RNA–Protein interactions for RNA: ENST00000420121.5

SSBP3-206, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-206ENST00000420121 APPBP2Q92624 585 aa13.28□□□□□ -0.28
SSBP3-206ENST00000420121 CRISPLD2Q9H0B8 497 aa13.28□□□□□ -0.28
SSBP3-206ENST00000420121 ZNFX1Q9P2E3 1918 aaKnown RBP13.28□□□□□ -0.28
SSBP3-206ENST00000420121 ROBO3Q96MS0 1386 aa13.28□□□□□ -0.28
SSBP3-206ENST00000420121 M0R2C6 588 aa13.27□□□□□ -0.29
SSBP3-206ENST00000420121 RNF113AO15541 343 aaKnown RBP13.27□□□□□ -0.29
SSBP3-206ENST00000420121 HMGCRP04035 888 aa13.27□□□□□ -0.29
SSBP3-206ENST00000420121 MAPK4P31152 587 aa13.27□□□□□ -0.29
SSBP3-206ENST00000420121 SBK1Q52WX2 424 aa13.27□□□□□ -0.29
SSBP3-206ENST00000420121 MAP3K21Q5TCX8 1036 aa13.27□□□□□ -0.29
SSBP3-206ENST00000420121 GPATCH3Q96I76 525 aa13.27□□□□□ -0.29
SSBP3-206ENST00000420121 CCDC17Q96LX7 622 aa13.27□□□□□ -0.29
SSBP3-206ENST00000420121 DEFB118Q96PH6 123 aa13.27□□□□□ -0.29
SSBP3-206ENST00000420121 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.27□□□□□ -0.29
SSBP3-206ENST00000420121 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.27□□□□□ -0.29
SSBP3-206ENST00000420121 TMX2Q9Y320 296 aa13.27□□□□□ -0.29
SSBP3-206ENST00000420121 GPAA1O43292 621 aa13.26□□□□□ -0.29
SSBP3-206ENST00000420121 XRCC5P13010 732 aaKnown RBP13.26□□□□□ -0.29
SSBP3-206ENST00000420121 CYP2B6P20813 491 aa13.26□□□□□ -0.29
SSBP3-206ENST00000420121 GIMAP6Q6P9H5 292 aa13.26□□□□□ -0.29
SSBP3-206ENST00000420121 SOCS4Q8WXH5 440 aa13.26□□□□□ -0.29
SSBP3-206ENST00000420121 YTHDC1Q96MU7 727 aaKnown RBP13.26□□□□□ -0.29
SSBP3-206ENST00000420121 SEC62Q99442 399 aaKnown RBP13.26□□□□□ -0.29
SSBP3-206ENST00000420121 NUDT12Q9BQG2 462 aa13.26□□□□□ -0.29
SSBP3-206ENST00000420121 ARPP21Q9UBL0 812 aaPredicted RBP13.26□□□□□ -0.29
SSBP3-206ENST00000420121 GLRX3O76003 335 aaKnown RBP13.25□□□□□ -0.29
SSBP3-206ENST00000420121 ZFYP08048 801 aaPredicted RBP13.25□□□□□ -0.29
SSBP3-206ENST00000420121 MX1P20591 662 aa13.25□□□□□ -0.29
SSBP3-206ENST00000420121 RASA1P20936 1047 aa13.25□□□□□ -0.29
SSBP3-206ENST00000420121 MNX1P50219 401 aaPredicted RBP13.25□□□□□ -0.29
SSBP3-206ENST00000420121 ICA1Q05084 483 aa13.25□□□□□ -0.29
SSBP3-206ENST00000420121 HDAC1Q13547 482 aaPredicted RBP13.25□□□□□ -0.29
SSBP3-206ENST00000420121 CCL14Q16627 93 aa13.25□□□□□ -0.29
SSBP3-206ENST00000420121 PLEKHH3Q7Z736 793 aa13.25□□□□□ -0.29
SSBP3-206ENST00000420121 VCPKMTQ9H867 229 aa13.25□□□□□ -0.29
SSBP3-206ENST00000420121 RPTORQ8N122 1335 aa13.24□□□□□ -0.29
SSBP3-206ENST00000420121 RANBP2P49792 3224 aaKnown RBP13.24□□□□□ -0.29
SSBP3-206ENST00000420121 FOXP2O15409 715 aa13.24□□□□□ -0.29
SSBP3-206ENST00000420121 FARP2O94887 1054 aaPredicted RBP13.24□□□□□ -0.29
SSBP3-206ENST00000420121 IGHA2P01877 340 aa13.24□□□□□ -0.29
SSBP3-206ENST00000420121 EEF2P13639 858 aaKnown RBP13.24□□□□□ -0.29
SSBP3-206ENST00000420121 COG2Q14746 738 aa13.24□□□□□ -0.29
SSBP3-206ENST00000420121 ZMYM1Q5SVZ6 1142 aa13.24□□□□□ -0.29
SSBP3-206ENST00000420121 LPAR1Q92633 364 aa13.24□□□□□ -0.29
SSBP3-206ENST00000420121 ARHGEF10LQ9HCE6 1279 aa13.24□□□□□ -0.29
SSBP3-206ENST00000420121 PLXNA1Q9UIW2 1896 aa13.24□□□□□ -0.29
SSBP3-206ENST00000420121 IGKV6D-41A0A0C4DH26 115 aa13.23□□□□□ -0.29
SSBP3-206ENST00000420121 ERC2O15083 957 aa13.23□□□□□ -0.29
SSBP3-206ENST00000420121 PTPREP23469 700 aa13.23□□□□□ -0.29
SSBP3-206ENST00000420121 RGS2P41220 211 aa13.23□□□□□ -0.29
SSBP3-206ENST00000420121 CACNB2Q08289 660 aaPredicted RBP13.23□□□□□ -0.29
SSBP3-206ENST00000420121 MAP2K5Q13163 448 aa13.23□□□□□ -0.29
SSBP3-206ENST00000420121 GRB14Q14449 540 aa13.23□□□□□ -0.29
SSBP3-206ENST00000420121 AMOTL1Q8IY63 956 aa13.23□□□□□ -0.29
SSBP3-206ENST00000420121 SPICE1Q8N0Z3 855 aa13.23□□□□□ -0.29
SSBP3-206ENST00000420121 DIS3LQ8TF46 1054 aaKnown RBP13.23□□□□□ -0.29
SSBP3-206ENST00000420121 DDRGK1Q96HY6 314 aa13.23□□□□□ -0.29
SSBP3-206ENST00000420121 APBA2Q99767 749 aa13.23□□□□□ -0.29
SSBP3-206ENST00000420121 MOV10L1Q9BXT6 1211 aaKnown RBP13.23□□□□□ -0.29
SSBP3-206ENST00000420121 KANSL2Q9H9L4 492 aa13.23□□□□□ -0.29
SSBP3-206ENST00000420121 HMX1Q9NP08 348 aaPredicted RBP13.23□□□□□ -0.29
SSBP3-206ENST00000420121 FLRT1Q9NZU1 646 aa13.23□□□□□ -0.29
SSBP3-206ENST00000420121 STAP2Q9UGK3 403 aa13.23□□□□□ -0.29
SSBP3-206ENST00000420121 TRIOBPQ9H2D6 2365 aa13.23□□□□□ -0.29
SSBP3-206ENST00000420121 H0YGN5 161 aa13.22□□□□□ -0.29
SSBP3-206ENST00000420121 WDR46O15213 610 aaKnown RBP13.22□□□□□ -0.29
SSBP3-206ENST00000420121 TFRCP02786 760 aaKnown RBP13.22□□□□□ -0.29
SSBP3-206ENST00000420121 HOXC6P09630 235 aa13.22□□□□□ -0.29
SSBP3-206ENST00000420121 PRKAR2AP13861 404 aaKnown RBP13.22□□□□□ -0.29
SSBP3-206ENST00000420121 CAPN2P17655 700 aa13.22□□□□□ -0.29
SSBP3-206ENST00000420121 GNAT2P19087 354 aa13.22□□□□□ -0.29
SSBP3-206ENST00000420121 CCNA1P78396 465 aa13.22□□□□□ -0.29
SSBP3-206ENST00000420121 ANKRD45Q5TZF3 282 aa13.22□□□□□ -0.29
SSBP3-206ENST00000420121 IFNL3Q8IZI9 196 aa13.22□□□□□ -0.29
SSBP3-206ENST00000420121 STK11IPQ8N1F8 1099 aa13.22□□□□□ -0.29
SSBP3-206ENST00000420121 NPLOC4Q8TAT6 608 aa13.22□□□□□ -0.29
SSBP3-206ENST00000420121 GCC1Q96CN9 775 aa13.22□□□□□ -0.29
SSBP3-206ENST00000420121 ATG4CQ96DT6 458 aa13.22□□□□□ -0.29
SSBP3-206ENST00000420121 TANGO6Q9C0B7 1094 aa13.22□□□□□ -0.29
SSBP3-206ENST00000420121 HOXC10Q9NYD6 342 aa13.22□□□□□ -0.29
SSBP3-206ENST00000420121 ADAMTS5Q9UNA0 930 aa13.22□□□□□ -0.29
SSBP3-206ENST00000420121 SLC15A5A6NIM6 579 aa13.21□□□□□ -0.29
SSBP3-206ENST00000420121 MINDY4BA8MYZ0 360 aa13.21□□□□□ -0.29
SSBP3-206ENST00000420121 PATL2C9JE40 543 aaKnown RBP13.21□□□□□ -0.29
SSBP3-206ENST00000420121 ZKSCAN1P17029 563 aaPredicted RBP13.21□□□□□ -0.29
SSBP3-206ENST00000420121 CCND3P30281 292 aaPredicted RBP13.21□□□□□ -0.29
SSBP3-206ENST00000420121 PDE1AP54750 535 aa13.21□□□□□ -0.29
SSBP3-206ENST00000420121 HABP4Q5JVS0 413 aaKnown RBP13.21□□□□□ -0.29
SSBP3-206ENST00000420121 TRMT44Q8IYL2 757 aaKnown RBP13.21□□□□□ -0.29
SSBP3-206ENST00000420121 PAWRQ96IZ0 340 aaKnown RBP13.21□□□□□ -0.29
SSBP3-206ENST00000420121 FSD1Q9BTV5 496 aa13.21□□□□□ -0.29
SSBP3-206ENST00000420121 SPATC1LQ9H0A9 340 aa13.21□□□□□ -0.29
SSBP3-206ENST00000420121 SH2D4AQ9H788 454 aa13.21□□□□□ -0.29
SSBP3-206ENST00000420121 FBXO28Q9NVF7 368 aa13.21□□□□□ -0.29
SSBP3-206ENST00000420121 OGDHLQ9ULD0 1010 aa13.21□□□□□ -0.29
SSBP3-206ENST00000420121 FLOT1O75955 427 aa13.2□□□□□ -0.3
SSBP3-206ENST00000420121 ERCC3P19447 782 aa13.2□□□□□ -0.3
SSBP3-206ENST00000420121 LHX8Q68G74 356 aa13.2□□□□□ -0.3
SSBP3-206ENST00000420121 CCDC129Q6ZRS4 1044 aa13.2□□□□□ -0.3
SSBP3-206ENST00000420121 CCAR1Q8IX12 1150 aaKnown RBP13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms