RNA–Protein interactions for RNA: ENST00000416651.5

NIF3L1-206, Transcript of NGG1 interacting factor 3 like 1, human

TSL 2 BASIC

Gene NIF3L1, Length 967 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NIF3L1-206	ENST00000416651	FGFR2	P21802	821 aa		10.9	□□□□□ -0.66
NIF3L1-206	ENST00000416651	PICALM	Q13492	652 aa		10.9	□□□□□ -0.66
NIF3L1-206	ENST00000416651	ADGRE1	Q14246	886 aa		10.9	□□□□□ -0.66
NIF3L1-206	ENST00000416651	WDR43	Q15061	677 aa	Known RBP eCLIP	10.9	□□□□□ -0.66
NIF3L1-206	ENST00000416651	TRIM60	Q495X7	471 aa		10.9	□□□□□ -0.66
NIF3L1-206	ENST00000416651	METTL24	Q5JXM2	366 aa		10.9	□□□□□ -0.66
NIF3L1-206	ENST00000416651	MORN1	Q5T089	497 aa		10.9	□□□□□ -0.66
NIF3L1-206	ENST00000416651	LCE2A	Q5TA79	106 aa	Predicted RBP	10.9	□□□□□ -0.66
NIF3L1-206	ENST00000416651	ASB2	Q96Q27	587 aa		10.9	□□□□□ -0.66
NIF3L1-206	ENST00000416651	NUDT12	Q9BQG2	462 aa		10.9	□□□□□ -0.66
NIF3L1-206	ENST00000416651	PDLIM7	Q9NR12	457 aa		10.9	□□□□□ -0.66
NIF3L1-206	ENST00000416651	RBPJL	Q9UBG7	517 aa		10.9	□□□□□ -0.66
NIF3L1-206	ENST00000416651	MYO9B	Q13459	2157 aa		10.89	□□□□□ -0.67
NIF3L1-206	ENST00000416651	GRM8	O00222	908 aa		10.89	□□□□□ -0.67
NIF3L1-206	ENST00000416651	CFH	P08603	1231 aa		10.89	□□□□□ -0.67
NIF3L1-206	ENST00000416651	NBPF7	P0C2Y1	421 aa	Predicted RBP	10.89	□□□□□ -0.67
NIF3L1-206	ENST00000416651	GCLC	P48506	637 aa	Predicted RBP	10.89	□□□□□ -0.67
NIF3L1-206	ENST00000416651	CAVIN4	Q5BKX8	364 aa		10.89	□□□□□ -0.67
NIF3L1-206	ENST00000416651	ALYREF	Q86V81	257 aa	Known RBP	10.89	□□□□□ -0.67
NIF3L1-206	ENST00000416651	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	10.89	□□□□□ -0.67
NIF3L1-206	ENST00000416651	ANKRD44	Q8N8A2	993 aa		10.89	□□□□□ -0.67
NIF3L1-206	ENST00000416651	PROCA1	Q8NCQ7	364 aa	Predicted RBP	10.89	□□□□□ -0.67
NIF3L1-206	ENST00000416651	LRFN3	Q9BTN0	628 aa		10.89	□□□□□ -0.67
NIF3L1-206	ENST00000416651	PRDM12	Q9H4Q4	367 aa		10.89	□□□□□ -0.67
NIF3L1-206	ENST00000416651	REV3L	O60673	3130 aa		10.89	□□□□□ -0.67
NIF3L1-206	ENST00000416651	MAST3	O60307	1309 aa		10.88	□□□□□ -0.67
NIF3L1-206	ENST00000416651	MYH13	Q9UKX3	1938 aa		10.88	□□□□□ -0.67
NIF3L1-206	ENST00000416651	PDE8B	O95263	885 aa		10.88	□□□□□ -0.67
NIF3L1-206	ENST00000416651	XRCC5	P13010	732 aa	Known RBP	10.88	□□□□□ -0.67
NIF3L1-206	ENST00000416651	CYP2C19	P33261	490 aa		10.88	□□□□□ -0.67
NIF3L1-206	ENST00000416651	PLA2G2C	Q5R387	149 aa		10.88	□□□□□ -0.67
NIF3L1-206	ENST00000416651	SLC39A5	Q6ZMH5	540 aa		10.88	□□□□□ -0.67
NIF3L1-206	ENST00000416651	GPR142	Q7Z601	462 aa		10.88	□□□□□ -0.67
NIF3L1-206	ENST00000416651	NPLOC4	Q8TAT6	608 aa		10.88	□□□□□ -0.67
NIF3L1-206	ENST00000416651	FERMT2	Q96AC1	680 aa		10.88	□□□□□ -0.67
NIF3L1-206	ENST00000416651	IDI2	Q9BXS1	227 aa		10.88	□□□□□ -0.67
NIF3L1-206	ENST00000416651	SLC6A16	Q9GZN6	736 aa		10.88	□□□□□ -0.67
NIF3L1-206	ENST00000416651	ZNF576	Q9H609	170 aa		10.88	□□□□□ -0.67
NIF3L1-206	ENST00000416651	CHD9	Q3L8U1	2897 aa		10.88	□□□□□ -0.67
NIF3L1-206	ENST00000416651	ATAD5	Q96QE3	1844 aa		10.88	□□□□□ -0.67
NIF3L1-206	ENST00000416651	MYH2	Q9UKX2	1941 aa		10.88	□□□□□ -0.67
NIF3L1-206	ENST00000416651	MROH5	Q6ZUA9	1318 aa		10.87	□□□□□ -0.67
NIF3L1-206	ENST00000416651	NR1I2	O75469	434 aa		10.87	□□□□□ -0.67
NIF3L1-206	ENST00000416651	CNMD	O75829	334 aa		10.87	□□□□□ -0.67
NIF3L1-206	ENST00000416651	CNGA1	P29973	690 aa		10.87	□□□□□ -0.67
NIF3L1-206	ENST00000416651	TFF2	Q03403	129 aa		10.87	□□□□□ -0.67
NIF3L1-206	ENST00000416651	HIC1	Q14526	733 aa		10.87	□□□□□ -0.67
NIF3L1-206	ENST00000416651	ZNF280C	Q8ND82	737 aa		10.87	□□□□□ -0.67
NIF3L1-206	ENST00000416651	ZNF384	Q8TF68	577 aa		10.87	□□□□□ -0.67
NIF3L1-206	ENST00000416651	RNPC3	Q96LT9	517 aa	Known RBP	10.87	□□□□□ -0.67
NIF3L1-206	ENST00000416651	PAGR1	Q9BTK6	254 aa		10.87	□□□□□ -0.67
NIF3L1-206	ENST00000416651	BICC1	Q9H694	974 aa	Known RBP	10.87	□□□□□ -0.67
NIF3L1-206	ENST00000416651	PRKAG2	Q9UGJ0	569 aa		10.87	□□□□□ -0.67
NIF3L1-206	ENST00000416651	DDX20	Q9UHI6	824 aa	Known RBP	10.87	□□□□□ -0.67
NIF3L1-206	ENST00000416651	SUGT1	Q9Y2Z0	365 aa		10.87	□□□□□ -0.67
NIF3L1-206	ENST00000416651	SYNGAP1	Q96PV0	1343 aa		10.86	□□□□□ -0.67
NIF3L1-206	ENST00000416651	ENTPD3	O75355	529 aa		10.86	□□□□□ -0.67
NIF3L1-206	ENST00000416651	OAT	P04181	439 aa		10.86	□□□□□ -0.67
NIF3L1-206	ENST00000416651	HERVK_113	P62684	666 aa		10.86	□□□□□ -0.67
NIF3L1-206	ENST00000416651	MTMR2	Q13614	643 aa		10.86	□□□□□ -0.67
NIF3L1-206	ENST00000416651	RALBP1	Q15311	655 aa		10.86	□□□□□ -0.67
NIF3L1-206	ENST00000416651	SMYD5	Q6GMV2	418 aa		10.86	□□□□□ -0.67
NIF3L1-206	ENST00000416651	C11orf16	Q9NQ32	467 aa		10.86	□□□□□ -0.67
NIF3L1-206	ENST00000416651	THEG	Q9P2T0	379 aa		10.86	□□□□□ -0.67
NIF3L1-206	ENST00000416651	PLXNA1	Q9UIW2	1896 aa		10.86	□□□□□ -0.67
NIF3L1-206	ENST00000416651	MYBBP1A	Q9BQG0	1328 aa	Known RBP	10.85	□□□□□ -0.67
NIF3L1-206	ENST00000416651	FAM86C2P	A6NEL3	165 aa		10.85	□□□□□ -0.67
NIF3L1-206	ENST00000416651	VAMP4	O75379	141 aa		10.85	□□□□□ -0.67
NIF3L1-206	ENST00000416651	LDHB	P07195	334 aa	Known RBP	10.85	□□□□□ -0.67
NIF3L1-206	ENST00000416651	BMP1	P13497	986 aa		10.85	□□□□□ -0.67
NIF3L1-206	ENST00000416651	RGS2	P41220	211 aa		10.85	□□□□□ -0.67
NIF3L1-206	ENST00000416651	ADCYAP1R1	P41586	468 aa		10.85	□□□□□ -0.67
NIF3L1-206	ENST00000416651	KCNQ1	P51787	676 aa		10.85	□□□□□ -0.67
NIF3L1-206	ENST00000416651	ERVK-9	P63128	1117 aa		10.85	□□□□□ -0.67
NIF3L1-206	ENST00000416651	ERVK-24	P63145	666 aa		10.85	□□□□□ -0.67
NIF3L1-206	ENST00000416651	TLE2	Q04725	743 aa		10.85	□□□□□ -0.67
NIF3L1-206	ENST00000416651	FOXC1	Q12948	553 aa		10.85	□□□□□ -0.67
NIF3L1-206	ENST00000416651	SH3D19	Q5HYK7	790 aa		10.85	□□□□□ -0.67
NIF3L1-206	ENST00000416651	PRAMEF19	Q5SWL8	479 aa		10.85	□□□□□ -0.67
NIF3L1-206	ENST00000416651	PLEKHH3	Q7Z736	793 aa		10.85	□□□□□ -0.67
NIF3L1-206	ENST00000416651	GPRC5A	Q8NFJ5	357 aa		10.85	□□□□□ -0.67
NIF3L1-206	ENST00000416651	WDR66	Q8TBY9	1149 aa		10.85	□□□□□ -0.67
NIF3L1-206	ENST00000416651	ATXN2L	Q8WWM7	1075 aa	Known RBP	10.85	□□□□□ -0.67
NIF3L1-206	ENST00000416651	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	10.85	□□□□□ -0.67
NIF3L1-206	ENST00000416651	C9orf78	Q9NZ63	289 aa	Predicted RBP	10.85	□□□□□ -0.67
NIF3L1-206	ENST00000416651	MUC6	Q6W4X9	2439 aa		10.85	□□□□□ -0.67
NIF3L1-206	ENST00000416651	GAK	O14976	1311 aa		10.84	□□□□□ -0.67
NIF3L1-206	ENST00000416651	SIPA1L1	O43166	1804 aa		10.84	□□□□□ -0.67
NIF3L1-206	ENST00000416651	DNM1L	O00429	736 aa		10.84	□□□□□ -0.67
NIF3L1-206	ENST00000416651	ZEB1	P37275	1124 aa	Predicted RBP	10.84	□□□□□ -0.67
NIF3L1-206	ENST00000416651	CAP2	P40123	477 aa		10.84	□□□□□ -0.67
NIF3L1-206	ENST00000416651	BTD	P43251	543 aa		10.84	□□□□□ -0.67
NIF3L1-206	ENST00000416651	PHKA1	P46020	1223 aa		10.84	□□□□□ -0.67
NIF3L1-206	ENST00000416651	RHBDL3	P58872	404 aa		10.84	□□□□□ -0.67
NIF3L1-206	ENST00000416651	MRPS5	P82675	430 aa	Known RBP	10.84	□□□□□ -0.67
NIF3L1-206	ENST00000416651	MAP2K5	Q13163	448 aa		10.84	□□□□□ -0.67
NIF3L1-206	ENST00000416651	SNX17	Q15036	470 aa		10.84	□□□□□ -0.67
NIF3L1-206	ENST00000416651	SLC4A10	Q6U841	1118 aa		10.84	□□□□□ -0.67
NIF3L1-206	ENST00000416651	SOCS4	Q8WXH5	440 aa		10.84	□□□□□ -0.67
NIF3L1-206	ENST00000416651	LPAR1	Q92633	364 aa		10.84	□□□□□ -0.67

Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms