RNA–Protein interactions for RNA: ENST00000410016.5

HOXD3-202, Transcript of homeobox D3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HOXD3, Length 2,384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3-202ENST00000410016 HIBADHP31937 336 aaKnown RBP18.09■□□□□ 0.49
HOXD3-202ENST00000410016 GSDMAQ96QA5 445 aa18.09■□□□□ 0.49
HOXD3-202ENST00000410016 BRMS1Q9HCU9 246 aa18.09■□□□□ 0.49
HOXD3-202ENST00000410016 TFCP2L1Q9NZI6 479 aa18.09■□□□□ 0.49
HOXD3-202ENST00000410016 ADAMTS3O15072 1205 aa18.08■□□□□ 0.48
HOXD3-202ENST00000410016 SBK1Q52WX2 424 aa18.08■□□□□ 0.48
HOXD3-202ENST00000410016 SPATA1Q5VX52 437 aa18.08■□□□□ 0.48
HOXD3-202ENST00000410016 RCSD1Q6JBY9 416 aa18.08■□□□□ 0.48
HOXD3-202ENST00000410016 CCDC34Q96HJ3 373 aa18.08■□□□□ 0.48
HOXD3-202ENST00000410016 CRNKL1Q9BZJ0 848 aaKnown RBP18.08■□□□□ 0.48
HOXD3-202ENST00000410016 FAM53CQ9NYF3 392 aa18.08■□□□□ 0.48
HOXD3-202ENST00000410016 PPP1R3GB7ZBB8 358 aa18.08■□□□□ 0.48
HOXD3-202ENST00000410016 CYP2D6P10635 497 aa18.08■□□□□ 0.48
HOXD3-202ENST00000410016 H2AFXP16104 143 aaPredicted RBP18.08■□□□□ 0.48
HOXD3-202ENST00000410016 PDE4CQ08493 712 aa18.08■□□□□ 0.48
HOXD3-202ENST00000410016 UTP14CQ5TAP6 766 aaKnown RBP18.08■□□□□ 0.48
HOXD3-202ENST00000410016 CTCFLQ8NI51 663 aaPredicted RBP18.08■□□□□ 0.48
HOXD3-202ENST00000410016 DLEC1Q9Y238 1755 aa18.07■□□□□ 0.48
HOXD3-202ENST00000410016 NPHP1O15259 732 aa18.07■□□□□ 0.48
HOXD3-202ENST00000410016 TEX33O43247 280 aa18.07■□□□□ 0.48
HOXD3-202ENST00000410016 SCG2P13521 617 aa18.07■□□□□ 0.48
HOXD3-202ENST00000410016 E2F4Q16254 413 aa18.07■□□□□ 0.48
HOXD3-202ENST00000410016 CNTNAP4Q9C0A0 1308 aa18.07■□□□□ 0.48
HOXD3-202ENST00000410016 PARP3Q9Y6F1 533 aa18.07■□□□□ 0.48
HOXD3-202ENST00000410016 IL17AQ16552 155 aa18.06■□□□□ 0.48
HOXD3-202ENST00000410016 PFKFB3Q16875 520 aaPredicted RBP18.06■□□□□ 0.48
HOXD3-202ENST00000410016 CDKAL1Q5VV42 579 aa18.06■□□□□ 0.48
HOXD3-202ENST00000410016 TOGARAM2Q6ZUX3 1019 aa18.06■□□□□ 0.48
HOXD3-202ENST00000410016 TXNRD3Q86VQ6 643 aa18.06■□□□□ 0.48
HOXD3-202ENST00000410016 NLRP3Q96P20 1036 aa18.06■□□□□ 0.48
HOXD3-202ENST00000410016 PBX1P40424 430 aa18.06■□□□□ 0.48
HOXD3-202ENST00000410016 TRAPPC10P48553 1259 aa18.06■□□□□ 0.48
HOXD3-202ENST00000410016 ZNF446Q9NWS9 450 aa18.06■□□□□ 0.48
HOXD3-202ENST00000410016 ARPP21Q9UBL0 812 aaPredicted RBP18.06■□□□□ 0.48
HOXD3-202ENST00000410016 NARFQ9UHQ1 456 aa18.06■□□□□ 0.48
HOXD3-202ENST00000410016 IRS2Q9Y4H2 1338 aa18.05■□□□□ 0.48
HOXD3-202ENST00000410016 TM4SF1P30408 202 aa18.05■□□□□ 0.48
HOXD3-202ENST00000410016 KLHL10Q6JEL2 608 aa18.05■□□□□ 0.48
HOXD3-202ENST00000410016 PIK3AP1Q6ZUJ8 805 aa18.05■□□□□ 0.48
HOXD3-202ENST00000410016 SMYD4Q8IYR2 804 aaPredicted RBP18.05■□□□□ 0.48
HOXD3-202ENST00000410016 MTRQ99707 1265 aa18.05■□□□□ 0.48
HOXD3-202ENST00000410016 ANKRD2Q9GZV1 360 aa18.05■□□□□ 0.48
HOXD3-202ENST00000410016 ADD3Q9UEY8 706 aaKnown RBP18.05■□□□□ 0.48
HOXD3-202ENST00000410016 MKRN1Q9UHC7 482 aaKnown RBP18.05■□□□□ 0.48
HOXD3-202ENST00000410016 ZNF831Q5JPB2 1677 aa18.05■□□□□ 0.48
HOXD3-202ENST00000410016 XDHP47989 1333 aa18.05■□□□□ 0.48
HOXD3-202ENST00000410016 STX17P56962 302 aa18.05■□□□□ 0.48
HOXD3-202ENST00000410016 PTF1AQ7RTS3 328 aa18.05■□□□□ 0.48
HOXD3-202ENST00000410016 GTPBP4Q9BZE4 634 aaKnown RBP18.05■□□□□ 0.48
HOXD3-202ENST00000410016 NYXQ9GZU5 481 aa18.05■□□□□ 0.48
HOXD3-202ENST00000410016 SRP68Q9UHB9 627 aaKnown RBP18.05■□□□□ 0.48
HOXD3-202ENST00000410016 BAZ2BQ9UIF8 2168 aaKnown RBP18.04■□□□□ 0.48
HOXD3-202ENST00000410016 ZBTB22O15209 634 aa18.04■□□□□ 0.48
HOXD3-202ENST00000410016 NLRP5P59047 1200 aa18.04■□□□□ 0.48
HOXD3-202ENST00000410016 PDXDC2PQ6P474 469 aa18.04■□□□□ 0.48
HOXD3-202ENST00000410016 WDR24Q96S15 920 aa18.04■□□□□ 0.48
HOXD3-202ENST00000410016 SETDB2Q96T68 719 aa18.04■□□□□ 0.48
HOXD3-202ENST00000410016 SYNRGQ9UMZ2 1314 aa18.04■□□□□ 0.48
HOXD3-202ENST00000410016 GOLGA6L9A6NEM1 432 aa18.04■□□□□ 0.48
HOXD3-202ENST00000410016 NUTM2BA6NNL0 878 aaPredicted RBP18.04■□□□□ 0.48
HOXD3-202ENST00000410016 NUTM2EB1AL46 878 aaPredicted RBP18.04■□□□□ 0.48
HOXD3-202ENST00000410016 TMED8Q6PL24 325 aaPredicted RBP18.04■□□□□ 0.48
HOXD3-202ENST00000410016 STAMQ92783 540 aa18.04■□□□□ 0.48
HOXD3-202ENST00000410016 PANX2Q96RD6 677 aa18.04■□□□□ 0.48
HOXD3-202ENST00000410016 SRRTQ9BXP5 876 aaKnown RBP18.04■□□□□ 0.48
HOXD3-202ENST00000410016 IL17RBQ9NRM6 502 aa18.04■□□□□ 0.48
HOXD3-202ENST00000410016 CASZ1Q86V15 1759 aa18.04■□□□□ 0.48
HOXD3-202ENST00000410016 TSPY2A6NKD2 308 aa18.03■□□□□ 0.48
HOXD3-202ENST00000410016 URI1O94763 535 aaPredicted RBP18.03■□□□□ 0.48
HOXD3-202ENST00000410016 NBPF5PQ86XG9 351 aaPredicted RBP18.03■□□□□ 0.48
HOXD3-202ENST00000410016 CCDC24Q8N4L8 307 aa18.03■□□□□ 0.48
HOXD3-202ENST00000410016 C4orf32Q8N8J7 132 aa18.03■□□□□ 0.48
HOXD3-202ENST00000410016 IQUBQ8NA54 791 aa18.03■□□□□ 0.48
HOXD3-202ENST00000410016 MYH13Q9UKX3 1938 aa18.03■□□□□ 0.48
HOXD3-202ENST00000410016 AKR1B15C9JRZ8 316 aaPredicted RBP18.03■□□□□ 0.48
HOXD3-202ENST00000410016 USP17L8P0C7I0 530 aa18.03■□□□□ 0.48
HOXD3-202ENST00000410016 RC3H1Q5TC82 1133 aaKnown RBP18.03■□□□□ 0.48
HOXD3-202ENST00000410016 MCM9Q9NXL9 1143 aa18.03■□□□□ 0.48
HOXD3-202ENST00000410016 JAG2Q9Y219 1238 aa18.03■□□□□ 0.48
HOXD3-202ENST00000410016 RPS6KA4O75676 772 aa18.02■□□□□ 0.48
HOXD3-202ENST00000410016 MCM7P33993 719 aa18.02■□□□□ 0.48
HOXD3-202ENST00000410016 RBL2Q08999 1139 aa18.02■□□□□ 0.48
HOXD3-202ENST00000410016 FAM177A1Q8N128 213 aaPredicted RBP18.02■□□□□ 0.48
HOXD3-202ENST00000410016 LRRC10BA6NIK2 292 aa18.02■□□□□ 0.47
HOXD3-202ENST00000410016 TADA3O75528 432 aa18.02■□□□□ 0.47
HOXD3-202ENST00000410016 MAP3K9P80192 1104 aa18.02■□□□□ 0.47
HOXD3-202ENST00000410016 MTF1Q14872 753 aa18.02■□□□□ 0.47
HOXD3-202ENST00000410016 FAM98CQ17RN3 349 aaKnown RBP18.02■□□□□ 0.47
HOXD3-202ENST00000410016 ARHGAP29Q52LW3 1261 aa18.02■□□□□ 0.47
HOXD3-202ENST00000410016 C12orf60Q5U649 245 aa18.02■□□□□ 0.47
HOXD3-202ENST00000410016 IGSF22Q8N9C0 903 aa18.02■□□□□ 0.47
HOXD3-202ENST00000410016 ANKS1AQ92625 1134 aa18.02■□□□□ 0.47
HOXD3-202ENST00000410016 CTAGE1Q96RT6 745 aa18.02■□□□□ 0.47
HOXD3-202ENST00000410016 BLZF1Q9H2G9 400 aa18.02■□□□□ 0.47
HOXD3-202ENST00000410016 KIF5BP33176 963 aa18.01■□□□□ 0.47
HOXD3-202ENST00000410016 GNG11P61952 73 aa18.01■□□□□ 0.47
HOXD3-202ENST00000410016 ARL6IP4Q66PJ3 421 aaKnown RBP18.01■□□□□ 0.47
HOXD3-202ENST00000410016 TPTE2Q6XPS3 522 aa18.01■□□□□ 0.47
HOXD3-202ENST00000410016 DGKHQ86XP1 1220 aa18.01■□□□□ 0.47
HOXD3-202ENST00000410016 KIFC2Q96AC6 838 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms