RNA–Protein interactions for RNA: ENST00000409772.5

PDE6D-202, Transcript of phosphodiesterase 6D, humanhuman

TSL 3 BASIC

Gene PDE6D, Length 672 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6D-202ENST00000409772 MAPK4P31152 587 aa20.32■□□□□ 0.84
PDE6D-202ENST00000409772 TTC22Q5TAA0 569 aa20.32■□□□□ 0.84
PDE6D-202ENST00000409772 CWC27Q6UX04 472 aaKnown RBP20.32■□□□□ 0.84
PDE6D-202ENST00000409772 TMEM106CQ9BVX2 250 aa20.32■□□□□ 0.84
PDE6D-202ENST00000409772 RBPJLQ9UBG7 517 aa20.32■□□□□ 0.84
PDE6D-202ENST00000409772 ZMYM6O95789 1325 aa20.31■□□□□ 0.84
PDE6D-202ENST00000409772 WDR46O15213 610 aaKnown RBP20.31■□□□□ 0.84
PDE6D-202ENST00000409772 ECM2O94769 699 aaPredicted RBP20.31■□□□□ 0.84
PDE6D-202ENST00000409772 PCP11498 1178 aaKnown RBP20.31■□□□□ 0.84
PDE6D-202ENST00000409772 ERVK-9P63128 1117 aa20.31■□□□□ 0.84
PDE6D-202ENST00000409772 ERVK-24P63145 666 aa20.31■□□□□ 0.84
PDE6D-202ENST00000409772 VPS53Q5VIR6 699 aa20.31■□□□□ 0.84
PDE6D-202ENST00000409772 CENPQQ7L2Z9 268 aaPredicted RBP20.31■□□□□ 0.84
PDE6D-202ENST00000409772 MB21D1Q8N884 522 aa20.31■□□□□ 0.84
PDE6D-202ENST00000409772 NEDD1Q8NHV4 660 aa20.31■□□□□ 0.84
PDE6D-202ENST00000409772 RUFY2Q8WXA3 655 aa20.31■□□□□ 0.84
PDE6D-202ENST00000409772 TANGO6Q9C0B7 1094 aa20.31■□□□□ 0.84
PDE6D-202ENST00000409772 PRDM1O75626 825 aa20.3■□□□□ 0.84
PDE6D-202ENST00000409772 TTLL1O95922 423 aa20.3■□□□□ 0.84
PDE6D-202ENST00000409772 GRK4P32298 578 aa20.3■□□□□ 0.84
PDE6D-202ENST00000409772 TFAP4Q01664 338 aa20.3■□□□□ 0.84
PDE6D-202ENST00000409772 IRF5Q13568 498 aa20.3■□□□□ 0.84
PDE6D-202ENST00000409772 SLAIN1Q8ND83 568 aa20.3■□□□□ 0.84
PDE6D-202ENST00000409772 PXYLP1Q8TE99 480 aa20.3■□□□□ 0.84
PDE6D-202ENST00000409772 MKL1Q969V6 931 aa20.3■□□□□ 0.84
PDE6D-202ENST00000409772 PAGR1Q9BTK6 254 aa20.3■□□□□ 0.84
PDE6D-202ENST00000409772 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.3■□□□□ 0.84
PDE6D-202ENST00000409772 NEFLP07196 543 aa20.29■□□□□ 0.84
PDE6D-202ENST00000409772 FLT3LGP49771 235 aa20.29■□□□□ 0.84
PDE6D-202ENST00000409772 NT5C2P49902 561 aa20.29■□□□□ 0.84
PDE6D-202ENST00000409772 UBXN2AP68543 259 aa20.29■□□□□ 0.84
PDE6D-202ENST00000409772 PRKCZQ05513 592 aa20.29■□□□□ 0.84
PDE6D-202ENST00000409772 CWC22Q9HCG8 908 aaKnown RBP20.29■□□□□ 0.84
PDE6D-202ENST00000409772 MTMR4Q9NYA4 1195 aa20.29■□□□□ 0.84
PDE6D-202ENST00000409772 CLIP2Q9UDT6 1046 aa20.29■□□□□ 0.84
PDE6D-202ENST00000409772 TSPY2A6NKD2 308 aa20.28■□□□□ 0.84
PDE6D-202ENST00000409772 FOXP2O15409 715 aa20.28■□□□□ 0.84
PDE6D-202ENST00000409772 ORC4O43929 436 aa20.28■□□□□ 0.84
PDE6D-202ENST00000409772 RAD21O60216 631 aa20.28■□□□□ 0.84
PDE6D-202ENST00000409772 ZNF589Q86UQ0 364 aaPredicted RBP20.28■□□□□ 0.84
PDE6D-202ENST00000409772 ZNF333Q96JL9 665 aa20.28■□□□□ 0.84
PDE6D-202ENST00000409772 RNF41Q9H4P4 317 aaPredicted RBP20.28■□□□□ 0.84
PDE6D-202ENST00000409772 TXNRD2Q9NNW7 524 aa20.28■□□□□ 0.84
PDE6D-202ENST00000409772 BIN2Q9UBW5 565 aaPredicted RBP20.28■□□□□ 0.84
PDE6D-202ENST00000409772 CTNNA3Q9UI47 895 aa20.28■□□□□ 0.84
PDE6D-202ENST00000409772 IGKV6D-41A0A0C4DH26 115 aa20.27■□□□□ 0.84
PDE6D-202ENST00000409772 SPDYE16A6NNV3 312 aaPredicted RBP20.27■□□□□ 0.84
PDE6D-202ENST00000409772 ZNF213O14771 459 aa20.27■□□□□ 0.84
PDE6D-202ENST00000409772 RANBP6O60518 1105 aaKnown RBP20.27■□□□□ 0.84
PDE6D-202ENST00000409772 FLOT1O75955 427 aa20.27■□□□□ 0.84
PDE6D-202ENST00000409772 FGRP09769 529 aa20.27■□□□□ 0.84
PDE6D-202ENST00000409772 DSG3P32926 999 aa20.27■□□□□ 0.84
PDE6D-202ENST00000409772 CTDSPL2Q05D32 466 aa20.27■□□□□ 0.84
PDE6D-202ENST00000409772 Q3C1V9 767 aa20.27■□□□□ 0.84
PDE6D-202ENST00000409772 CLEC10AQ8IUN9 316 aa20.27■□□□□ 0.84
PDE6D-202ENST00000409772 SPICE1Q8N0Z3 855 aa20.27■□□□□ 0.84
PDE6D-202ENST00000409772 NUDT12Q9BQG2 462 aa20.27■□□□□ 0.84
PDE6D-202ENST00000409772 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.27■□□□□ 0.84
PDE6D-202ENST00000409772 MGAMO43451 1857 aa20.26■□□□□ 0.83
PDE6D-202ENST00000409772 PLIN4Q96Q06 1357 aa20.26■□□□□ 0.83
PDE6D-202ENST00000409772 F5H6K3 240 aa20.26■□□□□ 0.83
PDE6D-202ENST00000409772 ADCY3O60266 1144 aa20.26■□□□□ 0.83
PDE6D-202ENST00000409772 MLLT1Q03111 559 aaPredicted RBP20.26■□□□□ 0.83
PDE6D-202ENST00000409772 KLRC3Q07444 240 aa20.26■□□□□ 0.83
PDE6D-202ENST00000409772 MFSD6Q6ZSS7 791 aa20.26■□□□□ 0.83
PDE6D-202ENST00000409772 PLEKHH3Q7Z736 793 aa20.26■□□□□ 0.83
PDE6D-202ENST00000409772 SOCS4Q8WXH5 440 aa20.26■□□□□ 0.83
PDE6D-202ENST00000409772 CEP95Q96GE4 821 aa20.26■□□□□ 0.83
PDE6D-202ENST00000409772 DSCC1Q9BVC3 393 aa20.26■□□□□ 0.83
PDE6D-202ENST00000409772 TOMM22Q9NS69 142 aa20.26■□□□□ 0.83
PDE6D-202ENST00000409772 GABRQQ9UN88 632 aa20.26■□□□□ 0.83
PDE6D-202ENST00000409772 GSPT1P15170 499 aaKnown RBP20.25■□□□□ 0.83
PDE6D-202ENST00000409772 CAPN2P17655 700 aa20.25■□□□□ 0.83
PDE6D-202ENST00000409772 SOX10P56693 466 aa20.25■□□□□ 0.83
PDE6D-202ENST00000409772 FAM47AQ5JRC9 791 aa20.25■□□□□ 0.83
PDE6D-202ENST00000409772 TRMT44Q8IYL2 757 aaKnown RBP20.25■□□□□ 0.83
PDE6D-202ENST00000409772 SH3TC2Q8TF17 1288 aa20.25■□□□□ 0.83
PDE6D-202ENST00000409772 GJD2Q9UKL4 321 aa20.25■□□□□ 0.83
PDE6D-202ENST00000409772 IVNS1ABPQ9Y6Y0 642 aa20.25■□□□□ 0.83
PDE6D-202ENST00000409772 RAD50Q92878 1312 aa20.25■□□□□ 0.83
PDE6D-202ENST00000409772 STRNO43815 780 aa20.24■□□□□ 0.83
PDE6D-202ENST00000409772 KIAA1755Q5JYT7 1200 aa20.24■□□□□ 0.83
PDE6D-202ENST00000409772 AKNAD1Q5T1N1 836 aa20.24■□□□□ 0.83
PDE6D-202ENST00000409772 GMCL1P1Q8NEA9 526 aa20.24■□□□□ 0.83
PDE6D-202ENST00000409772 XRCC5P13010 732 aaKnown RBP20.23■□□□□ 0.83
PDE6D-202ENST00000409772 IMMTQ16891 758 aaKnown RBP20.23■□□□□ 0.83
PDE6D-202ENST00000409772 GPR142Q7Z601 462 aa20.23■□□□□ 0.83
PDE6D-202ENST00000409772 SHCBP1Q8NEM2 672 aa20.23■□□□□ 0.83
PDE6D-202ENST00000409772 NKX2-3Q8TAU0 364 aa20.23■□□□□ 0.83
PDE6D-202ENST00000409772 CCDC136Q96JN2 1154 aa20.23■□□□□ 0.83
PDE6D-202ENST00000409772 TCP11L1Q9NUJ3 509 aa20.23■□□□□ 0.83
PDE6D-202ENST00000409772 STX8Q9UNK0 236 aa20.23■□□□□ 0.83
PDE6D-202ENST00000409772 CNMDO75829 334 aa20.22■□□□□ 0.83
PDE6D-202ENST00000409772 CENPBP07199 599 aaPredicted RBP20.22■□□□□ 0.83
PDE6D-202ENST00000409772 CCDC178Q5BJE1 867 aa20.22■□□□□ 0.83
PDE6D-202ENST00000409772 RRP12Q5JTH9 1297 aaKnown RBP20.22■□□□□ 0.83
PDE6D-202ENST00000409772 FAM83BQ5T0W9 1011 aa20.22■□□□□ 0.83
PDE6D-202ENST00000409772 PRPF38AQ8NAV1 312 aaKnown RBP20.22■□□□□ 0.83
PDE6D-202ENST00000409772 STAG1Q8WVM7 1258 aa20.22■□□□□ 0.83
PDE6D-202ENST00000409772 TTC14Q96N46 770 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms