RNA–Protein interactions for RNA: ENST00000409543.6

TSPAN4-209, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,031 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-209ENST00000409543 PORCNQ9H237 461 aa23.46■■□□□ 1.35
TSPAN4-209ENST00000409543 PLXNB2O15031 1838 aa23.45■■□□□ 1.34
TSPAN4-209ENST00000409543 SPDYE16A6NNV3 312 aaPredicted RBP23.45■■□□□ 1.34
TSPAN4-209ENST00000409543 CCNA1P78396 465 aa23.45■■□□□ 1.34
TSPAN4-209ENST00000409543 COG2Q14746 738 aa23.45■■□□□ 1.34
TSPAN4-209ENST00000409543 KIAA1755Q5JYT7 1200 aa23.45■■□□□ 1.34
TSPAN4-209ENST00000409543 IFNL3Q8IZI9 196 aa23.45■■□□□ 1.34
TSPAN4-209ENST00000409543 EVI5LQ96CN4 794 aa23.45■■□□□ 1.34
TSPAN4-209ENST00000409543 SHISA4Q96DD7 197 aa23.45■■□□□ 1.34
TSPAN4-209ENST00000409543 NUDT12Q9BQG2 462 aa23.45■■□□□ 1.34
TSPAN4-209ENST00000409543 NACAP1Q9BZK3 213 aa23.45■■□□□ 1.34
TSPAN4-209ENST00000409543 VCPKMTQ9H867 229 aa23.45■■□□□ 1.34
TSPAN4-209ENST00000409543 MKNK2Q9HBH9 465 aa23.45■■□□□ 1.34
TSPAN4-209ENST00000409543 HOXC10Q9NYD6 342 aa23.45■■□□□ 1.34
TSPAN4-209ENST00000409543 MKI67P46013 3256 aaKnown RBP23.45■■□□□ 1.34
TSPAN4-209ENST00000409543 XRCC5P13010 732 aaKnown RBP23.44■■□□□ 1.34
TSPAN4-209ENST00000409543 EEF2P13639 858 aaKnown RBP23.44■■□□□ 1.34
TSPAN4-209ENST00000409543 GPR142Q7Z601 462 aa23.44■■□□□ 1.34
TSPAN4-209ENST00000409543 PLEKHH3Q7Z736 793 aa23.44■■□□□ 1.34
TSPAN4-209ENST00000409543 TANGO6Q9C0B7 1094 aa23.44■■□□□ 1.34
TSPAN4-209ENST00000409543 IGHDP01880 384 aa23.43■■□□□ 1.34
TSPAN4-209ENST00000409543 HMGCRP04035 888 aa23.43■■□□□ 1.34
TSPAN4-209ENST00000409543 RASA1P20936 1047 aa23.43■■□□□ 1.34
TSPAN4-209ENST00000409543 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.43■■□□□ 1.34
TSPAN4-209ENST00000409543 LNPKQ9C0E8 428 aa23.43■■□□□ 1.34
TSPAN4-209ENST00000409543 BTBD7Q9P203 1132 aa23.43■■□□□ 1.34
TSPAN4-209ENST00000409543 CAPN2P17655 700 aa23.42■■□□□ 1.34
TSPAN4-209ENST00000409543 CYP2B6P20813 491 aa23.42■■□□□ 1.34
TSPAN4-209ENST00000409543 MORN1Q5T089 497 aa23.42■■□□□ 1.34
TSPAN4-209ENST00000409543 TICAM2Q86XR7 235 aa23.42■■□□□ 1.34
TSPAN4-209ENST00000409543 STK11IPQ8N1F8 1099 aa23.42■■□□□ 1.34
TSPAN4-209ENST00000409543 U2AF1L4Q8WU68 220 aaKnown RBP23.42■■□□□ 1.34
TSPAN4-209ENST00000409543 USP6NLQ92738 828 aa23.42■■□□□ 1.34
TSPAN4-209ENST00000409543 ZNF287Q9HBT7 754 aa23.42■■□□□ 1.34
TSPAN4-209ENST00000409543 SUPT16HQ9Y5B9 1047 aaKnown RBP23.42■■□□□ 1.34
TSPAN4-209ENST00000409543 WDR46O15213 610 aaKnown RBP23.41■■□□□ 1.34
TSPAN4-209ENST00000409543 SGPL1O95470 568 aa23.41■■□□□ 1.34
TSPAN4-209ENST00000409543 ATP2B2Q01814 1243 aa23.41■■□□□ 1.34
TSPAN4-209ENST00000409543 B4GALNT3Q6L9W6 998 aa23.41■■□□□ 1.34
TSPAN4-209ENST00000409543 SPICE1Q8N0Z3 855 aa23.41■■□□□ 1.34
TSPAN4-209ENST00000409543 CWC22Q9HCG8 908 aaKnown RBP23.41■■□□□ 1.34
TSPAN4-209ENST00000409543 PAK6Q9NQU5 681 aaPredicted RBP23.41■■□□□ 1.34
TSPAN4-209ENST00000409543 RLFQ13129 1914 aa23.4■■□□□ 1.34
TSPAN4-209ENST00000409543 GREB1LQ9C091 1923 aaPredicted RBP23.4■■□□□ 1.34
TSPAN4-209ENST00000409543 CHD1LQ86WJ1 897 aa23.4■■□□□ 1.34
TSPAN4-209ENST00000409543 TRMT44Q8IYL2 757 aaKnown RBP23.4■■□□□ 1.34
TSPAN4-209ENST00000409543 ZNF444Q8N0Y2 327 aaPredicted RBP23.4■■□□□ 1.34
TSPAN4-209ENST00000409543 TRIB2Q92519 343 aa23.4■■□□□ 1.34
TSPAN4-209ENST00000409543 NAPBQ9H115 298 aa23.4■■□□□ 1.34
TSPAN4-209ENST00000409543 GOPCQ9HD26 462 aa23.4■■□□□ 1.34
TSPAN4-209ENST00000409543 FLOT1O75955 427 aa23.39■■□□□ 1.33
TSPAN4-209ENST00000409543 DSG3P32926 999 aa23.39■■□□□ 1.33
TSPAN4-209ENST00000409543 RGS2P41220 211 aa23.39■■□□□ 1.33
TSPAN4-209ENST00000409543 NUCB1Q02818 461 aa23.39■■□□□ 1.33
TSPAN4-209ENST00000409543 MB21D1Q8N884 522 aa23.39■■□□□ 1.33
TSPAN4-209ENST00000409543 DEFB118Q96PH6 123 aa23.39■■□□□ 1.33
TSPAN4-209ENST00000409543 NYAP2Q9P242 653 aa23.39■■□□□ 1.33
TSPAN4-209ENST00000409543 RPTORQ8N122 1335 aa23.38■■□□□ 1.33
TSPAN4-209ENST00000409543 CCDC129Q6ZRS4 1044 aa23.38■■□□□ 1.33
TSPAN4-209ENST00000409543 UBE2Q1Q7Z7E8 422 aa23.38■■□□□ 1.33
TSPAN4-209ENST00000409543 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.38■■□□□ 1.332e-6■■■■□ 23.5
TSPAN4-209ENST00000409543 HMX1Q9NP08 348 aaPredicted RBP23.38■■□□□ 1.33
TSPAN4-209ENST00000409543 HELLSQ9NRZ9 838 aa23.38■■□□□ 1.33
TSPAN4-209ENST00000409543 IGKV6D-41A0A0C4DH26 115 aa23.37■■□□□ 1.33
TSPAN4-209ENST00000409543 SLC15A5A6NIM6 579 aa23.37■■□□□ 1.33
TSPAN4-209ENST00000409543 SLC3A2P08195 630 aaKnown RBP23.37■■□□□ 1.33
TSPAN4-209ENST00000409543 PTPREP23469 700 aa23.37■■□□□ 1.33
TSPAN4-209ENST00000409543 TRIM32Q13049 653 aa23.37■■□□□ 1.33
TSPAN4-209ENST00000409543 MAP2K5Q13163 448 aa23.37■■□□□ 1.33
TSPAN4-209ENST00000409543 WDR78Q5VTH9 848 aa23.37■■□□□ 1.33
TSPAN4-209ENST00000409543 APBA2Q99767 749 aa23.37■■□□□ 1.33
TSPAN4-209ENST00000409543 SPATC1LQ9H0A9 340 aa23.37■■□□□ 1.33
TSPAN4-209ENST00000409543 CRISPLD2Q9H0B8 497 aa23.37■■□□□ 1.33
TSPAN4-209ENST00000409543 A0A0G2JMZ2 1700 aa23.36■■□□□ 1.33
TSPAN4-209ENST00000409543 FOXP2O15409 715 aa23.36■■□□□ 1.33
TSPAN4-209ENST00000409543 PRDM1O75626 825 aa23.36■■□□□ 1.33
TSPAN4-209ENST00000409543 TFRCP02786 760 aaKnown RBP23.36■■□□□ 1.33
TSPAN4-209ENST00000409543 ZKSCAN1P17029 563 aaPredicted RBP23.36■■□□□ 1.33
TSPAN4-209ENST00000409543 PDE4BQ07343 736 aa23.36■■□□□ 1.33
TSPAN4-209ENST00000409543 PPARAQ07869 468 aa23.36■■□□□ 1.33
TSPAN4-209ENST00000409543 MAP3K21Q5TCX8 1036 aa23.36■■□□□ 1.33
TSPAN4-209ENST00000409543 SHCBP1Q8NEM2 672 aa23.36■■□□□ 1.33
TSPAN4-209ENST00000409543 ATG4CQ96DT6 458 aa23.36■■□□□ 1.33
TSPAN4-209ENST00000409543 MOV10L1Q9BXT6 1211 aaKnown RBP23.36■■□□□ 1.33
TSPAN4-209ENST00000409543 OSBPL3Q9H4L5 887 aa23.36■■□□□ 1.33
TSPAN4-209ENST00000409543 IVNS1ABPQ9Y6Y0 642 aa23.36■■□□□ 1.33
TSPAN4-209ENST00000409543 GRB14Q14449 540 aa23.35■■□□□ 1.33
TSPAN4-209ENST00000409543 PLEKHM2Q8IWE5 1019 aa23.35■■□□□ 1.33
TSPAN4-209ENST00000409543 ADAMTS5Q9UNA0 930 aa23.35■■□□□ 1.33
TSPAN4-209ENST00000409543 PARP14Q460N5 1801 aa23.34■■□□□ 1.33
TSPAN4-209ENST00000409543 TRIM6-TRIM34B2RNG4 842 aa23.34■■□□□ 1.33
TSPAN4-209ENST00000409543 HOXC6P09630 235 aa23.34■■□□□ 1.33
TSPAN4-209ENST00000409543 PRKAR2AP13861 404 aaKnown RBP23.34■■□□□ 1.33
TSPAN4-209ENST00000409543 CCL14Q16627 93 aa23.34■■□□□ 1.33
TSPAN4-209ENST00000409543 MCMDC2Q4G0Z9 681 aa23.34■■□□□ 1.33
TSPAN4-209ENST00000409543 MKL1Q969V6 931 aa23.34■■□□□ 1.33
TSPAN4-209ENST00000409543 FAM227BQ96M60 508 aa23.34■■□□□ 1.33
TSPAN4-209ENST00000409543 MTMR4Q9NYA4 1195 aa23.34■■□□□ 1.33
TSPAN4-209ENST00000409543 CLIP2Q9UDT6 1046 aa23.34■■□□□ 1.33
TSPAN4-209ENST00000409543 PLIN4Q96Q06 1357 aa23.33■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms