RNA–Protein interactions for RNA: ENST00000415107.5

ATG4B-207, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 356 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-207ENST00000415107 FBXL16Q8N461 479 aa14.04□□□□□ -0.16
ATG4B-207ENST00000415107 NKX2-3Q8TAU0 364 aa14.04□□□□□ -0.16
ATG4B-207ENST00000415107 ZSCAN10Q96SZ4 725 aaPredicted RBP14.04□□□□□ -0.16
ATG4B-207ENST00000415107 FEZ1Q99689 392 aa14.04□□□□□ -0.16
ATG4B-207ENST00000415107 GOPCQ9HD26 462 aa14.04□□□□□ -0.16
ATG4B-207ENST00000415107 TOMM22Q9NS69 142 aa14.04□□□□□ -0.16
ATG4B-207ENST00000415107 TMOD4Q9NZQ9 345 aa14.04□□□□□ -0.16
ATG4B-207ENST00000415107 BTBD19C9JJ37 291 aa14.03□□□□□ -0.16
ATG4B-207ENST00000415107 TOP1P11387 765 aaKnown RBP14.03□□□□□ -0.16
ATG4B-207ENST00000415107 VCAM1P19320 739 aa14.03□□□□□ -0.16
ATG4B-207ENST00000415107 MCM5P33992 734 aa14.03□□□□□ -0.16
ATG4B-207ENST00000415107 MKRN3Q13064 507 aaKnown RBP14.03□□□□□ -0.16
ATG4B-207ENST00000415107 GRM1Q13255 1194 aa14.03□□□□□ -0.16
ATG4B-207ENST00000415107 SEC23AQ15436 765 aa14.03□□□□□ -0.16
ATG4B-207ENST00000415107 LBX2Q6XYB7 198 aa14.03□□□□□ -0.16
ATG4B-207ENST00000415107 CLEC10AQ8IUN9 316 aa14.03□□□□□ -0.16
ATG4B-207ENST00000415107 FAM43AQ8N2R8 423 aa14.03□□□□□ -0.16
ATG4B-207ENST00000415107 NEK1Q96PY6 1258 aa14.03□□□□□ -0.16
ATG4B-207ENST00000415107 TM6SF1Q9BZW5 370 aa14.03□□□□□ -0.16
ATG4B-207ENST00000415107 PNMA3Q9UL41 463 aa14.03□□□□□ -0.16
ATG4B-207ENST00000415107 SNX14Q9Y5W7 946 aa14.03□□□□□ -0.16
ATG4B-207ENST00000415107 TNKSO95271 1327 aa14.03□□□□□ -0.16
ATG4B-207ENST00000415107 MYPNQ86TC9 1320 aa14.03□□□□□ -0.16
ATG4B-207ENST00000415107 PCNTO95613 3336 aa14.03□□□□□ -0.16
ATG4B-207ENST00000415107 PARP14Q460N5 1801 aa14.02□□□□□ -0.16
ATG4B-207ENST00000415107 A0A0G2JMZ2 1700 aa14.02□□□□□ -0.16
ATG4B-207ENST00000415107 ADGRA2Q96PE1 1338 aa14.02□□□□□ -0.17
ATG4B-207ENST00000415107 SNHG28P0DPA3 235 aa14.02□□□□□ -0.17
ATG4B-207ENST00000415107 LIFRP42702 1097 aa14.02□□□□□ -0.17
ATG4B-207ENST00000415107 ANTXR2P58335 489 aa14.02□□□□□ -0.17
ATG4B-207ENST00000415107 SART3Q15020 963 aaKnown RBP14.02□□□□□ -0.17
ATG4B-207ENST00000415107 CYB5R4Q7L1T6 521 aa14.02□□□□□ -0.17
ATG4B-207ENST00000415107 ENAHQ8N8S7 591 aaPredicted RBP14.02□□□□□ -0.17
ATG4B-207ENST00000415107 GTF3C2Q8WUA4 911 aaPredicted RBP14.02□□□□□ -0.17
ATG4B-207ENST00000415107 GMCL1Q96IK5 515 aa14.02□□□□□ -0.17
ATG4B-207ENST00000415107 TMEM87BQ96K49 555 aa14.02□□□□□ -0.17
ATG4B-207ENST00000415107 PARK7Q99497 189 aaKnown RBP14.02□□□□□ -0.17
ATG4B-207ENST00000415107 UBAC1Q9BSL1 405 aa14.02□□□□□ -0.17
ATG4B-207ENST00000415107 CLIP2Q9UDT6 1046 aa14.02□□□□□ -0.17
ATG4B-207ENST00000415107 STX8Q9UNK0 236 aa14.02□□□□□ -0.17
ATG4B-207ENST00000415107 F5H6K3 240 aa14.01□□□□□ -0.17
ATG4B-207ENST00000415107 PDHXO00330 501 aa14.01□□□□□ -0.17
ATG4B-207ENST00000415107 NMT2O60551 498 aa14.01□□□□□ -0.17
ATG4B-207ENST00000415107 PLA2G6O60733 806 aa14.01□□□□□ -0.17
ATG4B-207ENST00000415107 PSMA5P28066 241 aa14.01□□□□□ -0.17
ATG4B-207ENST00000415107 KLRC3Q07444 240 aa14.01□□□□□ -0.17
ATG4B-207ENST00000415107 ADCK5Q3MIX3 580 aa14.01□□□□□ -0.17
ATG4B-207ENST00000415107 TREML2Q5T2D2 321 aa14.01□□□□□ -0.17
ATG4B-207ENST00000415107 DHX32Q7L7V1 743 aaKnown RBP14.01□□□□□ -0.17
ATG4B-207ENST00000415107 IL27Q8NEV9 243 aa14.01□□□□□ -0.17
ATG4B-207ENST00000415107 TMEM47Q9BQJ4 181 aa14.01□□□□□ -0.17
ATG4B-207ENST00000415107 AGXT2Q9BYV1 514 aa14.01□□□□□ -0.17
ATG4B-207ENST00000415107 RNF186Q9NXI6 227 aa14.01□□□□□ -0.17
ATG4B-207ENST00000415107 RLFQ13129 1914 aa14.01□□□□□ -0.17
ATG4B-207ENST00000415107 USP17L15C9J2P7 530 aa14□□□□□ -0.17
ATG4B-207ENST00000415107 USP17L13C9JLJ4 530 aa14□□□□□ -0.17
ATG4B-207ENST00000415107 USP17L11C9JVI0 530 aa14□□□□□ -0.17
ATG4B-207ENST00000415107 USP17L18D6R9N7 530 aa14□□□□□ -0.17
ATG4B-207ENST00000415107 USP17L22D6RA61 530 aa14□□□□□ -0.17
ATG4B-207ENST00000415107 USP17L17D6RBQ6 530 aa14□□□□□ -0.17
ATG4B-207ENST00000415107 USP17L19D6RCP7 530 aa14□□□□□ -0.17
ATG4B-207ENST00000415107 USP17L20D6RJB6 530 aa14□□□□□ -0.17
ATG4B-207ENST00000415107 SEC24BO95487 1268 aa14□□□□□ -0.17
ATG4B-207ENST00000415107 NDUFB10O96000 172 aa14□□□□□ -0.17
ATG4B-207ENST00000415107 EXOSC10Q01780 885 aaKnown RBP14□□□□□ -0.17
ATG4B-207ENST00000415107 USP17L24Q0WX57 530 aa14□□□□□ -0.17
ATG4B-207ENST00000415107 KIAA1755Q5JYT7 1200 aa14□□□□□ -0.17
ATG4B-207ENST00000415107 GADL1Q6ZQY3 521 aa14□□□□□ -0.17
ATG4B-207ENST00000415107 CATSPERGQ6ZRH7 1159 aa14□□□□□ -0.17
ATG4B-207ENST00000415107 SGMS1Q86VZ5 419 aa14□□□□□ -0.17
ATG4B-207ENST00000415107 TMTC2Q8N394 836 aa14□□□□□ -0.17
ATG4B-207ENST00000415107 IGDCC4Q8TDY8 1250 aa14□□□□□ -0.17
ATG4B-207ENST00000415107 DCAF4Q8WV16 495 aa14□□□□□ -0.17
ATG4B-207ENST00000415107 BEGAINQ9BUH8 593 aa14□□□□□ -0.17
ATG4B-207ENST00000415107 ERICH2A1L162 156 aa13.99□□□□□ -0.17
ATG4B-207ENST00000415107 SH2B2O14492 632 aaPredicted RBP13.99□□□□□ -0.17
ATG4B-207ENST00000415107 TLR2O60603 784 aa13.99□□□□□ -0.17
ATG4B-207ENST00000415107 OSBPP22059 807 aa13.99□□□□□ -0.17
ATG4B-207ENST00000415107 RBM25P49756 843 aaKnown RBP13.99□□□□□ -0.17
ATG4B-207ENST00000415107 RCAN1P53805 252 aa13.99□□□□□ -0.17
ATG4B-207ENST00000415107 IFIT1BQ5T764 474 aaKnown RBP13.99□□□□□ -0.17
ATG4B-207ENST00000415107 MAP3K14Q99558 947 aa13.99□□□□□ -0.17
ATG4B-207ENST00000415107 ASCC2Q9H1I8 757 aaPredicted RBP13.99□□□□□ -0.17
ATG4B-207ENST00000415107 RPAP3Q9H6T3 665 aaPredicted RBP13.99□□□□□ -0.17
ATG4B-207ENST00000415107 ZFYVE28Q9HCC9 887 aa13.99□□□□□ -0.17
ATG4B-207ENST00000415107 ZSWIM6Q9HCJ5 1215 aa13.99□□□□□ -0.17
ATG4B-207ENST00000415107 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.99□□□□□ -0.17
ATG4B-207ENST00000415107 PRC1O43663 620 aa13.98□□□□□ -0.17
ATG4B-207ENST00000415107 PDHBP11177 359 aa13.98□□□□□ -0.17
ATG4B-207ENST00000415107 GCLCP48506 637 aaPredicted RBP13.98□□□□□ -0.17
ATG4B-207ENST00000415107 ATP2B2Q01814 1243 aa13.98□□□□□ -0.17
ATG4B-207ENST00000415107 CRHR2Q13324 411 aa13.98□□□□□ -0.17
ATG4B-207ENST00000415107 DGKZQ13574 1117 aa13.98□□□□□ -0.17
ATG4B-207ENST00000415107 WTAPQ15007 396 aa13.98□□□□□ -0.17
ATG4B-207ENST00000415107 TAF1CQ15572 869 aaPredicted RBP13.98□□□□□ -0.17
ATG4B-207ENST00000415107 SLFN13Q68D06 897 aa13.98□□□□□ -0.17
ATG4B-207ENST00000415107 LRRC47Q8N1G4 583 aaKnown RBP13.98□□□□□ -0.17
ATG4B-207ENST00000415107 PNMA1Q8ND90 353 aa13.98□□□□□ -0.17
ATG4B-207ENST00000415107 ZKSCAN3Q9BRR0 538 aa13.98□□□□□ -0.17
ATG4B-207ENST00000415107 BACH2Q9BYV9 841 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms