RNA–Protein interactions for RNA: ENST00000418988.2

PSMA1-202, Transcript of proteasome subunit alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PSMA1, Length 1,266 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA1-202ENST00000418988 COL6A3P12111 3177 aa16.69■□□□□ 0.26
PSMA1-202ENST00000418988 GUCY1A2P33402 732 aa16.68■□□□□ 0.26
PSMA1-202ENST00000418988 CDK8P49336 464 aa16.68■□□□□ 0.26
PSMA1-202ENST00000418988 TRIM32Q13049 653 aa16.68■□□□□ 0.26
PSMA1-202ENST00000418988 ZMYND8Q9ULU4 1186 aaPredicted RBP16.68■□□□□ 0.26
PSMA1-202ENST00000418988 CYP2D7A0A087X1C5 515 aa16.67■□□□□ 0.26
PSMA1-202ENST00000418988 TRIM6-TRIM34B2RNG4 842 aa16.67■□□□□ 0.26
PSMA1-202ENST00000418988 HIP1O00291 1037 aa16.67■□□□□ 0.26
PSMA1-202ENST00000418988 IRX3P78415 501 aaPredicted RBP16.67■□□□□ 0.26
PSMA1-202ENST00000418988 ICA1Q05084 483 aa16.67■□□□□ 0.26
PSMA1-202ENST00000418988 SEPT2Q15019 361 aa16.67■□□□□ 0.26
PSMA1-202ENST00000418988 NECAB2Q7Z6G3 386 aa16.67■□□□□ 0.26
PSMA1-202ENST00000418988 IFNL3Q8IZI9 196 aa16.67■□□□□ 0.26
PSMA1-202ENST00000418988 DYNLL2Q96FJ2 89 aa16.67■□□□□ 0.26
PSMA1-202ENST00000418988 SEC62Q99442 399 aaKnown RBP16.67■□□□□ 0.26
PSMA1-202ENST00000418988 NAPBQ9H115 298 aa16.67■□□□□ 0.26
PSMA1-202ENST00000418988 ASCC2Q9H1I8 757 aaPredicted RBP16.67■□□□□ 0.26
PSMA1-202ENST00000418988 ARHGEF10LQ9HCE6 1279 aa16.67■□□□□ 0.26
PSMA1-202ENST00000418988 PLXNB2O15031 1838 aa16.66■□□□□ 0.26
PSMA1-202ENST00000418988 A0A1W2PPC1 479 aa16.66■□□□□ 0.26
PSMA1-202ENST00000418988 MPHOSPH10O00566 681 aaKnown RBP16.66■□□□□ 0.26
PSMA1-202ENST00000418988 MFAP1P55081 439 aaKnown RBP16.66■□□□□ 0.26
PSMA1-202ENST00000418988 LPAR1Q92633 364 aa16.66■□□□□ 0.26
PSMA1-202ENST00000418988 EMILIN3Q9NT22 766 aa16.66■□□□□ 0.26
PSMA1-202ENST00000418988 LAMA3Q16787 3333 aa16.66■□□□□ 0.26
PSMA1-202ENST00000418988 A0A0D9SFI3 127 aa16.65■□□□□ 0.26
PSMA1-202ENST00000418988 FOXP2O15409 715 aa16.65■□□□□ 0.26
PSMA1-202ENST00000418988 PEX10O60683 326 aa16.65■□□□□ 0.26
PSMA1-202ENST00000418988 APPP05067 770 aa16.65■□□□□ 0.26
PSMA1-202ENST00000418988 SLC3A2P08195 630 aaKnown RBP16.65■□□□□ 0.26
PSMA1-202ENST00000418988 AKR1B1P15121 316 aa16.65■□□□□ 0.26
PSMA1-202ENST00000418988 SYN1P17600 705 aa16.65■□□□□ 0.26
PSMA1-202ENST00000418988 VCAM1P19320 739 aa16.65■□□□□ 0.26
PSMA1-202ENST00000418988 MCMDC2Q4G0Z9 681 aa16.65■□□□□ 0.26
PSMA1-202ENST00000418988 MORF4L1Q9UBU8 362 aa16.65■□□□□ 0.26
PSMA1-202ENST00000418988 SYNPO2Q9UMS6 1093 aa16.65■□□□□ 0.26
PSMA1-202ENST00000418988 PARP14Q460N5 1801 aa16.65■□□□□ 0.26
PSMA1-202ENST00000418988 CCDC171Q6TFL3 1326 aa16.65■□□□□ 0.26
PSMA1-202ENST00000418988 HMGCRP04035 888 aa16.64■□□□□ 0.25
PSMA1-202ENST00000418988 RASA1P20936 1047 aa16.64■□□□□ 0.25
PSMA1-202ENST00000418988 HERVK_113P62684 666 aa16.64■□□□□ 0.25
PSMA1-202ENST00000418988 ALX1Q15699 326 aa16.64■□□□□ 0.25
PSMA1-202ENST00000418988 LBX2Q6XYB7 198 aa16.64■□□□□ 0.25
PSMA1-202ENST00000418988 RILPL2Q969X0 211 aa16.64■□□□□ 0.25
PSMA1-202ENST00000418988 KANSL2Q9H9L4 492 aa16.64■□□□□ 0.25
PSMA1-202ENST00000418988 GJD2Q9UKL4 321 aa16.64■□□□□ 0.25
PSMA1-202ENST00000418988 TMX2Q9Y320 296 aa16.64■□□□□ 0.25
PSMA1-202ENST00000418988 MINDY4BA8MYZ0 360 aa16.63■□□□□ 0.25
PSMA1-202ENST00000418988 USP17L15C9J2P7 530 aa16.63■□□□□ 0.25
PSMA1-202ENST00000418988 USP17L13C9JLJ4 530 aa16.63■□□□□ 0.25
PSMA1-202ENST00000418988 USP17L11C9JVI0 530 aa16.63■□□□□ 0.25
PSMA1-202ENST00000418988 USP17L18D6R9N7 530 aa16.63■□□□□ 0.25
PSMA1-202ENST00000418988 USP17L22D6RA61 530 aa16.63■□□□□ 0.25
PSMA1-202ENST00000418988 USP17L17D6RBQ6 530 aa16.63■□□□□ 0.25
PSMA1-202ENST00000418988 USP17L19D6RCP7 530 aa16.63■□□□□ 0.25
PSMA1-202ENST00000418988 USP17L20D6RJB6 530 aa16.63■□□□□ 0.25
PSMA1-202ENST00000418988 CAPN2P17655 700 aa16.63■□□□□ 0.25
PSMA1-202ENST00000418988 SDSP20132 328 aa16.63■□□□□ 0.25
PSMA1-202ENST00000418988 CYP2B6P20813 491 aa16.63■□□□□ 0.25
PSMA1-202ENST00000418988 PDE4AP27815 886 aa16.63■□□□□ 0.25
PSMA1-202ENST00000418988 PDE4BQ07343 736 aa16.63■□□□□ 0.25
PSMA1-202ENST00000418988 PPARAQ07869 468 aa16.63■□□□□ 0.25
PSMA1-202ENST00000418988 USP17L24Q0WX57 530 aa16.63■□□□□ 0.25
PSMA1-202ENST00000418988 NMIQ13287 307 aaPredicted RBP16.63■□□□□ 0.25
PSMA1-202ENST00000418988 TTC22Q5TAA0 569 aa16.63■□□□□ 0.25
PSMA1-202ENST00000418988 Q7L0L9 218 aa16.63■□□□□ 0.25
PSMA1-202ENST00000418988 ACER1Q8TDN7 264 aa16.63■□□□□ 0.25
PSMA1-202ENST00000418988 FAM227BQ96M60 508 aa16.63■□□□□ 0.25
PSMA1-202ENST00000418988 GDF15Q99988 308 aa16.63■□□□□ 0.25
PSMA1-202ENST00000418988 MKNK2Q9HBH9 465 aa16.63■□□□□ 0.25
PSMA1-202ENST00000418988 HMX1Q9NP08 348 aaPredicted RBP16.63■□□□□ 0.25
PSMA1-202ENST00000418988 DIAPH3Q9NSV4 1193 aa16.63■□□□□ 0.25
PSMA1-202ENST00000418988 ANAPC4Q9UJX5 808 aa16.63■□□□□ 0.25
PSMA1-202ENST00000418988 RPTORQ8N122 1335 aa16.63■□□□□ 0.25
PSMA1-202ENST00000418988 RAD50Q92878 1312 aa16.63■□□□□ 0.25
PSMA1-202ENST00000418988 ZNF236Q9UL36 1845 aa16.63■□□□□ 0.25
PSMA1-202ENST00000418988 A0A0C4DFX4 3053 aa16.63■□□□□ 0.25
PSMA1-202ENST00000418988 A0A1W2PRG0 241 aa16.62■□□□□ 0.25
PSMA1-202ENST00000418988 SMIM22K7EJ46 135 aa16.62■□□□□ 0.25
PSMA1-202ENST00000418988 MNX1P50219 401 aaPredicted RBP16.62■□□□□ 0.25
PSMA1-202ENST00000418988 ZYXQ15942 572 aaKnown RBP16.62■□□□□ 0.25
PSMA1-202ENST00000418988 CCDC129Q6ZRS4 1044 aa16.62■□□□□ 0.25
PSMA1-202ENST00000418988 CENPQQ7L2Z9 268 aaPredicted RBP16.62■□□□□ 0.25
PSMA1-202ENST00000418988 NBPF3Q9H094 633 aa16.62■□□□□ 0.25
PSMA1-202ENST00000418988 VCPKMTQ9H867 229 aa16.62■□□□□ 0.25
PSMA1-202ENST00000418988 RLFQ13129 1914 aa16.62■□□□□ 0.25
PSMA1-202ENST00000418988 MYH4Q9Y623 1939 aa16.61■□□□□ 0.25
PSMA1-202ENST00000418988 WDR46O15213 610 aaKnown RBP16.61■□□□□ 0.25
PSMA1-202ENST00000418988 PCP11498 1178 aaKnown RBP16.61■□□□□ 0.25
PSMA1-202ENST00000418988 NT5C2P49902 561 aa16.61■□□□□ 0.25
PSMA1-202ENST00000418988 PPP4R3BQ5MIZ7 849 aa16.61■□□□□ 0.25
PSMA1-202ENST00000418988 CATSPERGQ6ZRH7 1159 aa16.61■□□□□ 0.25
PSMA1-202ENST00000418988 ZNF589Q86UQ0 364 aaPredicted RBP16.61■□□□□ 0.25
PSMA1-202ENST00000418988 DEFB123Q8N688 67 aa16.61■□□□□ 0.25
PSMA1-202ENST00000418988 ANKLE1Q8NAG6 615 aa16.61■□□□□ 0.25
PSMA1-202ENST00000418988 TRIB2Q92519 343 aa16.61■□□□□ 0.25
PSMA1-202ENST00000418988 C11orf49Q9H6J7 331 aa16.61■□□□□ 0.25
PSMA1-202ENST00000418988 IGKV6D-41A0A0C4DH26 115 aa16.6■□□□□ 0.25
PSMA1-202ENST00000418988 HSPD1P10809 573 aaKnown RBP16.6■□□□□ 0.25
PSMA1-202ENST00000418988 GSPT1P15170 499 aaKnown RBP16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms