RNA–Protein interactions for RNA: ENST00000412686.5

CPSF4-202, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 745 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-202ENST00000412686 KIAA1683Q9H0B3 1180 aa9.15□□□□□ -0.94
CPSF4-202ENST00000412686 ZFYVE28Q9HCC9 887 aa9.15□□□□□ -0.94
CPSF4-202ENST00000412686 IL17RBQ9NRM6 502 aa9.15□□□□□ -0.94
CPSF4-202ENST00000412686 TMOD4Q9NZQ9 345 aa9.15□□□□□ -0.94
CPSF4-202ENST00000412686 TAOK2Q9UL54 1235 aa9.15□□□□□ -0.94
CPSF4-202ENST00000412686 RBM8AQ9Y5S9 174 aaKnown RBP9.15□□□□□ -0.94
CPSF4-202ENST00000412686 PARP14Q460N5 1801 aa9.15□□□□□ -0.95
CPSF4-202ENST00000412686 B4E1Z4 1266 aa9.14□□□□□ -0.95
CPSF4-202ENST00000412686 HAX1O00165 279 aa9.14□□□□□ -0.95
CPSF4-202ENST00000412686 ORC4O43929 436 aa9.14□□□□□ -0.95
CPSF4-202ENST00000412686 RAD21O60216 631 aa9.14□□□□□ -0.95
CPSF4-202ENST00000412686 TLR2O60603 784 aa9.14□□□□□ -0.95
CPSF4-202ENST00000412686 CYP21A2P08686 494 aa9.14□□□□□ -0.95
CPSF4-202ENST00000412686 COL9A3Q14050 684 aaPredicted RBP9.14□□□□□ -0.95
CPSF4-202ENST00000412686 IMMTQ16891 758 aaKnown RBP9.14□□□□□ -0.95
CPSF4-202ENST00000412686 POTEEQ6S8J3 1075 aa9.14□□□□□ -0.95
CPSF4-202ENST00000412686 MFSD6Q6ZSS7 791 aa9.14□□□□□ -0.95
CPSF4-202ENST00000412686 STOX1Q6ZVD7 989 aa9.14□□□□□ -0.95
CPSF4-202ENST00000412686 CD99L2Q8TCZ2 262 aa9.14□□□□□ -0.95
CPSF4-202ENST00000412686 MAP4K1Q92918 833 aa9.14□□□□□ -0.95
CPSF4-202ENST00000412686 PARK7Q99497 189 aaKnown RBP9.14□□□□□ -0.95
CPSF4-202ENST00000412686 ZKSCAN3Q9BRR0 538 aa9.14□□□□□ -0.95
CPSF4-202ENST00000412686 ARHGAP39Q9C0H5 1083 aa9.14□□□□□ -0.95
CPSF4-202ENST00000412686 ASCC2Q9H1I8 757 aaPredicted RBP9.14□□□□□ -0.95
CPSF4-202ENST00000412686 RPAP3Q9H6T3 665 aaPredicted RBP9.14□□□□□ -0.95
CPSF4-202ENST00000412686 VCPKMTQ9H867 229 aa9.14□□□□□ -0.95
CPSF4-202ENST00000412686 KANSL2Q9H9L4 492 aa9.14□□□□□ -0.95
CPSF4-202ENST00000412686 ZNF287Q9HBT7 754 aa9.14□□□□□ -0.95
CPSF4-202ENST00000412686 ARHGEF10LQ9HCE6 1279 aa9.14□□□□□ -0.95
CPSF4-202ENST00000412686 ZCCHC17Q9NP64 241 aaKnown RBP9.14□□□□□ -0.95
CPSF4-202ENST00000412686 ANO2Q9NQ90 1003 aa9.14□□□□□ -0.95
CPSF4-202ENST00000412686 PRDM10Q9NQV6 1147 aa9.14□□□□□ -0.95
CPSF4-202ENST00000412686 MTMR4Q9NYA4 1195 aa9.14□□□□□ -0.95
CPSF4-202ENST00000412686 CLIP2Q9UDT6 1046 aa9.14□□□□□ -0.95
CPSF4-202ENST00000412686 TMX2Q9Y320 296 aa9.14□□□□□ -0.95
CPSF4-202ENST00000412686 RLFQ13129 1914 aa9.13□□□□□ -0.95
CPSF4-202ENST00000412686 FKTNO75072 461 aa9.13□□□□□ -0.95
CPSF4-202ENST00000412686 CTGFP29279 349 aa9.13□□□□□ -0.95
CPSF4-202ENST00000412686 C17orf99Q6UX52 265 aa9.13□□□□□ -0.95
CPSF4-202ENST00000412686 ANKRD13CQ8N6S4 541 aa9.13□□□□□ -0.95
CPSF4-202ENST00000412686 SMCR8Q8TEV9 937 aaPredicted RBP9.13□□□□□ -0.95
CPSF4-202ENST00000412686 NUP88Q99567 741 aaPredicted RBP9.13□□□□□ -0.95
CPSF4-202ENST00000412686 P2RX7Q99572 595 aaKnown RBP9.13□□□□□ -0.95
CPSF4-202ENST00000412686 NYAP2Q9P242 653 aa9.13□□□□□ -0.95
CPSF4-202ENST00000412686 CTNNA3Q9UI47 895 aa9.13□□□□□ -0.95
CPSF4-202ENST00000412686 PCNTO95613 3336 aa9.12□□□□□ -0.95
CPSF4-202ENST00000412686 A0A0G2JMZ2 1700 aa9.12□□□□□ -0.95
CPSF4-202ENST00000412686 C19orf67A6NJJ6 358 aa9.12□□□□□ -0.95
CPSF4-202ENST00000412686 KDM4AO75164 1064 aa9.12□□□□□ -0.95
CPSF4-202ENST00000412686 TTLL1O95922 423 aa9.12□□□□□ -0.95
CPSF4-202ENST00000412686 NDUFB10O96000 172 aa9.12□□□□□ -0.95
CPSF4-202ENST00000412686 BCRP11274 1271 aa9.12□□□□□ -0.95
CPSF4-202ENST00000412686 OSBPP22059 807 aa9.12□□□□□ -0.95
CPSF4-202ENST00000412686 HOXA7P31268 230 aaPredicted RBP9.12□□□□□ -0.95
CPSF4-202ENST00000412686 USP14P54578 494 aa9.12□□□□□ -0.95
CPSF4-202ENST00000412686 IRX3P78415 501 aaPredicted RBP9.12□□□□□ -0.95
CPSF4-202ENST00000412686 SP3Q02447 781 aa9.12□□□□□ -0.95
CPSF4-202ENST00000412686 FAM83BQ5T0W9 1011 aa9.12□□□□□ -0.95
CPSF4-202ENST00000412686 CATSPERGQ6ZRH7 1159 aa9.12□□□□□ -0.95
CPSF4-202ENST00000412686 KIAA1211Q6ZU35 1233 aa9.12□□□□□ -0.95
CPSF4-202ENST00000412686 TANGO6Q9C0B7 1094 aa9.12□□□□□ -0.95
CPSF4-202ENST00000412686 RNF41Q9H4P4 317 aaPredicted RBP9.12□□□□□ -0.95
CPSF4-202ENST00000412686 TXNRD2Q9NNW7 524 aa9.12□□□□□ -0.95
CPSF4-202ENST00000412686 FBXO28Q9NVF7 368 aa9.12□□□□□ -0.95
CPSF4-202ENST00000412686 PNMA3Q9UL41 463 aa9.12□□□□□ -0.95
CPSF4-202ENST00000412686 STX8Q9UNK0 236 aa9.12□□□□□ -0.95
CPSF4-202ENST00000412686 MTMR7Q9Y216 660 aa9.12□□□□□ -0.95
CPSF4-202ENST00000412686 SLC45A1Q9Y2W3 748 aa9.12□□□□□ -0.95
CPSF4-202ENST00000412686 MGAMO43451 1857 aa9.12□□□□□ -0.95
CPSF4-202ENST00000412686 COL11A1P12107 1806 aaPredicted RBP9.12□□□□□ -0.95
CPSF4-202ENST00000412686 USP17L15C9J2P7 530 aa9.11□□□□□ -0.95
CPSF4-202ENST00000412686 USP17L13C9JLJ4 530 aa9.11□□□□□ -0.95
CPSF4-202ENST00000412686 USP17L11C9JVI0 530 aa9.11□□□□□ -0.95
CPSF4-202ENST00000412686 USP17L18D6R9N7 530 aa9.11□□□□□ -0.95
CPSF4-202ENST00000412686 USP17L22D6RA61 530 aa9.11□□□□□ -0.95
CPSF4-202ENST00000412686 USP17L17D6RBQ6 530 aa9.11□□□□□ -0.95
CPSF4-202ENST00000412686 USP17L19D6RCP7 530 aa9.11□□□□□ -0.95
CPSF4-202ENST00000412686 USP17L20D6RJB6 530 aa9.11□□□□□ -0.95
CPSF4-202ENST00000412686 E7EWF7 191 aa9.11□□□□□ -0.95
CPSF4-202ENST00000412686 F5H6K3 240 aa9.11□□□□□ -0.95
CPSF4-202ENST00000412686 SLC27A2O14975 620 aa9.11□□□□□ -0.95
CPSF4-202ENST00000412686 HERVK_113P62684 666 aa9.11□□□□□ -0.95
CPSF4-202ENST00000412686 KLRC3Q07444 240 aa9.11□□□□□ -0.95
CPSF4-202ENST00000412686 USP17L24Q0WX57 530 aa9.11□□□□□ -0.95
CPSF4-202ENST00000412686 PABPC4Q13310 644 aaKnown RBP eCLIP9.11□□□□□ -0.95
CPSF4-202ENST00000412686 NECTIN1Q15223 517 aa9.11□□□□□ -0.95
CPSF4-202ENST00000412686 NOM1Q5C9Z4 860 aaKnown RBP9.11□□□□□ -0.95
CPSF4-202ENST00000412686 CREB3L3Q68CJ9 461 aa9.11□□□□□ -0.95
CPSF4-202ENST00000412686 RCSD1Q6JBY9 416 aa9.11□□□□□ -0.95
CPSF4-202ENST00000412686 CASC1Q6TDU7 716 aa9.11□□□□□ -0.95
CPSF4-202ENST00000412686 CYB5R4Q7L1T6 521 aa9.11□□□□□ -0.95
CPSF4-202ENST00000412686 CHST3Q7LGC8 479 aa9.11□□□□□ -0.95
CPSF4-202ENST00000412686 ESR2Q92731 530 aa9.11□□□□□ -0.95
CPSF4-202ENST00000412686 PAGR1Q9BTK6 254 aa9.11□□□□□ -0.95
CPSF4-202ENST00000412686 SH2D4AQ9H788 454 aa9.11□□□□□ -0.95
CPSF4-202ENST00000412686 ZSWIM5Q9P217 1185 aa9.11□□□□□ -0.95
CPSF4-202ENST00000412686 SPDYE16A6NNV3 312 aaPredicted RBP9.1□□□□□ -0.95
CPSF4-202ENST00000412686 WDR46O15213 610 aaKnown RBP9.1□□□□□ -0.95
CPSF4-202ENST00000412686 CNMDO75829 334 aa9.1□□□□□ -0.95
CPSF4-202ENST00000412686 PCP11498 1178 aaKnown RBP9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms