RNA–Protein interactions for RNA: ENST00000413574.6

CSNK1E-206, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5 BASIC

Gene CSNK1E, Length 1,631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-206ENST00000413574 TMEM47Q9BQJ4 181 aa35.99■■■■□ 3.35
CSNK1E-206ENST00000413574 SH2D4AQ9H788 454 aa35.99■■■■□ 3.35
CSNK1E-206ENST00000413574 TMOD4Q9NZQ9 345 aa35.99■■■■□ 3.35
CSNK1E-206ENST00000413574 BTBD19C9JJ37 291 aa35.98■■■■□ 3.35
CSNK1E-206ENST00000413574 FASTKD5Q7L8L6 764 aaKnown RBP35.98■■■■□ 3.35
CSNK1E-206ENST00000413574 CHMP4CQ96CF2 233 aa35.98■■■■□ 3.35
CSNK1E-206ENST00000413574 TCEANC2Q96MN5 208 aa35.98■■■■□ 3.35
CSNK1E-206ENST00000413574 LRRC2Q9BYS8 371 aa35.98■■■■□ 3.35
CSNK1E-206ENST00000413574 USP14P54578 494 aa35.97■■■■□ 3.35
CSNK1E-206ENST00000413574 INHBEP58166 350 aa35.97■■■■□ 3.35
CSNK1E-206ENST00000413574 FAM43AQ8N2R8 423 aa35.97■■■■□ 3.35
CSNK1E-206ENST00000413574 VCPKMTQ9H867 229 aa35.97■■■■□ 3.35
CSNK1E-206ENST00000413574 GPHNQ9NQX3 736 aaPredicted RBP35.97■■■■□ 3.35
CSNK1E-206ENST00000413574 IFIT3O14879 490 aaKnown RBP35.97■■■■□ 3.35
CSNK1E-206ENST00000413574 SEC23AQ15436 765 aa35.97■■■■□ 3.35
CSNK1E-206ENST00000413574 IFNL1Q8IU54 200 aa35.97■■■■□ 3.35
CSNK1E-206ENST00000413574 PROCA1Q8NCQ7 364 aaPredicted RBP35.97■■■■□ 3.35
CSNK1E-206ENST00000413574 SENP2Q9HC62 589 aa35.97■■■■□ 3.35
CSNK1E-206ENST00000413574 DGKHQ86XP1 1220 aa35.96■■■■□ 3.35
CSNK1E-206ENST00000413574 TTC14Q96N46 770 aa35.96■■■■□ 3.35
CSNK1E-206ENST00000413574 F5H6K3 240 aa35.95■■■■□ 3.35
CSNK1E-206ENST00000413574 CASTP20810 708 aaKnown RBP35.95■■■■□ 3.35
CSNK1E-206ENST00000413574 KLRC3Q07444 240 aa35.95■■■■□ 3.35
CSNK1E-206ENST00000413574 PPP4R3BQ5MIZ7 849 aa35.95■■■■□ 3.35
CSNK1E-206ENST00000413574 IGDCC4Q8TDY8 1250 aa35.95■■■■□ 3.35
CSNK1E-206ENST00000413574 C12orf42Q96LP6 360 aa35.95■■■■□ 3.35
CSNK1E-206ENST00000413574 MTMR7Q9Y216 660 aa35.95■■■■□ 3.35
CSNK1E-206ENST00000413574 TOP1P11387 765 aaKnown RBP35.94■■■■□ 3.34
CSNK1E-206ENST00000413574 VCAM1P19320 739 aa35.94■■■■□ 3.34
CSNK1E-206ENST00000413574 CCDC178Q5BJE1 867 aa35.94■■■■□ 3.34
CSNK1E-206ENST00000413574 DHX32Q7L7V1 743 aaKnown RBP35.94■■■■□ 3.34
CSNK1E-206ENST00000413574 RASGRP2Q7LDG7 609 aa35.94■■■■□ 3.34
CSNK1E-206ENST00000413574 GOPCQ9HD26 462 aa35.94■■■■□ 3.34
CSNK1E-206ENST00000413574 EXOSC10Q01780 885 aaKnown RBP35.94■■■■□ 3.34
CSNK1E-206ENST00000413574 TMEM67Q5HYA8 995 aa35.94■■■■□ 3.34
CSNK1E-206ENST00000413574 C22orf23Q9BZE7 217 aa35.94■■■■□ 3.34
CSNK1E-206ENST00000413574 AGTPBP1Q9UPW5 1226 aa35.94■■■■□ 3.34
CSNK1E-206ENST00000413574 NDUFB10O96000 172 aa35.93■■■■□ 3.34
CSNK1E-206ENST00000413574 IFIT1BQ5T764 474 aaKnown RBP35.93■■■■□ 3.34
CSNK1E-206ENST00000413574 BLOC1S2Q6QNY1 142 aa35.93■■■■□ 3.34
CSNK1E-206ENST00000413574 REM2Q8IYK8 340 aaPredicted RBP35.93■■■■□ 3.34
CSNK1E-206ENST00000413574 ANKS1AQ92625 1134 aa35.93■■■■□ 3.34
CSNK1E-206ENST00000413574 PDHXO00330 501 aa35.92■■■■□ 3.34
CSNK1E-206ENST00000413574 PSMA5P28066 241 aa35.92■■■■□ 3.34
CSNK1E-206ENST00000413574 ANAPC15P60006 121 aa35.92■■■■□ 3.34
CSNK1E-206ENST00000413574 SART3Q15020 963 aaKnown RBP35.92■■■■□ 3.34
CSNK1E-206ENST00000413574 ANKRD23Q86SG2 305 aa35.92■■■■□ 3.34
CSNK1E-206ENST00000413574 NUP88Q99567 741 aaPredicted RBP35.92■■■■□ 3.34
CSNK1E-206ENST00000413574 ERICH2A1L162 156 aa35.91■■■■□ 3.34
CSNK1E-206ENST00000413574 HMGB1P09429 215 aaKnown RBP35.91■■■■□ 3.34
CSNK1E-206ENST00000413574 WTAPQ15007 396 aa35.91■■■■□ 3.34
CSNK1E-206ENST00000413574 GMCL1P1Q8NEA9 526 aa35.91■■■■□ 3.34
CSNK1E-206ENST00000413574 SLFN13Q68D06 897 aa35.9■■■■□ 3.34
CSNK1E-206ENST00000413574 UPF3BQ9BZI7 483 aaKnown RBP35.9■■■■□ 3.34
CSNK1E-206ENST00000413574 KAT14Q9H8E8 782 aa35.9■■■■□ 3.34
CSNK1E-206ENST00000413574 LY9Q9HBG7 655 aa35.9■■■■□ 3.34
CSNK1E-206ENST00000413574 ZSWIM6Q9HCJ5 1215 aa35.9■■■■□ 3.34
CSNK1E-206ENST00000413574 SYNPO2Q9UMS6 1093 aa35.9■■■■□ 3.34
CSNK1E-206ENST00000413574 SH2B2O14492 632 aaPredicted RBP35.9■■■■□ 3.34
CSNK1E-206ENST00000413574 RPS6KB1P23443 525 aa35.9■■■■□ 3.34
CSNK1E-206ENST00000413574 LPAR1Q92633 364 aa35.9■■■■□ 3.34
CSNK1E-206ENST00000413574 TMEM87BQ96K49 555 aa35.9■■■■□ 3.34
CSNK1E-206ENST00000413574 RPAP3Q9H6T3 665 aaPredicted RBP35.9■■■■□ 3.34
CSNK1E-206ENST00000413574 UPF2Q9HAU5 1272 aaKnown RBP35.9■■■■□ 3.34
CSNK1E-206ENST00000413574 PNMA1Q8ND90 353 aa35.89■■■■□ 3.34
CSNK1E-206ENST00000413574 TM6SF1Q9BZW5 370 aa35.89■■■■□ 3.34
CSNK1E-206ENST00000413574 FAM83BQ5T0W9 1011 aa35.88■■■■□ 3.33
CSNK1E-206ENST00000413574 RUFY3Q7L099 469 aa35.88■■■■□ 3.33
CSNK1E-206ENST00000413574 OTUD7BQ6GQQ9 843 aa35.87■■■■□ 3.33
CSNK1E-206ENST00000413574 WDR19Q8NEZ3 1342 aa35.87■■■■□ 3.33
CSNK1E-206ENST00000413574 CYP2C8P10632 490 aa35.86■■■■□ 3.33
CSNK1E-206ENST00000413574 MAP2K1Q02750 393 aaPredicted RBP35.86■■■■□ 3.33
CSNK1E-206ENST00000413574 JMYQ8N9B5 988 aa35.86■■■■□ 3.33
CSNK1E-206ENST00000413574 IL17RAQ96F46 866 aa35.86■■■■□ 3.33
CSNK1E-206ENST00000413574 MTA3Q9BTC8 594 aa35.86■■■■□ 3.33
CSNK1E-206ENST00000413574 RNF186Q9NXI6 227 aa35.86■■■■□ 3.33
CSNK1E-206ENST00000413574 CYP46A1Q9Y6A2 500 aa35.86■■■■□ 3.33
CSNK1E-206ENST00000413574 WDR46O15213 610 aaKnown RBP35.86■■■■□ 3.33
CSNK1E-206ENST00000413574 RBM25P49756 843 aaKnown RBP35.86■■■■□ 3.33
CSNK1E-206ENST00000413574 TANGO6Q9C0B7 1094 aa35.86■■■■□ 3.33
CSNK1E-206ENST00000413574 PARP14Q460N5 1801 aa35.85■■■■□ 3.33
CSNK1E-206ENST00000413574 TRPA1O75762 1119 aa35.85■■■■□ 3.33
CSNK1E-206ENST00000413574 HOXA7P31268 230 aaPredicted RBP35.85■■■■□ 3.33
CSNK1E-206ENST00000413574 Q6ZUG5 572 aa35.85■■■■□ 3.33
CSNK1E-206ENST00000413574 ASCC2Q9H1I8 757 aaPredicted RBP35.85■■■■□ 3.33
CSNK1E-206ENST00000413574 RLFQ13129 1914 aa35.84■■■■□ 3.33
CSNK1E-206ENST00000413574 USP17L15C9J2P7 530 aa35.84■■■■□ 3.33
CSNK1E-206ENST00000413574 USP17L13C9JLJ4 530 aa35.84■■■■□ 3.33
CSNK1E-206ENST00000413574 USP17L11C9JVI0 530 aa35.84■■■■□ 3.33
CSNK1E-206ENST00000413574 USP17L18D6R9N7 530 aa35.84■■■■□ 3.33
CSNK1E-206ENST00000413574 USP17L22D6RA61 530 aa35.84■■■■□ 3.33
CSNK1E-206ENST00000413574 USP17L17D6RBQ6 530 aa35.84■■■■□ 3.33
CSNK1E-206ENST00000413574 USP17L19D6RCP7 530 aa35.84■■■■□ 3.33
CSNK1E-206ENST00000413574 USP17L20D6RJB6 530 aa35.84■■■■□ 3.33
CSNK1E-206ENST00000413574 USP17L24Q0WX57 530 aa35.84■■■■□ 3.33
CSNK1E-206ENST00000413574 TAF1CQ15572 869 aaPredicted RBP35.84■■■■□ 3.33
CSNK1E-206ENST00000413574 CATSPERGQ6ZRH7 1159 aa35.84■■■■□ 3.33
CSNK1E-206ENST00000413574 KIF2CQ99661 725 aa35.84■■■■□ 3.33
CSNK1E-206ENST00000413574 WBP1LQ9NX94 342 aa35.83■■■■□ 3.33
CSNK1E-206ENST00000413574 ISY1Q9ULR0 285 aaKnown RBP35.83■■■■□ 3.33
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms