RNA–Protein interactions for RNA: ENST00000414620.1

ACTB-202, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 561 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-202ENST00000414620 CCNA1P78396 465 aa18.68■□□□□ 0.58
ACTB-202ENST00000414620 CTR9Q6PD62 1173 aa18.68■□□□□ 0.58
ACTB-202ENST00000414620 SAMD1Q6SPF0 538 aaPredicted RBP18.68■□□□□ 0.58
ACTB-202ENST00000414620 CHRDL2Q6WN34 429 aa18.68■□□□□ 0.58
ACTB-202ENST00000414620 C16orf86Q6ZW13 317 aa18.68■□□□□ 0.58
ACTB-202ENST00000414620 SPICE1Q8N0Z3 855 aa18.68■□□□□ 0.58
ACTB-202ENST00000414620 KBTBD3Q8NAB2 608 aa18.68■□□□□ 0.58
ACTB-202ENST00000414620 USP6NLQ92738 828 aa18.68■□□□□ 0.58
ACTB-202ENST00000414620 APBA2Q99767 749 aa18.68■□□□□ 0.58
ACTB-202ENST00000414620 ARHGEF10LQ9HCE6 1279 aa18.68■□□□□ 0.58
ACTB-202ENST00000414620 XRCC5P13010 732 aaKnown RBP18.67■□□□□ 0.58
ACTB-202ENST00000414620 RRP1P56182 461 aaKnown RBP18.67■□□□□ 0.58
ACTB-202ENST00000414620 ATP2B2Q01814 1243 aa18.67■□□□□ 0.58
ACTB-202ENST00000414620 MAP2K5Q13163 448 aa18.67■□□□□ 0.58
ACTB-202ENST00000414620 LBX2Q6XYB7 198 aa18.67■□□□□ 0.58
ACTB-202ENST00000414620 PLXNA1Q9UIW2 1896 aa18.67■□□□□ 0.58
ACTB-202ENST00000414620 CCND3P30281 292 aaPredicted RBP18.66■□□□□ 0.58
ACTB-202ENST00000414620 CACNB2Q08289 660 aaPredicted RBP18.66■□□□□ 0.58
ACTB-202ENST00000414620 MAP3K21Q5TCX8 1036 aa18.66■□□□□ 0.58
ACTB-202ENST00000414620 SIAH1Q8IUQ4 282 aa18.66■□□□□ 0.58
ACTB-202ENST00000414620 OTUD7AQ8TE49 926 aaPredicted RBP18.66■□□□□ 0.58
ACTB-202ENST00000414620 APPBP2Q92624 585 aa18.66■□□□□ 0.58
ACTB-202ENST00000414620 OSBP2Q969R2 916 aa18.66■□□□□ 0.58
ACTB-202ENST00000414620 STRBPQ96SI9 672 aaKnown RBP18.66■□□□□ 0.58
ACTB-202ENST00000414620 ARPP21Q9UBL0 812 aaPredicted RBP18.66■□□□□ 0.58
ACTB-202ENST00000414620 M0R2C6 588 aa18.65■□□□□ 0.58
ACTB-202ENST00000414620 EVI5O60447 810 aa18.65■□□□□ 0.58
ACTB-202ENST00000414620 GLRX3O76003 335 aaKnown RBP18.65■□□□□ 0.58
ACTB-202ENST00000414620 PTPREP23469 700 aa18.65■□□□□ 0.58
ACTB-202ENST00000414620 COG2Q14746 738 aa18.65■□□□□ 0.58
ACTB-202ENST00000414620 NECAB2Q7Z6G3 386 aa18.65■□□□□ 0.58
ACTB-202ENST00000414620 TRMT44Q8IYL2 757 aaKnown RBP18.65■□□□□ 0.58
ACTB-202ENST00000414620 CCDC17Q96LX7 622 aa18.65■□□□□ 0.58
ACTB-202ENST00000414620 VCPKMTQ9H867 229 aa18.65■□□□□ 0.58
ACTB-202ENST00000414620 FLRT1Q9NZU1 646 aa18.65■□□□□ 0.58
ACTB-202ENST00000414620 TMX2Q9Y320 296 aa18.65■□□□□ 0.58
ACTB-202ENST00000414620 IVNS1ABPQ9Y6Y0 642 aa18.65■□□□□ 0.58
ACTB-202ENST00000414620 MINDY4BA8MYZ0 360 aa18.64■□□□□ 0.57
ACTB-202ENST00000414620 RNF113AO15541 343 aaKnown RBP18.64■□□□□ 0.57
ACTB-202ENST00000414620 GPAA1O43292 621 aa18.64■□□□□ 0.57
ACTB-202ENST00000414620 RAD21O60216 631 aa18.64■□□□□ 0.57
ACTB-202ENST00000414620 FLOT1O75955 427 aa18.64■□□□□ 0.57
ACTB-202ENST00000414620 EEF2P13639 858 aaKnown RBP18.64■□□□□ 0.57
ACTB-202ENST00000414620 NPLOC4Q8TAT6 608 aa18.64■□□□□ 0.57
ACTB-202ENST00000414620 YTHDC1Q96MU7 727 aaKnown RBP18.64■□□□□ 0.57
ACTB-202ENST00000414620 CRBNQ96SW2 442 aa18.64■□□□□ 0.57
ACTB-202ENST00000414620 MOV10L1Q9BXT6 1211 aaKnown RBP18.64■□□□□ 0.57
ACTB-202ENST00000414620 SH2D4AQ9H788 454 aa18.64■□□□□ 0.57
ACTB-202ENST00000414620 NR2E3Q9Y5X4 410 aa18.64■□□□□ 0.57
ACTB-202ENST00000414620 CEP290O15078 2479 aa18.64■□□□□ 0.57
ACTB-202ENST00000414620 SLC15A5A6NIM6 579 aa18.63■□□□□ 0.57
ACTB-202ENST00000414620 GSG1L2A8MUP6 293 aa18.63■□□□□ 0.57
ACTB-202ENST00000414620 MNX1P50219 401 aaPredicted RBP18.63■□□□□ 0.57
ACTB-202ENST00000414620 FXR1P51114 621 aaKnown RBP eCLIP18.63■□□□□ 0.572e-13■□□□□ 11.2
ACTB-202ENST00000414620 GRB14Q14449 540 aa18.63■□□□□ 0.57
ACTB-202ENST00000414620 PLS1Q14651 629 aa18.63■□□□□ 0.57
ACTB-202ENST00000414620 ANKLE1Q8NAG6 615 aa18.63■□□□□ 0.57
ACTB-202ENST00000414620 LPAR1Q92633 364 aa18.63■□□□□ 0.57
ACTB-202ENST00000414620 ATG4CQ96DT6 458 aa18.63■□□□□ 0.57
ACTB-202ENST00000414620 EPB41L4AQ9HCS5 686 aaPredicted RBP18.63■□□□□ 0.57
ACTB-202ENST00000414620 WDR46O15213 610 aaKnown RBP18.62■□□□□ 0.57
ACTB-202ENST00000414620 CAPN2P17655 700 aa18.62■□□□□ 0.57
ACTB-202ENST00000414620 DSG3P32926 999 aa18.62■□□□□ 0.57
ACTB-202ENST00000414620 TDO2P48775 406 aa18.62■□□□□ 0.57
ACTB-202ENST00000414620 C7orf61Q8IZ16 206 aa18.62■□□□□ 0.57
ACTB-202ENST00000414620 PI4K2BQ8TCG2 481 aa18.62■□□□□ 0.57
ACTB-202ENST00000414620 SPATC1LQ9H0A9 340 aa18.62■□□□□ 0.57
ACTB-202ENST00000414620 C11orf49Q9H6J7 331 aa18.62■□□□□ 0.57
ACTB-202ENST00000414620 HOXC10Q9NYD6 342 aa18.62■□□□□ 0.57
ACTB-202ENST00000414620 RBM27Q9P2N5 1060 aaKnown RBP18.62■□□□□ 0.57
ACTB-202ENST00000414620 OGDHLQ9ULD0 1010 aa18.62■□□□□ 0.57
ACTB-202ENST00000414620 TTC41PQ6P2S7 1318 aa18.62■□□□□ 0.57
ACTB-202ENST00000414620 ERC2O15083 957 aa18.61■□□□□ 0.57
ACTB-202ENST00000414620 ZFYP08048 801 aaPredicted RBP18.61■□□□□ 0.57
ACTB-202ENST00000414620 ERCC3P19447 782 aa18.61■□□□□ 0.57
ACTB-202ENST00000414620 RASA1P20936 1047 aa18.61■□□□□ 0.57
ACTB-202ENST00000414620 SBK1Q52WX2 424 aa18.61■□□□□ 0.57
ACTB-202ENST00000414620 SEC62Q99442 399 aaKnown RBP18.61■□□□□ 0.57
ACTB-202ENST00000414620 FSD1Q9BTV5 496 aa18.61■□□□□ 0.57
ACTB-202ENST00000414620 NBPF3Q9H094 633 aa18.61■□□□□ 0.57
ACTB-202ENST00000414620 KANSL2Q9H9L4 492 aa18.61■□□□□ 0.57
ACTB-202ENST00000414620 FBXO28Q9NVF7 368 aa18.61■□□□□ 0.57
ACTB-202ENST00000414620 ROBO3Q96MS0 1386 aa18.6■□□□□ 0.57
ACTB-202ENST00000414620 APPP05067 770 aa18.6■□□□□ 0.57
ACTB-202ENST00000414620 MFSD14CQ5VZR4 134 aa18.6■□□□□ 0.57
ACTB-202ENST00000414620 NCAPG2Q86XI2 1143 aa18.6■□□□□ 0.57
ACTB-202ENST00000414620 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.6■□□□□ 0.57
ACTB-202ENST00000414620 MKNK2Q9HBH9 465 aa18.6■□□□□ 0.57
ACTB-202ENST00000414620 PFASO15067 1338 aa18.59■□□□□ 0.57
ACTB-202ENST00000414620 MX1P20591 662 aa18.59■□□□□ 0.57
ACTB-202ENST00000414620 ADORA2AP29274 412 aa18.59■□□□□ 0.57
ACTB-202ENST00000414620 CNGA1P29973 690 aa18.59■□□□□ 0.57
ACTB-202ENST00000414620 CYP2C19P33261 490 aa18.59■□□□□ 0.57
ACTB-202ENST00000414620 FAM83BQ5T0W9 1011 aa18.59■□□□□ 0.57
ACTB-202ENST00000414620 DPP9Q86TI2 863 aa18.59■□□□□ 0.57
ACTB-202ENST00000414620 GOPCQ9HD26 462 aa18.59■□□□□ 0.57
ACTB-202ENST00000414620 ZMYND8Q9ULU4 1186 aaPredicted RBP18.59■□□□□ 0.57
ACTB-202ENST00000414620 TRIOBPQ9H2D6 2365 aa18.58■□□□□ 0.56
ACTB-202ENST00000414620 PRDM1O75626 825 aa18.58■□□□□ 0.56
ACTB-202ENST00000414620 HOXC6P09630 235 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 139.6 ms