■□□□□ 0.7
COL18A1-205ENST00000423214 VCPKMTQ9H867 229 aa19.42■□□□□ 0.7
COL18A1-205ENST00000423214 SLC5A4Q9NY91 659 aa19.42■□□□□ 0.7
COL18A1-205ENST00000423214 TMX2Q9Y320 296 aa19.42■□□□□ 0.7
COL18A1-205ENST00000423214 SLC4A4Q9Y6R1 1079 aa19.42■□□□□ 0.7
COL18A1-205ENST00000423214 SMCHD1A6NHR9 2005 aa19.41■□□□□ 0.7
COL18A1-205ENST00000423214 CYP2D7A0A087X1C5 515 aa19.41■□□□□ 0.7
COL18A1-205ENST00000423214 USP17L12C9JPN9 530 aa19.41■□□□□ 0.7
COL18A1-205ENST00000423214 USP17L21D6R901 530 aa19.41■□□□□ 0.7
COL18A1-205ENST00000423214 WDR46O15213 610 aaKnown RBP19.41■□□□□ 0.7
COL18A1-205ENST00000423214 STRNO43815 780 aa19.41■□□□□ 0.7
COL18A1-205ENST00000423214 ERCC3P19447 782 aa19.41■□□□□ 0.7
COL18A1-205ENST00000423214 CDK8P49336 464 aa19.41■□□□□ 0.7
COL18A1-205ENST00000423214 LRRC26Q2I0M4 334 aa19.41■□□□□ 0.7
COL18A1-205ENST00000423214 C12orf60Q5U649 245 aa19.41■□□□□ 0.7
COL18A1-205ENST00000423214 NCAPG2Q86XI2 1143 aa19.41■□□□□ 0.7
COL18A1-205ENST00000423214 DSG3P32926 999 aa19.4■□□□□ 0.7
COL18A1-205ENST00000423214 KIAA1755Q5JYT7 1200 aa19.4■□□□□ 0.7
COL18A1-205ENST00000423214 ATG4CQ96DT6 458 aa19.4■□□□□ 0.7
COL18A1-205ENST00000423214 GPATCH3Q96I76 525 aa19.4■□□□□ 0.7
COL18A1-205ENST00000423214 UBE2OQ9C0C9 1292 aaKnown RBP19.4■□□□□ 0.7
COL18A1-205ENST00000423214 MROH8Q9H579 483 aa19.4■□□□□ 0.7
COL18A1-205ENST00000423214 ARPP21Q9UBL0 812 aaPredicted RBP19.4■□□□□ 0.7
COL18A1-205ENST00000423214 RAD21O60216 631 aa19.39■□□□□ 0.69
COL18A1-205ENST00000423214 SMARCA5O60264 1052 aaPredicted RBP19.39■□□□□ 0.69
COL18A1-205ENST00000423214 CHGBP05060 677 aa19.39■□□□□ 0.69
COL18A1-205ENST00000423214 CYBAP13498 195 aa19.39■□□□□ 0.69
COL18A1-205ENST00000423214 OLFML2BQ68BL8 750 aa19.39■□□□□ 0.69
COL18A1-205ENST00000423214 TDHQ8IZJ6 230 aa19.39■□□□□ 0.69
COL18A1-205ENST00000423214 SENP6Q9GZR1 1112 aaPredicted RBP19.39■□□□□ 0.69
COL18A1-205ENST00000423214 GOPCQ9HD26 462 aa19.39■□□□□ 0.69
COL18A1-205ENST00000423214 DNM1LO00429 736 aa19.38■□□□□ 0.69
COL18A1-205ENST00000423214 C20orf194Q5TEA3 1177 aa19.38■□□□□ 0.69
COL18A1-205ENST00000423214 PUS7LQ9H0K6 701 aaKnown RBP19.38■□□□□ 0.69
COL18A1-205ENST00000423214 ECHDC1Q9NTX5 307 aa19.38■□□□□ 0.69
COL18A1-205ENST00000423214 MCM3APO60318 1980 aa19.37■□□□□ 0.69
COL18A1-205ENST00000423214 KBTBD13C9JR72 458 aa19.37■□□□□ 0.69
COL18A1-205ENST00000423214 SMIM22K7EJ46 135 aa19.37■□□□□ 0.69
COL18A1-205ENST00000423214 EEF2P13639 858 aaKnown RBP19.37■□□□□ 0.69
COL18A1-205ENST00000423214 CTR9Q6PD62 1173 aa19.37■□□□□ 0.69
COL18A1-205ENST00000423214 ABRAQ8N0Z2 381 aa19.37■□□□□ 0.69
COL18A1-205ENST00000423214 TRPV1Q8NER1 839 aa19.37■□□□□ 0.69
COL18A1-205ENST00000423214 KANSL2Q9H9L4 492 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 104.9 ms