RNA–Protein interactions for RNA: ENST00000414411.3

DDB1-202, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,904 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-202ENST00000414411 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.62□□□□□ -0.55
DDB1-202ENST00000414411 UNCXA6NJT0 531 aa11.62□□□□□ -0.55
DDB1-202ENST00000414411 CELF2O95319 508 aaKnown RBP11.62□□□□□ -0.55
DDB1-202ENST00000414411 MBD3O95983 291 aa11.62□□□□□ -0.55
DDB1-202ENST00000414411 ASNSP08243 561 aa11.62□□□□□ -0.55
DDB1-202ENST00000414411 IREB2P48200 963 aaKnown RBP11.62□□□□□ -0.55
DDB1-202ENST00000414411 FSTL1Q12841 308 aa11.62□□□□□ -0.55
DDB1-202ENST00000414411 SEPT2Q15019 361 aa11.62□□□□□ -0.55
DDB1-202ENST00000414411 IQCA1Q86XH1 822 aa11.62□□□□□ -0.55
DDB1-202ENST00000414411 DGKHQ86XP1 1220 aa11.62□□□□□ -0.55
DDB1-202ENST00000414411 REM2Q8IYK8 340 aaPredicted RBP11.62□□□□□ -0.55
DDB1-202ENST00000414411 SCYL3Q8IZE3 742 aa11.62□□□□□ -0.55
DDB1-202ENST00000414411 ENAHQ8N8S7 591 aaPredicted RBP11.62□□□□□ -0.55
DDB1-202ENST00000414411 CEP95Q96GE4 821 aa11.62□□□□□ -0.55
DDB1-202ENST00000414411 TMEM87BQ96K49 555 aa11.62□□□□□ -0.55
DDB1-202ENST00000414411 ZKSCAN3Q9BRR0 538 aa11.62□□□□□ -0.55
DDB1-202ENST00000414411 KANSL2Q9H9L4 492 aa11.62□□□□□ -0.55
DDB1-202ENST00000414411 GBA2Q9HCG7 927 aaPredicted RBP11.62□□□□□ -0.55
DDB1-202ENST00000414411 CABP5Q9NP86 173 aa11.62□□□□□ -0.55
DDB1-202ENST00000414411 GPHNQ9NQX3 736 aaPredicted RBP11.62□□□□□ -0.55
DDB1-202ENST00000414411 CREBZFQ9NS37 354 aa11.62□□□□□ -0.55
DDB1-202ENST00000414411 PDRG1Q9NUG6 133 aa11.62□□□□□ -0.55
DDB1-202ENST00000414411 MTMR4Q9NYA4 1195 aa11.62□□□□□ -0.55
DDB1-202ENST00000414411 ZBTB21Q9ULJ3 1066 aa11.62□□□□□ -0.55
DDB1-202ENST00000414411 ATAD5Q96QE3 1844 aa11.61□□□□□ -0.55
DDB1-202ENST00000414411 LARGE1O95461 756 aa11.61□□□□□ -0.55
DDB1-202ENST00000414411 CCDC178Q5BJE1 867 aa11.61□□□□□ -0.55
DDB1-202ENST00000414411 ARMC9Q7Z3E5 817 aa11.61□□□□□ -0.55
DDB1-202ENST00000414411 LRRC2Q9BYS8 371 aa11.61□□□□□ -0.55
DDB1-202ENST00000414411 ZNF408Q9H9D4 720 aa11.61□□□□□ -0.55
DDB1-202ENST00000414411 OTOFQ9HC10 1997 aa11.61□□□□□ -0.55
DDB1-202ENST00000414411 TNKSO95271 1327 aa11.61□□□□□ -0.55
DDB1-202ENST00000414411 UBE2Q2LH0YL09 131 aa11.6□□□□□ -0.55
DDB1-202ENST00000414411 MPHOSPH10O00566 681 aaKnown RBP11.6□□□□□ -0.55
DDB1-202ENST00000414411 SH2B2O14492 632 aaPredicted RBP11.6□□□□□ -0.55
DDB1-202ENST00000414411 IFIT3O14879 490 aaKnown RBP11.6□□□□□ -0.55
DDB1-202ENST00000414411 LIFRP42702 1097 aa11.6□□□□□ -0.55
DDB1-202ENST00000414411 EVCP57679 992 aa11.6□□□□□ -0.55
DDB1-202ENST00000414411 TOB2Q14106 344 aaPredicted RBP11.6□□□□□ -0.55
DDB1-202ENST00000414411 VGLL4Q14135 290 aa11.6□□□□□ -0.55
DDB1-202ENST00000414411 Q6ZUG5 572 aa11.6□□□□□ -0.55
DDB1-202ENST00000414411 ANKRD13AQ8IZ07 590 aa11.6□□□□□ -0.55
DDB1-202ENST00000414411 MKL1Q969V6 931 aa11.6□□□□□ -0.55
DDB1-202ENST00000414411 ZSCAN31Q96LW9 406 aaPredicted RBP11.6□□□□□ -0.55
DDB1-202ENST00000414411 LARP6Q9BRS8 491 aaKnown RBP11.6□□□□□ -0.55
DDB1-202ENST00000414411 UBAC1Q9BSL1 405 aa11.6□□□□□ -0.55
DDB1-202ENST00000414411 LY9Q9HBG7 655 aa11.6□□□□□ -0.55
DDB1-202ENST00000414411 SENP2Q9HC62 589 aa11.6□□□□□ -0.55
DDB1-202ENST00000414411 SH2B1Q9NRF2 756 aaPredicted RBP11.6□□□□□ -0.55
DDB1-202ENST00000414411 NYAP2Q9P242 653 aa11.6□□□□□ -0.55
DDB1-202ENST00000414411 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.6□□□□□ -0.55
DDB1-202ENST00000414411 SNCAIPQ9Y6H5 919 aa11.6□□□□□ -0.55
DDB1-202ENST00000414411 TCHHQ07283 1943 aa11.6□□□□□ -0.55
DDB1-202ENST00000414411 DOCK1Q14185 1865 aa11.6□□□□□ -0.55
DDB1-202ENST00000414411 PTPRAP18433 802 aa11.6□□□□□ -0.55
DDB1-202ENST00000414411 NASPP49321 788 aaPredicted RBP11.6□□□□□ -0.55
DDB1-202ENST00000414411 TTLL12Q14166 644 aaPredicted RBP11.6□□□□□ -0.55
DDB1-202ENST00000414411 SART3Q15020 963 aaKnown RBP11.6□□□□□ -0.55
DDB1-202ENST00000414411 TMEM67Q5HYA8 995 aa11.6□□□□□ -0.55
DDB1-202ENST00000414411 SGMS1Q86VZ5 419 aa11.6□□□□□ -0.55
DDB1-202ENST00000414411 CLEC10AQ8IUN9 316 aa11.6□□□□□ -0.55
DDB1-202ENST00000414411 C2orf69Q8N8R5 385 aa11.6□□□□□ -0.55
DDB1-202ENST00000414411 CLMNQ96JQ2 1002 aa11.6□□□□□ -0.55
DDB1-202ENST00000414411 TMEM63CQ9P1W3 806 aa11.6□□□□□ -0.55
DDB1-202ENST00000414411 RBM27Q9P2N5 1060 aaKnown RBP11.6□□□□□ -0.55
DDB1-202ENST00000414411 SMC3Q9UQE7 1217 aa11.6□□□□□ -0.55
DDB1-202ENST00000414411 PHIPQ8WWQ0 1821 aa11.59□□□□□ -0.55
DDB1-202ENST00000414411 A0A1W2PRG0 241 aa11.59□□□□□ -0.55
DDB1-202ENST00000414411 TTLL1O95922 423 aa11.59□□□□□ -0.55
DDB1-202ENST00000414411 EEF2P13639 858 aaKnown RBP11.59□□□□□ -0.55
DDB1-202ENST00000414411 MNX1P50219 401 aaPredicted RBP11.59□□□□□ -0.55
DDB1-202ENST00000414411 TMTC2Q8N394 836 aa11.59□□□□□ -0.55
DDB1-202ENST00000414411 RRAGDQ9NQL2 400 aaPredicted RBP11.59□□□□□ -0.55
DDB1-202ENST00000414411 MYH4Q9Y623 1939 aa11.59□□□□□ -0.55
DDB1-202ENST00000414411 USP17L5A8MUK1 530 aa11.58□□□□□ -0.55
DDB1-202ENST00000414411 STX6O43752 255 aa11.58□□□□□ -0.55
DDB1-202ENST00000414411 ZSCAN22P10073 491 aaPredicted RBP11.58□□□□□ -0.55
DDB1-202ENST00000414411 SYT1P21579 422 aa11.58□□□□□ -0.55
DDB1-202ENST00000414411 ICA1Q05084 483 aa11.58□□□□□ -0.55
DDB1-202ENST00000414411 WTAPQ15007 396 aa11.58□□□□□ -0.55
DDB1-202ENST00000414411 PPP4R3BQ5MIZ7 849 aa11.58□□□□□ -0.55
DDB1-202ENST00000414411 CCDC84Q86UT8 332 aaPredicted RBP11.58□□□□□ -0.55
DDB1-202ENST00000414411 CCDC83Q8IWF9 413 aa11.58□□□□□ -0.55
DDB1-202ENST00000414411 TMEM87AQ8NBN3 555 aa11.58□□□□□ -0.55
DDB1-202ENST00000414411 BRF1Q92994 677 aa11.58□□□□□ -0.55
DDB1-202ENST00000414411 TMEM47Q9BQJ4 181 aa11.58□□□□□ -0.55
DDB1-202ENST00000414411 WDR18Q9BV38 432 aa11.58□□□□□ -0.55
DDB1-202ENST00000414411 CLIP2Q9UDT6 1046 aa11.58□□□□□ -0.55
DDB1-202ENST00000414411 STX8Q9UNK0 236 aa11.58□□□□□ -0.55
DDB1-202ENST00000414411 CSADQ9Y600 493 aa11.58□□□□□ -0.55
DDB1-202ENST00000414411 ERICH2A1L162 156 aa11.58□□□□□ -0.56
DDB1-202ENST00000414411 PRR29P0C7W0 189 aa11.58□□□□□ -0.56
DDB1-202ENST00000414411 ST3GAL1Q11201 340 aa11.58□□□□□ -0.56
DDB1-202ENST00000414411 ME3Q16798 604 aa11.58□□□□□ -0.56
DDB1-202ENST00000414411 IFIT1BQ5T764 474 aaKnown RBP11.58□□□□□ -0.56
DDB1-202ENST00000414411 SAPCD2Q86UD0 394 aa11.58□□□□□ -0.56
DDB1-202ENST00000414411 ACER1Q8TDN7 264 aa11.58□□□□□ -0.56
DDB1-202ENST00000414411 PICK1Q9NRD5 415 aa11.58□□□□□ -0.56
DDB1-202ENST00000414411 SYNPO2Q9UMS6 1093 aa11.58□□□□□ -0.56
DDB1-202ENST00000414411 ZHX2Q9Y6X8 837 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms