RNA–Protein interactions for RNA: ENST00000409769.6

CLK1-203, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 1,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-203ENST00000409769 DTWD2Q8NBA8 298 aa7.32□□□□□ -1.24
CLK1-203ENST00000409769 PPP1R13LQ8WUF5 828 aa7.32□□□□□ -1.24
CLK1-203ENST00000409769 GATAD2BQ8WXI9 593 aa7.32□□□□□ -1.24
CLK1-203ENST00000409769 VTI1BQ9UEU0 232 aa7.32□□□□□ -1.24
CLK1-203ENST00000409769 TLR6Q9Y2C9 796 aa7.32□□□□□ -1.24
CLK1-203ENST00000409769 PRR36Q9H6K5 1346 aa7.31□□□□□ -1.24
CLK1-203ENST00000409769 FITM1A5D6W6 292 aa7.31□□□□□ -1.24
CLK1-203ENST00000409769 KRT1P04264 644 aa7.31□□□□□ -1.24
CLK1-203ENST00000409769 GLDCP23378 1020 aa7.31□□□□□ -1.24
CLK1-203ENST00000409769 NR0B2Q15466 257 aa7.31□□□□□ -1.24
CLK1-203ENST00000409769 ASPNQ9BXN1 380 aa7.31□□□□□ -1.24
CLK1-203ENST00000409769 TCAF2A6NFQ2 919 aa7.3□□□□□ -1.24
CLK1-203ENST00000409769 EGR3Q06889 387 aa7.3□□□□□ -1.24
CLK1-203ENST00000409769 CAMK2GQ13555 558 aaPredicted RBP7.3□□□□□ -1.24
CLK1-203ENST00000409769 IRF2BP1Q8IU81 584 aa7.3□□□□□ -1.24
CLK1-203ENST00000409769 SPPL2CQ8IUH8 684 aa7.3□□□□□ -1.24
CLK1-203ENST00000409769 SLC6A17Q9H1V8 727 aa7.3□□□□□ -1.24
CLK1-203ENST00000409769 ADAMTS10Q9H324 1103 aa7.3□□□□□ -1.24
CLK1-203ENST00000409769 CWC22Q9HCG8 908 aaKnown RBP7.3□□□□□ -1.24
CLK1-203ENST00000409769 FAM221AA4D161 298 aa7.29□□□□□ -1.24
CLK1-203ENST00000409769 LTKP29376 864 aa7.29□□□□□ -1.24
CLK1-203ENST00000409769 CHRNEQ04844 493 aa7.29□□□□□ -1.24
CLK1-203ENST00000409769 DUSP4Q13115 394 aa7.29□□□□□ -1.24
CLK1-203ENST00000409769 LDLRAD1Q5T700 205 aa7.29□□□□□ -1.24
CLK1-203ENST00000409769 AMIGO3Q86WK7 504 aa7.29□□□□□ -1.24
CLK1-203ENST00000409769 RELL1Q8IUW5 271 aa7.29□□□□□ -1.24
CLK1-203ENST00000409769 CCDC74BQ96LY2 380 aa7.29□□□□□ -1.24
CLK1-203ENST00000409769 RSRP1Q9BUV0 290 aa7.29□□□□□ -1.24
CLK1-203ENST00000409769 CD320Q9NPF0 282 aa7.29□□□□□ -1.24
CLK1-203ENST00000409769 RAPGEFL1Q9UHV5 662 aa7.29□□□□□ -1.24
CLK1-203ENST00000409769 CORINQ9Y5Q5 1042 aa7.29□□□□□ -1.24
CLK1-203ENST00000409769 ZGLP1P0C6A0 271 aa7.28□□□□□ -1.24
CLK1-203ENST00000409769 ZSCAN22P10073 491 aaPredicted RBP7.28□□□□□ -1.24
CLK1-203ENST00000409769 TNNI2P48788 182 aa7.28□□□□□ -1.24
CLK1-203ENST00000409769 MLECQ14165 292 aa7.28□□□□□ -1.24
CLK1-203ENST00000409769 SNX17Q15036 470 aa7.28□□□□□ -1.24
CLK1-203ENST00000409769 KCNA10Q16322 511 aa7.28□□□□□ -1.24
CLK1-203ENST00000409769 PODXL2Q9NZ53 605 aa7.28□□□□□ -1.24
CLK1-203ENST00000409769 PF4P02776 101 aa7.27□□□□□ -1.25
CLK1-203ENST00000409769 CHMP4BP1P59074 171 aa7.27□□□□□ -1.25
CLK1-203ENST00000409769 ERVFC1P60507 584 aa7.27□□□□□ -1.25
CLK1-203ENST00000409769 MPP2Q14168 576 aa7.27□□□□□ -1.25
CLK1-203ENST00000409769 CIAPIN1Q6FI81 312 aa7.27□□□□□ -1.25
CLK1-203ENST00000409769 BNC2Q6ZN30 1099 aaPredicted RBP7.27□□□□□ -1.25
CLK1-203ENST00000409769 ATG14Q6ZNE5 492 aa7.27□□□□□ -1.25
CLK1-203ENST00000409769 ANKS4BQ8N8V4 417 aa7.27□□□□□ -1.25
CLK1-203ENST00000409769 RHOVQ96L33 236 aa7.27□□□□□ -1.25
CLK1-203ENST00000409769 TMEM74Q96NL1 305 aa7.27□□□□□ -1.25
CLK1-203ENST00000409769 REV1Q9UBZ9 1251 aa7.27□□□□□ -1.25
CLK1-203ENST00000409769 BICRAQ9NZM4 1560 aa7.26□□□□□ -1.25
CLK1-203ENST00000409769 SHROOM4Q9ULL8 1493 aa7.26□□□□□ -1.25
CLK1-203ENST00000409769 WASH4PA8MWX3 477 aa7.26□□□□□ -1.25
CLK1-203ENST00000409769 UPK3BL1B0FP48 263 aa7.26□□□□□ -1.25
CLK1-203ENST00000409769 UPK3BL2E5RIL1 263 aa7.26□□□□□ -1.25
CLK1-203ENST00000409769 NPIPB6E9PJ23 425 aa7.26□□□□□ -1.25
CLK1-203ENST00000409769 LCE4AQ5TA78 99 aa7.26□□□□□ -1.25
CLK1-203ENST00000409769 LCNL1Q6ZST4 164 aa7.26□□□□□ -1.25
CLK1-203ENST00000409769 ERMP1Q7Z2K6 904 aa7.26□□□□□ -1.25
CLK1-203ENST00000409769 ENOX1Q8TC92 643 aaKnown RBP7.26□□□□□ -1.25
CLK1-203ENST00000409769 KCNN1Q92952 543 aa7.26□□□□□ -1.25
CLK1-203ENST00000409769 KREMEN1Q96MU8 473 aa7.26□□□□□ -1.25
CLK1-203ENST00000409769 KRTAP4-9Q9BYQ8 210 aa7.26□□□□□ -1.25
CLK1-203ENST00000409769 RNF32Q9H0A6 362 aa7.26□□□□□ -1.25
CLK1-203ENST00000409769 ASCC2Q9H1I8 757 aaPredicted RBP7.26□□□□□ -1.25
CLK1-203ENST00000409769 PCDHA11Q9Y5I1 949 aa7.26□□□□□ -1.25
CLK1-203ENST00000409769 PEX10O60683 326 aa7.25□□□□□ -1.25
CLK1-203ENST00000409769 HTR3BO95264 441 aa7.25□□□□□ -1.25
CLK1-203ENST00000409769 F13A1P00488 732 aa7.25□□□□□ -1.25
CLK1-203ENST00000409769 GBP2P32456 591 aaPredicted RBP7.25□□□□□ -1.25
CLK1-203ENST00000409769 CLEC16AQ2KHT3 1053 aa7.25□□□□□ -1.25
CLK1-203ENST00000409769 PHACTR4Q8IZ21 702 aa7.25□□□□□ -1.25
CLK1-203ENST00000409769 SP110Q9HB58 689 aa7.25□□□□□ -1.25
CLK1-203ENST00000409769 METTL5Q9NRN9 209 aaKnown RBP7.25□□□□□ -1.25
CLK1-203ENST00000409769 ETV2O00321 342 aaPredicted RBP7.24□□□□□ -1.25
CLK1-203ENST00000409769 SEMA7AO75326 666 aa7.24□□□□□ -1.25
CLK1-203ENST00000409769 RNF4P78317 190 aa7.24□□□□□ -1.25
CLK1-203ENST00000409769 SNAP47Q5SQN1 464 aa7.24□□□□□ -1.25
CLK1-203ENST00000409769 KLHL3Q9UH77 587 aa7.24□□□□□ -1.25
CLK1-203ENST00000409769 SMG5Q9UPR3 1016 aaKnown RBP7.24□□□□□ -1.25
CLK1-203ENST00000409769 YBX2Q9Y2T7 364 aaKnown RBP7.24□□□□□ -1.25
CLK1-203ENST00000409769 ROBO2Q9HCK4 1378 aa7.23□□□□□ -1.25
CLK1-203ENST00000409769 REC114Q7Z4M0 266 aa7.23□□□□□ -1.25
CLK1-203ENST00000409769 BAHD1Q8TBE0 780 aaPredicted RBP7.23□□□□□ -1.25
CLK1-203ENST00000409769 INTS4Q96HW7 963 aaKnown RBP7.23□□□□□ -1.25
CLK1-203ENST00000409769 BACH2Q9BYV9 841 aa7.23□□□□□ -1.25
CLK1-203ENST00000409769 KCNQ5Q9NR82 932 aa7.23□□□□□ -1.25
CLK1-203ENST00000409769 CHURC1-FNTBB4DL54 471 aa7.22□□□□□ -1.25
CLK1-203ENST00000409769 RECKO95980 971 aa7.22□□□□□ -1.25
CLK1-203ENST00000409769 GBP1P32455 592 aa7.22□□□□□ -1.25
CLK1-203ENST00000409769 TRHRP34981 398 aaPredicted RBP7.22□□□□□ -1.25
CLK1-203ENST00000409769 LINC00310P59036 64 aa7.22□□□□□ -1.25
CLK1-203ENST00000409769 TEKQ02763 1124 aa7.22□□□□□ -1.25
CLK1-203ENST00000409769 RNF111Q6ZNA4 994 aa7.22□□□□□ -1.25
CLK1-203ENST00000409769 TMEM87AQ8NBN3 555 aa7.22□□□□□ -1.25
CLK1-203ENST00000409769 MRRFQ96E11 262 aaKnown RBP7.22□□□□□ -1.25
CLK1-203ENST00000409769 KIAA1522Q9P206 1035 aaPredicted RBP7.22□□□□□ -1.25
CLK1-203ENST00000409769 POLR3KQ9Y2Y1 108 aaPredicted RBP7.22□□□□□ -1.25
CLK1-203ENST00000409769 UNCXA6NJT0 531 aa7.21□□□□□ -1.26
CLK1-203ENST00000409769 RGS13O14921 159 aa7.21□□□□□ -1.26
CLK1-203ENST00000409769 LRRN2O75325 713 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms