RNA–Protein interactions for RNA: ENST00000422242.1

RAB5A-203, Transcript of RAB5A, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB5A, Length 1,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5A-203ENST00000422242 PLAURQ03405 335 aa13.64□□□□□ -0.23
RAB5A-203ENST00000422242 SPEM2Q0P670 501 aa13.64□□□□□ -0.23
RAB5A-203ENST00000422242 CAMK2GQ13555 558 aaPredicted RBP13.64□□□□□ -0.23
RAB5A-203ENST00000422242 FAM196AQ6ZSG2 479 aa13.64□□□□□ -0.23
RAB5A-203ENST00000422242 TTC5Q8N0Z6 440 aa13.64□□□□□ -0.23
RAB5A-203ENST00000422242 GOLM1Q8NBJ4 401 aa13.64□□□□□ -0.23
RAB5A-203ENST00000422242 PIGBQ92521 554 aa13.64□□□□□ -0.23
RAB5A-203ENST00000422242 CHMP4AQ9BY43 222 aa13.64□□□□□ -0.23
RAB5A-203ENST00000422242 HCN2Q9UL51 889 aa13.64□□□□□ -0.23
RAB5A-203ENST00000422242 STRIP2Q9ULQ0 834 aa13.64□□□□□ -0.23
RAB5A-203ENST00000422242 PDZRN3Q9UPQ7 1066 aa13.64□□□□□ -0.23
RAB5A-203ENST00000422242 MRPL42Q9Y6G3 142 aaKnown RBP13.64□□□□□ -0.23
RAB5A-203ENST00000422242 LY75O60449 1722 aa13.64□□□□□ -0.23
RAB5A-203ENST00000422242 AVPP01185 164 aa13.64□□□□□ -0.23
RAB5A-203ENST00000422242 LAMC2Q13753 1193 aa13.64□□□□□ -0.23
RAB5A-203ENST00000422242 UBAP2LQ14157 1087 aaKnown RBP13.64□□□□□ -0.23
RAB5A-203ENST00000422242 RAB44Q7Z6P3 723 aaPredicted RBP13.64□□□□□ -0.23
RAB5A-203ENST00000422242 CPLX3Q8WVH0 158 aa13.64□□□□□ -0.23
RAB5A-203ENST00000422242 BHMTQ93088 406 aa13.64□□□□□ -0.23
RAB5A-203ENST00000422242 ENC1O14682 589 aa13.63□□□□□ -0.23
RAB5A-203ENST00000422242 MAP3K6O95382 1288 aa13.63□□□□□ -0.23
RAB5A-203ENST00000422242 ITPKAP23677 461 aa13.63□□□□□ -0.23
RAB5A-203ENST00000422242 LMNB2Q03252 620 aa13.63□□□□□ -0.23
RAB5A-203ENST00000422242 TWISTNBQ3B726 338 aaPredicted RBP13.63□□□□□ -0.23
RAB5A-203ENST00000422242 TTBK2Q6IQ55 1244 aa13.63□□□□□ -0.23
RAB5A-203ENST00000422242 C8orf58Q8NAV2 365 aa13.63□□□□□ -0.23
RAB5A-203ENST00000422242 SLC30A3Q99726 388 aa13.63□□□□□ -0.23
RAB5A-203ENST00000422242 NUCKS1Q9H1E3 243 aaKnown RBP13.63□□□□□ -0.23
RAB5A-203ENST00000422242 MARK1Q9P0L2 795 aa13.63□□□□□ -0.23
RAB5A-203ENST00000422242 RGPD3A6NKT7 1758 aaPredicted RBP13.63□□□□□ -0.23
RAB5A-203ENST00000422242 RGPD4Q7Z3J3 1758 aa13.63□□□□□ -0.23
RAB5A-203ENST00000422242 VAMP4O75379 141 aa13.62□□□□□ -0.23
RAB5A-203ENST00000422242 CRKP46108 304 aa13.62□□□□□ -0.23
RAB5A-203ENST00000422242 APOBRQ0VD83 1088 aa13.62□□□□□ -0.23
RAB5A-203ENST00000422242 COL9A2Q14055 689 aaPredicted RBP13.62□□□□□ -0.23
RAB5A-203ENST00000422242 TCEAL1Q15170 157 aa13.62□□□□□ -0.23
RAB5A-203ENST00000422242 DHX32Q7L7V1 743 aaKnown RBP13.62□□□□□ -0.23
RAB5A-203ENST00000422242 NECAB3Q96P71 396 aaPredicted RBP13.62□□□□□ -0.23
RAB5A-203ENST00000422242 FMNL2Q96PY5 1086 aa13.62□□□□□ -0.23
RAB5A-203ENST00000422242 TRIM55Q9BYV6 548 aa13.62□□□□□ -0.23
RAB5A-203ENST00000422242 RCAN3Q9UKA8 241 aa13.62□□□□□ -0.23
RAB5A-203ENST00000422242 TJP1Q07157 1748 aa13.62□□□□□ -0.23
RAB5A-203ENST00000422242 TNS1Q9HBL0 1735 aaKnown RBP13.61□□□□□ -0.23
RAB5A-203ENST00000422242 KCNQ3O43525 872 aa13.61□□□□□ -0.23
RAB5A-203ENST00000422242 HOXD8P13378 290 aaPredicted RBP13.61□□□□□ -0.23
RAB5A-203ENST00000422242 TFE3P19532 575 aaPredicted RBP13.61□□□□□ -0.23
RAB5A-203ENST00000422242 SLC39A6Q13433 755 aa13.61□□□□□ -0.23
RAB5A-203ENST00000422242 ALDH1L2Q3SY69 923 aa13.61□□□□□ -0.23
RAB5A-203ENST00000422242 TSPYL6Q8N831 410 aa13.61□□□□□ -0.23
RAB5A-203ENST00000422242 SMARCC1Q92922 1105 aaPredicted RBP13.61□□□□□ -0.23
RAB5A-203ENST00000422242 SYTL4Q96C24 671 aaPredicted RBP13.61□□□□□ -0.23
RAB5A-203ENST00000422242 ANAPC16Q96DE5 110 aa13.61□□□□□ -0.23
RAB5A-203ENST00000422242 ACSBG1Q96GR2 724 aa13.61□□□□□ -0.23
RAB5A-203ENST00000422242 SEC31BQ9NQW1 1179 aa13.61□□□□□ -0.23
RAB5A-203ENST00000422242 ATG3Q9NT62 314 aa13.61□□□□□ -0.23
RAB5A-203ENST00000422242 COL5A3P25940 1745 aaPredicted RBP13.6□□□□□ -0.23
RAB5A-203ENST00000422242 A0A096LPE4 126 aa13.6□□□□□ -0.23
RAB5A-203ENST00000422242 A0A1W2PPZ6 126 aa13.6□□□□□ -0.23
RAB5A-203ENST00000422242 NFKBIEO00221 500 aa13.6□□□□□ -0.23
RAB5A-203ENST00000422242 BNIP3LO60238 219 aa13.6□□□□□ -0.23
RAB5A-203ENST00000422242 MAN1A2O60476 641 aa13.6□□□□□ -0.23
RAB5A-203ENST00000422242 PAGE1O75459 146 aa13.6□□□□□ -0.23
RAB5A-203ENST00000422242 AGMOQ6ZNB7 445 aa13.6□□□□□ -0.23
RAB5A-203ENST00000422242 NKD1Q969G9 470 aa13.6□□□□□ -0.23
RAB5A-203ENST00000422242 NXPE3Q969Y0 559 aa13.6□□□□□ -0.23
RAB5A-203ENST00000422242 ZNF496Q96IT1 587 aaPredicted RBP13.6□□□□□ -0.23
RAB5A-203ENST00000422242 SPACA7Q96KW9 195 aa13.6□□□□□ -0.23
RAB5A-203ENST00000422242 BHLHE41Q9C0J9 482 aaPredicted RBP13.6□□□□□ -0.23
RAB5A-203ENST00000422242 EP400Q96L91 3159 aa13.6□□□□□ -0.23
RAB5A-203ENST00000422242 KLF4O43474 513 aa13.59□□□□□ -0.23
RAB5A-203ENST00000422242 KCNQ2O43526 872 aa13.59□□□□□ -0.23
RAB5A-203ENST00000422242 SNRPA1P09661 255 aaKnown RBP13.59□□□□□ -0.23
RAB5A-203ENST00000422242 CD33P20138 364 aa13.59□□□□□ -0.23
RAB5A-203ENST00000422242 RARSP54136 660 aaKnown RBP13.59□□□□□ -0.23
RAB5A-203ENST00000422242 PCNX4Q63HM2 1172 aa13.59□□□□□ -0.23
RAB5A-203ENST00000422242 ASAP3Q8TDY4 903 aa13.59□□□□□ -0.23
RAB5A-203ENST00000422242 HNRNPLLQ8WVV9 542 aaKnown RBP13.59□□□□□ -0.23
RAB5A-203ENST00000422242 MKL1Q969V6 931 aa13.59□□□□□ -0.23
RAB5A-203ENST00000422242 SIRPGQ9P1W8 387 aa13.59□□□□□ -0.23
RAB5A-203ENST00000422242 ASAP1Q9ULH1 1129 aa13.59□□□□□ -0.23
RAB5A-203ENST00000422242 TAF1LQ8IZX4 1826 aa13.59□□□□□ -0.23
RAB5A-203ENST00000422242 FAAP100Q0VG06 881 aa13.58□□□□□ -0.24
RAB5A-203ENST00000422242 KRT24Q2M2I5 525 aa13.58□□□□□ -0.24
RAB5A-203ENST00000422242 FAM182BQ5T319 152 aa13.58□□□□□ -0.24
RAB5A-203ENST00000422242 TMEM102Q8N9M5 508 aaPredicted RBP13.58□□□□□ -0.24
RAB5A-203ENST00000422242 ABHD17AQ96GS6 310 aa13.58□□□□□ -0.24
RAB5A-203ENST00000422242 SRPK1Q96SB4 655 aaKnown RBP13.58□□□□□ -0.24
RAB5A-203ENST00000422242 EFCC1Q9HA90 598 aa13.58□□□□□ -0.24
RAB5A-203ENST00000422242 RREB1Q92766 1687 aa13.58□□□□□ -0.24
RAB5A-203ENST00000422242 RNF123Q5XPI4 1314 aa13.58□□□□□ -0.24
RAB5A-203ENST00000422242 PALLDQ8WX93 1383 aa13.57□□□□□ -0.24
RAB5A-203ENST00000422242 RAB33AQ14088 237 aa13.57□□□□□ -0.24
RAB5A-203ENST00000422242 CCDC81Q6ZN84 652 aa13.57□□□□□ -0.24
RAB5A-203ENST00000422242 SRRTQ9BXP5 876 aaKnown RBP13.57□□□□□ -0.24
RAB5A-203ENST00000422242 TEX13AQ9BXU3 409 aaPredicted RBP13.57□□□□□ -0.24
RAB5A-203ENST00000422242 ZNF576Q9H609 170 aa13.57□□□□□ -0.24
RAB5A-203ENST00000422242 NDFIP2Q9NV92 336 aa13.57□□□□□ -0.24
RAB5A-203ENST00000422242 GPN3Q9UHW5 284 aaPredicted RBP13.57□□□□□ -0.24
RAB5A-203ENST00000422242 ELL2O00472 640 aaPredicted RBP13.56□□□□□ -0.24
RAB5A-203ENST00000422242 DBN1Q16643 649 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms