RNA–Protein interactions for RNA: ENST00000420539.1

PTP4A1P1-201, Transcript of protein tyrosine phosphatase type IVA, member 1 pseudogene 1, humanhuman

BASIC

Gene PTP4A1P1, Length 515 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1P1-201ENST00000420539 ARL4DP49703 201 aa6.82□□□□□ -1.32
PTP4A1P1-201ENST00000420539 GEMIN4P57678 1058 aaKnown RBP6.82□□□□□ -1.32
PTP4A1P1-201ENST00000420539 SSRP1Q08945 709 aaKnown RBP6.82□□□□□ -1.32
PTP4A1P1-201ENST00000420539 MTMR1Q13613 665 aa6.82□□□□□ -1.32
PTP4A1P1-201ENST00000420539 CCDC93Q567U6 631 aa6.82□□□□□ -1.32
PTP4A1P1-201ENST00000420539 TTBK2Q6IQ55 1244 aa6.82□□□□□ -1.32
PTP4A1P1-201ENST00000420539 CC2D1AQ6P1N0 951 aaPredicted RBP6.82□□□□□ -1.32
PTP4A1P1-201ENST00000420539 SULF2Q8IWU5 870 aa6.82□□□□□ -1.32
PTP4A1P1-201ENST00000420539 ENAHQ8N8S7 591 aaPredicted RBP6.82□□□□□ -1.32
PTP4A1P1-201ENST00000420539 ZSWIM2Q8NEG5 633 aa6.82□□□□□ -1.32
PTP4A1P1-201ENST00000420539 ZC3H12CQ9C0D7 883 aaKnown RBP6.82□□□□□ -1.32
PTP4A1P1-201ENST00000420539 IFT122Q9HBG6 1241 aa6.82□□□□□ -1.32
PTP4A1P1-201ENST00000420539 PUF60Q9UHX1 559 aaKnown RBP6.82□□□□□ -1.32
PTP4A1P1-201ENST00000420539 ZMYM5Q9UJ78 669 aa6.82□□□□□ -1.32
PTP4A1P1-201ENST00000420539 NOL7Q9UMY1 257 aaKnown RBP6.82□□□□□ -1.32
PTP4A1P1-201ENST00000420539 TLR6Q9Y2C9 796 aa6.82□□□□□ -1.32
PTP4A1P1-201ENST00000420539 CTDP1Q9Y5B0 961 aaPredicted RBP6.82□□□□□ -1.32
PTP4A1P1-201ENST00000420539 GSG1L2A8MUP6 293 aa6.81□□□□□ -1.32
PTP4A1P1-201ENST00000420539 FAM229AH3BQW9 127 aa6.81□□□□□ -1.32
PTP4A1P1-201ENST00000420539 GREM1O60565 184 aa6.81□□□□□ -1.32
PTP4A1P1-201ENST00000420539 GJB6O95452 261 aa6.81□□□□□ -1.32
PTP4A1P1-201ENST00000420539 HOXB4P17483 251 aaPredicted RBP6.81□□□□□ -1.32
PTP4A1P1-201ENST00000420539 HALP42357 657 aa6.81□□□□□ -1.32
PTP4A1P1-201ENST00000420539 LIG3P49916 1009 aa6.81□□□□□ -1.32
PTP4A1P1-201ENST00000420539 TERF1P54274 439 aa6.81□□□□□ -1.32
PTP4A1P1-201ENST00000420539 EIF6P56537 245 aaKnown RBP6.81□□□□□ -1.32
PTP4A1P1-201ENST00000420539 NLRP12P59046 1061 aa6.81□□□□□ -1.32
PTP4A1P1-201ENST00000420539 PIP4K2BP78356 416 aa6.81□□□□□ -1.32
PTP4A1P1-201ENST00000420539 C19orf57Q0VDD7 668 aa6.81□□□□□ -1.32
PTP4A1P1-201ENST00000420539 PICALMQ13492 652 aa6.81□□□□□ -1.32
PTP4A1P1-201ENST00000420539 COL9A3Q14050 684 aaPredicted RBP6.81□□□□□ -1.32
PTP4A1P1-201ENST00000420539 FXNQ16595 210 aa6.81□□□□□ -1.32
PTP4A1P1-201ENST00000420539 LONRF1Q17RB8 773 aa6.81□□□□□ -1.32
PTP4A1P1-201ENST00000420539 LARP1BQ659C4 914 aaKnown RBP6.81□□□□□ -1.32
PTP4A1P1-201ENST00000420539 PASD1Q8IV76 773 aa6.81□□□□□ -1.32
PTP4A1P1-201ENST00000420539 SUGP1Q8IWZ8 645 aaKnown RBP6.81□□□□□ -1.32
PTP4A1P1-201ENST00000420539 TTC30BQ8N4P2 665 aa6.81□□□□□ -1.32
PTP4A1P1-201ENST00000420539 ZSCAN1Q8NBB4 408 aa6.81□□□□□ -1.32
PTP4A1P1-201ENST00000420539 RIN3Q8TB24 985 aa6.81□□□□□ -1.32
PTP4A1P1-201ENST00000420539 STK35Q8TDR2 534 aa6.81□□□□□ -1.32
PTP4A1P1-201ENST00000420539 ERP27Q96DN0 273 aa6.81□□□□□ -1.32
PTP4A1P1-201ENST00000420539 KLHDC7BQ96G42 594 aa6.81□□□□□ -1.32
PTP4A1P1-201ENST00000420539 CAMKK2Q96RR4 588 aa6.81□□□□□ -1.32
PTP4A1P1-201ENST00000420539 SELENOOQ9BVL4 669 aa6.81□□□□□ -1.32
PTP4A1P1-201ENST00000420539 USP26Q9BXU7 913 aa6.81□□□□□ -1.32
PTP4A1P1-201ENST00000420539 PRDM6Q9NQX0 595 aa6.81□□□□□ -1.32
PTP4A1P1-201ENST00000420539 OBP2AQ9NY56 170 aa6.81□□□□□ -1.32
PTP4A1P1-201ENST00000420539 POLG2Q9UHN1 485 aa6.81□□□□□ -1.32
PTP4A1P1-201ENST00000420539 ZNF180Q9UJW8 692 aa6.81□□□□□ -1.32
PTP4A1P1-201ENST00000420539 SUPT16HQ9Y5B9 1047 aaKnown RBP6.81□□□□□ -1.32
PTP4A1P1-201ENST00000420539 RASSF10A6NK89 507 aa6.8□□□□□ -1.32
PTP4A1P1-201ENST00000420539 VSTM5A8MXK1 200 aa6.8□□□□□ -1.32
PTP4A1P1-201ENST00000420539 PIP5K1CO60331 668 aa6.8□□□□□ -1.32
PTP4A1P1-201ENST00000420539 HIP1RO75146 1068 aa6.8□□□□□ -1.32
PTP4A1P1-201ENST00000420539 EYA4O95677 639 aa6.8□□□□□ -1.32
PTP4A1P1-201ENST00000420539 LMNB1P20700 586 aa6.8□□□□□ -1.32
PTP4A1P1-201ENST00000420539 GARTP22102 1010 aa6.8□□□□□ -1.32
PTP4A1P1-201ENST00000420539 RRM1P23921 792 aa6.8□□□□□ -1.32
PTP4A1P1-201ENST00000420539 SERPINB3P29508 390 aa6.8□□□□□ -1.32
PTP4A1P1-201ENST00000420539 GIPRP48546 466 aa6.8□□□□□ -1.32
PTP4A1P1-201ENST00000420539 SARSP49591 514 aaKnown RBP6.8□□□□□ -1.32
PTP4A1P1-201ENST00000420539 FAM160A1Q05DH4 1040 aa6.8□□□□□ -1.32
PTP4A1P1-201ENST00000420539 PABPC4Q13310 644 aaKnown RBP eCLIP6.8□□□□□ -1.32
PTP4A1P1-201ENST00000420539 SETDB1Q15047 1291 aa6.8□□□□□ -1.32
PTP4A1P1-201ENST00000420539 TMEM67Q5HYA8 995 aa6.8□□□□□ -1.32
PTP4A1P1-201ENST00000420539 RASIP1Q5U651 963 aa6.8□□□□□ -1.32
PTP4A1P1-201ENST00000420539 STRA8Q7Z7C7 330 aa6.8□□□□□ -1.32
PTP4A1P1-201ENST00000420539 PJA1Q8NG27 643 aa6.8□□□□□ -1.32
PTP4A1P1-201ENST00000420539 DDX54Q8TDD1 881 aaKnown RBP6.8□□□□□ -1.32
PTP4A1P1-201ENST00000420539 NKD1Q969G9 470 aa6.8□□□□□ -1.32
PTP4A1P1-201ENST00000420539 CHMP4CQ96CF2 233 aa6.8□□□□□ -1.32
PTP4A1P1-201ENST00000420539 TIFAQ96CG3 184 aa6.8□□□□□ -1.32
PTP4A1P1-201ENST00000420539 MTMR8Q96EF0 704 aa6.8□□□□□ -1.32
PTP4A1P1-201ENST00000420539 TRIM11Q96F44 468 aa6.8□□□□□ -1.32
PTP4A1P1-201ENST00000420539 RHOVQ96L33 236 aa6.8□□□□□ -1.32
PTP4A1P1-201ENST00000420539 STRBPQ96SI9 672 aaKnown RBP6.8□□□□□ -1.32
PTP4A1P1-201ENST00000420539 HERPUD2Q9BSE4 406 aa6.8□□□□□ -1.32
PTP4A1P1-201ENST00000420539 YIPF4Q9BSR8 244 aa6.8□□□□□ -1.32
PTP4A1P1-201ENST00000420539 SARGQ9BW04 601 aa6.8□□□□□ -1.32
PTP4A1P1-201ENST00000420539 CCDC8Q9H0W5 538 aaPredicted RBP6.8□□□□□ -1.32
PTP4A1P1-201ENST00000420539 ATG3Q9NT62 314 aa6.8□□□□□ -1.32
PTP4A1P1-201ENST00000420539 CLIC5Q9NZA1 410 aa6.8□□□□□ -1.32
PTP4A1P1-201ENST00000420539 ASAP1Q9ULH1 1129 aa6.8□□□□□ -1.32
PTP4A1P1-201ENST00000420539 MAPRE3Q9UPY8 281 aa6.8□□□□□ -1.32
PTP4A1P1-201ENST00000420539 KLRG2A4D1S0 409 aaPredicted RBP6.79□□□□□ -1.32
PTP4A1P1-201ENST00000420539 PRSS47A8MTI9 375 aa6.79□□□□□ -1.32
PTP4A1P1-201ENST00000420539 DDX3YO15523 660 aaKnown RBP6.79□□□□□ -1.32
PTP4A1P1-201ENST00000420539 RFPL1O75677 317 aa6.79□□□□□ -1.32
PTP4A1P1-201ENST00000420539 ARHGEF15O94989 841 aa6.79□□□□□ -1.32
PTP4A1P1-201ENST00000420539 NME2P22392 152 aa6.79□□□□□ -1.32
PTP4A1P1-201ENST00000420539 CRKP46108 304 aa6.79□□□□□ -1.32
PTP4A1P1-201ENST00000420539 ITKQ08881 620 aa6.79□□□□□ -1.32
PTP4A1P1-201ENST00000420539 CBX2Q14781 532 aaPredicted RBP6.79□□□□□ -1.32
PTP4A1P1-201ENST00000420539 CCDC96Q2M329 555 aa6.79□□□□□ -1.32
PTP4A1P1-201ENST00000420539 NECAB2Q7Z6G3 386 aa6.79□□□□□ -1.32
PTP4A1P1-201ENST00000420539 ZBTB46Q86UZ6 589 aa6.79□□□□□ -1.32
PTP4A1P1-201ENST00000420539 GALNT11Q8NCW6 608 aa6.79□□□□□ -1.32
PTP4A1P1-201ENST00000420539 PHC3Q8NDX5 983 aa6.79□□□□□ -1.32
PTP4A1P1-201ENST00000420539 PPHLN1Q8NEY8 458 aaKnown RBP6.79□□□□□ -1.32
PTP4A1P1-201ENST00000420539 VPS37AQ8NEZ2 397 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms