RNA–Protein interactions for RNA: ENST00000417702.5

NUP50-204, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-204ENST00000417702 HOXC10Q9NYD6 342 aa18.28■□□□□ 0.52
NUP50-204ENST00000417702 ROBO3Q96MS0 1386 aa18.28■□□□□ 0.52
NUP50-204ENST00000417702 EEF2P13639 858 aaKnown RBP18.27■□□□□ 0.52
NUP50-204ENST00000417702 ELNP15502 786 aa18.27■□□□□ 0.52
NUP50-204ENST00000417702 RASA1P20936 1047 aa18.27■□□□□ 0.52
NUP50-204ENST00000417702 COG2Q14746 738 aa18.27■□□□□ 0.52
NUP50-204ENST00000417702 Q3C1V9 767 aa18.27■□□□□ 0.52
NUP50-204ENST00000417702 LBX2Q6XYB7 198 aa18.27■□□□□ 0.52
NUP50-204ENST00000417702 ZNF444Q8N0Y2 327 aaPredicted RBP18.27■□□□□ 0.52
NUP50-204ENST00000417702 NUDT12Q9BQG2 462 aa18.27■□□□□ 0.52
NUP50-204ENST00000417702 RNF208Q9H0X6 261 aa18.27■□□□□ 0.52
NUP50-204ENST00000417702 VCPKMTQ9H867 229 aa18.27■□□□□ 0.52
NUP50-204ENST00000417702 HELLSQ9NRZ9 838 aa18.27■□□□□ 0.52
NUP50-204ENST00000417702 SPDYE16A6NNV3 312 aaPredicted RBP18.26■□□□□ 0.51
NUP50-204ENST00000417702 INHAP05111 366 aa18.26■□□□□ 0.51
NUP50-204ENST00000417702 CCL5P13501 91 aa18.26■□□□□ 0.51
NUP50-204ENST00000417702 CCDC129Q6ZRS4 1044 aa18.26■□□□□ 0.51
NUP50-204ENST00000417702 SPICE1Q8N0Z3 855 aa18.26■□□□□ 0.51
NUP50-204ENST00000417702 NKX2-3Q8TAU0 364 aa18.26■□□□□ 0.51
NUP50-204ENST00000417702 SOCS4Q8WXH5 440 aa18.26■□□□□ 0.51
NUP50-204ENST00000417702 RILPL2Q969X0 211 aa18.26■□□□□ 0.51
NUP50-204ENST00000417702 GOPCQ9HD26 462 aa18.26■□□□□ 0.51
NUP50-204ENST00000417702 GJD2Q9UKL4 321 aa18.26■□□□□ 0.51
NUP50-204ENST00000417702 RAD21O60216 631 aa18.25■□□□□ 0.51
NUP50-204ENST00000417702 IRX6P78412 446 aaPredicted RBP18.25■□□□□ 0.51
NUP50-204ENST00000417702 PDE4BQ07343 736 aa18.25■□□□□ 0.51
NUP50-204ENST00000417702 POTEEQ6S8J3 1075 aa18.25■□□□□ 0.51
NUP50-204ENST00000417702 PLEKHH3Q7Z736 793 aa18.25■□□□□ 0.51
NUP50-204ENST00000417702 PLEKHM2Q8IWE5 1019 aa18.25■□□□□ 0.51
NUP50-204ENST00000417702 PORCNQ9H237 461 aa18.25■□□□□ 0.51
NUP50-204ENST00000417702 OSBPL3Q9H4L5 887 aa18.25■□□□□ 0.51
NUP50-204ENST00000417702 WDR46O15213 610 aaKnown RBP18.24■□□□□ 0.51
NUP50-204ENST00000417702 PRDM1O75626 825 aa18.24■□□□□ 0.51
NUP50-204ENST00000417702 CNMDO75829 334 aa18.24■□□□□ 0.51
NUP50-204ENST00000417702 FLOT1O75955 427 aa18.24■□□□□ 0.51
NUP50-204ENST00000417702 GJB1P08034 283 aa18.24■□□□□ 0.51
NUP50-204ENST00000417702 CYP2B6P20813 491 aa18.24■□□□□ 0.51
NUP50-204ENST00000417702 PPARAQ07869 468 aa18.24■□□□□ 0.51
NUP50-204ENST00000417702 MCMDC2Q4G0Z9 681 aa18.24■□□□□ 0.51
NUP50-204ENST00000417702 KIAA1755Q5JYT7 1200 aa18.24■□□□□ 0.51
NUP50-204ENST00000417702 WDR78Q5VTH9 848 aa18.24■□□□□ 0.51
NUP50-204ENST00000417702 GPR142Q7Z601 462 aa18.24■□□□□ 0.51
NUP50-204ENST00000417702 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.24■□□□□ 0.51
NUP50-204ENST00000417702 RBBP6Q7Z6E9 1792 aaKnown RBP18.24■□□□□ 0.51
NUP50-204ENST00000417702 CENPFP49454 3210 aa18.23■□□□□ 0.51
NUP50-204ENST00000417702 HMGCRP04035 888 aa18.23■□□□□ 0.51
NUP50-204ENST00000417702 MB21D1Q8N884 522 aa18.23■□□□□ 0.51
NUP50-204ENST00000417702 FAM227BQ96M60 508 aa18.23■□□□□ 0.51
NUP50-204ENST00000417702 UNC93B1Q9H1C4 597 aa18.23■□□□□ 0.51
NUP50-204ENST00000417702 BTBD7Q9P203 1132 aa18.23■□□□□ 0.51
NUP50-204ENST00000417702 NYAP2Q9P242 653 aa18.23■□□□□ 0.51
NUP50-204ENST00000417702 A0A0D9SFI3 127 aa18.22■□□□□ 0.51
NUP50-204ENST00000417702 TSPY3P0CV98 308 aa18.22■□□□□ 0.51
NUP50-204ENST00000417702 TSPY8P0CW00 308 aa18.22■□□□□ 0.51
NUP50-204ENST00000417702 XRCC5P13010 732 aaKnown RBP18.22■□□□□ 0.51
NUP50-204ENST00000417702 DSG3P32926 999 aa18.22■□□□□ 0.51
NUP50-204ENST00000417702 RGS2P41220 211 aa18.22■□□□□ 0.51
NUP50-204ENST00000417702 GJA8P48165 433 aa18.22■□□□□ 0.51
NUP50-204ENST00000417702 SAMD1Q6SPF0 538 aaPredicted RBP18.22■□□□□ 0.51
NUP50-204ENST00000417702 IVNS1ABPQ9Y6Y0 642 aa18.22■□□□□ 0.51
NUP50-204ENST00000417702 NMIQ13287 307 aaPredicted RBP18.21■□□□□ 0.51
NUP50-204ENST00000417702 VPS53Q5VIR6 699 aa18.21■□□□□ 0.51
NUP50-204ENST00000417702 TRMT44Q8IYL2 757 aaKnown RBP18.21■□□□□ 0.51
NUP50-204ENST00000417702 CLIP2Q9UDT6 1046 aa18.21■□□□□ 0.51
NUP50-204ENST00000417702 SLC15A5A6NIM6 579 aa18.2■□□□□ 0.5
NUP50-204ENST00000417702 FOXP2O15409 715 aa18.2■□□□□ 0.5
NUP50-204ENST00000417702 SDSP20132 328 aa18.2■□□□□ 0.5
NUP50-204ENST00000417702 MFAP1P55081 439 aaKnown RBP18.2■□□□□ 0.5
NUP50-204ENST00000417702 TFAP4Q01664 338 aa18.2■□□□□ 0.5
NUP50-204ENST00000417702 ALX1Q15699 326 aa18.2■□□□□ 0.5
NUP50-204ENST00000417702 MORN1Q5T089 497 aa18.2■□□□□ 0.5
NUP50-204ENST00000417702 NEDD1Q8NHV4 660 aa18.2■□□□□ 0.5
NUP50-204ENST00000417702 U2AF1L4Q8WU68 220 aaKnown RBP18.2■□□□□ 0.5
NUP50-204ENST00000417702 ATG4CQ96DT6 458 aa18.2■□□□□ 0.5
NUP50-204ENST00000417702 SPATC1LQ9H0A9 340 aa18.2■□□□□ 0.5
NUP50-204ENST00000417702 IGKV6D-41A0A0C4DH26 115 aa18.19■□□□□ 0.5
NUP50-204ENST00000417702 SGPL1O95470 568 aa18.19■□□□□ 0.5
NUP50-204ENST00000417702 TTLL1O95922 423 aa18.19■□□□□ 0.5
NUP50-204ENST00000417702 ZKSCAN1P17029 563 aaPredicted RBP18.19■□□□□ 0.5
NUP50-204ENST00000417702 CAPN2P17655 700 aa18.19■□□□□ 0.5
NUP50-204ENST00000417702 PTPREP23469 700 aa18.19■□□□□ 0.5
NUP50-204ENST00000417702 MAP2K5Q13163 448 aa18.19■□□□□ 0.5
NUP50-204ENST00000417702 PLS1Q14651 629 aa18.19■□□□□ 0.5
NUP50-204ENST00000417702 PPP4R3BQ5MIZ7 849 aa18.19■□□□□ 0.5
NUP50-204ENST00000417702 FAM83BQ5T0W9 1011 aa18.19■□□□□ 0.5
NUP50-204ENST00000417702 TRIB2Q92519 343 aa18.19■□□□□ 0.5
NUP50-204ENST00000417702 USP6NLQ92738 828 aa18.19■□□□□ 0.5
NUP50-204ENST00000417702 CEP95Q96GE4 821 aa18.19■□□□□ 0.5
NUP50-204ENST00000417702 APBA2Q99767 749 aa18.19■□□□□ 0.5
NUP50-204ENST00000417702 MOV10L1Q9BXT6 1211 aaKnown RBP18.19■□□□□ 0.5
NUP50-204ENST00000417702 DIAPH3Q9NSV4 1193 aa18.19■□□□□ 0.5
NUP50-204ENST00000417702 MTMR4Q9NYA4 1195 aa18.19■□□□□ 0.5
NUP50-204ENST00000417702 CCDC171Q6TFL3 1326 aa18.19■□□□□ 0.5
NUP50-204ENST00000417702 F5H6K3 240 aa18.18■□□□□ 0.5
NUP50-204ENST00000417702 HIP1O00291 1037 aa18.18■□□□□ 0.5
NUP50-204ENST00000417702 HSPD1P10809 573 aaKnown RBP18.18■□□□□ 0.5
NUP50-204ENST00000417702 CTDSPL2Q05D32 466 aa18.18■□□□□ 0.5
NUP50-204ENST00000417702 KLRC3Q07444 240 aa18.18■□□□□ 0.5
NUP50-204ENST00000417702 FAM47AQ5JRC9 791 aa18.18■□□□□ 0.5
NUP50-204ENST00000417702 SHCBP1Q8NEM2 672 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms